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TMEM9B
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  • TMEM9B
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:59.7 nTPM
FANTOM5:74.6 Scaled Tags Per Million
Pig:27.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA037784
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 59.7
Samples: 246

Max nTPM: 98.2
Min nTPM: 37.3
Std nTPM: 12.2
Median nTPM: 57.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 98.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 94.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 93.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 91.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 89.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 88.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 87.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 85.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 85.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 85.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 84.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 84.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 84.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 83.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 82.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 80.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 80.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 79.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 78.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 78.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 78.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 77.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 77.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 76.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 75.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 73.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 73.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 72.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 72.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 72.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 71.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 71.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 71.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 71.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 71.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 70.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 70.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 70.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 70.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 69.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 69.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 68.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 68.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 67.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 67.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 67.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 66.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 66.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 65.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 65.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 65.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 65.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 65.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 65.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 64.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 64.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 64.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 64.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 64.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 64.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 64.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 63.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 63.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 63.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 63.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 62.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 62.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 62.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 62.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 62.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 62.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 62.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 62.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 62.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 60.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 60.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 60.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 59.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 59.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 59.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 59.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 58.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 58.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 58.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 57.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 57.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 57.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 57.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 57.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 57.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 56.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 56.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 56.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 56.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 55.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 55.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 55.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 55.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 55.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 55.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 55.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 55.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 55.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 55.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 54.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 54.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 54.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 54.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 54.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 54.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 54.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 53.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 53.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 53.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 53.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 53.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 52.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 52.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 52.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 52.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 52.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 51.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 51.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 51.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 51.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 51.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 51.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 51.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 50.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 50.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 50.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 50.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 50.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 50.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 50.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 49.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 49.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 49.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 49.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 49.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 48.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 48.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 48.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 48.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 48.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 47.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 47.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 47.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 47.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 47.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 47.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 46.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 46.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 46.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 46.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 45.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 45.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 45.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 45.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 45.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 45.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 45.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 44.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 44.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 43.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 43.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 43.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 41.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 39.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 39.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 39.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 38.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 37.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

74.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.6
FF:10164-103B2 76 years, female 74.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.4
Pig sample Sample description nTPM
Caudate
nTPM: 27.4
Samples: 4

Max nTPM: 31.2
Min nTPM: 21.3
Sample A Female 21.3
Sample B Female 31.2
Sample C Male 30.7
Sample D Male 26.2

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