We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TOMM5
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • TOMM5
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:80.7 nTPM
HPA Brain:48.4 nTPM
GTEx:80.7 nTPM
Pig:133.7 nTPM

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 48.4
2226 Male, age 75, left hemisphere 60.2
1961 Female, age 42, unknown 36.6
Dorsomedial nucleus
nTPM: 37.9
2041 Female, age 72, unknown 46.9
1989 Male, age 62, unknown 37.0
2017 Female, age 42, unknown 29.7
Lateral hypothalamic area
nTPM: 46.4
1791 Male, age 80, right hemisphere 52.6
2228 Male, age 66, unknown 50.8
2271 Male, age 75, both hemispheres 46.6
2412 Male, age 62, unknown 35.4
Mammillary body
nTPM: 40.6
1923 Female, age 72, unknown 53.6
2413 Male, age 66, unknown 42.0
1948 Female, age 72, unknown 39.6
1945 Male, age 80, right hemisphere 38.0
1834 Female, age 42, unknown 29.9
Paraventricular nucleus
nTPM: 34.5
2700 Male, age 62, unknown 34.5
Preoptic area
nTPM: 38.6
1907 Male, age 80, right hemisphere 48.8
1861 Female, age 42, unknown 34.1
2414 Female, age 72, unknown 33.0
Supraoptic nucleus
nTPM: 39.9
1894 Female, age 72, unknown 49.9
2835 Female, age 72, unknown 35.2
2043 Male, age 62, unknown 34.7
Ventromedial nucleus
nTPM: 36.4
1982 Female, age 72, unknown 37.7
1822 Female, age 42, unknown 35.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 80.7
Samples: 202

Max nTPM: 185.0
Min nTPM: 37.2
Std nTPM: 21.1
Median nTPM: 77.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 185.0
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 154.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 152.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 150.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 134.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 128.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 124.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 118.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 117.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 116.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 114.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 112.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 111.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 111.5
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 109.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 109.0
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 108.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 107.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 107.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 107.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 105.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 105.2
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 105.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 104.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 104.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 104.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 104.0
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 103.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 102.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 101.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 101.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 100.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 100.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 99.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 99.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 97.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 96.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 96.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 96.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 96.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 95.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 95.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 94.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 94.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 94.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 93.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 93.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 92.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 92.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 92.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 91.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 91.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 91.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 90.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 90.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 89.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 89.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 88.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 88.5
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 88.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 88.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 86.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 86.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 86.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 86.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 86.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 86.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 85.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 85.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 85.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 85.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 85.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 84.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 83.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 83.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 82.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 82.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 82.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 81.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 81.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 81.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 81.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 81.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 81.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 80.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 80.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 80.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 80.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 80.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 80.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 80.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 79.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 79.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 79.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 79.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 79.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 78.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 78.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 77.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 77.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 77.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 77.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 77.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 77.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 76.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 76.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 76.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 76.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 76.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 75.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 75.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 75.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 75.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 75.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 75.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 74.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 74.8
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 74.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 73.9
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 73.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 73.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 73.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 73.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 73.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 73.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 73.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 73.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 72.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 71.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 71.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 71.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 70.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 70.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 70.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 70.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 70.0
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 69.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 69.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 69.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 69.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 69.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 68.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 68.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 68.5
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 68.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.1
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 67.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 67.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 67.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 66.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 66.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 66.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 66.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 66.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 66.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 66.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 65.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 65.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 64.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 64.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 64.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 64.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 64.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 63.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 63.2
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 63.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 63.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 63.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 62.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 62.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 62.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 61.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 61.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 60.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 59.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 58.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 58.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 58.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 58.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 58.2
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 57.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 57.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 55.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 54.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 54.4
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 53.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 53.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 52.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 52.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 51.8
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 51.8
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 51.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 50.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 49.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 46.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 43.8
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 41.9
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 39.4
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 37.2
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 133.7
Samples: 4

Max nTPM: 186.4
Min nTPM: 95.3
Sample A Female 186.4
Sample B Female 134.5
Sample C Male 118.6
Sample D Male 95.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org