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ZSCAN2
HPA
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  • SUMMARY

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  • BRAIN

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  • ZSCAN2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ZSCAN2
Synonyms FLJ20595, ZFP29, ZNF854
Gene descriptioni

Full gene name according to HGNC.

Zinc finger and SCAN domain containing 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transcription factors
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q25.2
Chromosome location (bp) 84600986 - 84627796
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

13
Ensembl ENSG00000176371 (version 109)
Entrez gene 54993
HGNC HGNC:20994
UniProt Q7Z7L9 (UniProt - Evidence at transcript level)
neXtProt NX_Q7Z7L9
GeneCards ZSCAN2
Antibodypedia ZSCAN2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein, DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Spermatogenesis, Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene contains several copies of zinc finger motif, which is commonly found in transcriptional regulatory proteins. Studies in mice show that this gene is expressed during embryonic development, and specifically in the testis in adult mice, suggesting that it may play a role in regulating genes in germ cells. Alternative splicing of this gene results in several transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ZSCAN2-202
ENSP00000325123
ENST00000327179
A0A0C4DFQ3
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
Show all
613 aa
69.5 kDa
No 0
ZSCAN2-203
ENSP00000333895
ENST00000334141
Q7Z7L9
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
A0A024RC69
[Target identity:100%; Query identity:100%] Zinc finger and SCAN domain containing 2, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000977 [RNA polymerase II transcription regulatory region sequence-specific DNA binding]
GO:0000981 [DNA-binding transcription factor activity, RNA polymerase II-specific]
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007283 [spermatogenesis]
GO:0030154 [cell differentiation]
GO:0046872 [metal ion binding]
Show all
150 aa
16.7 kDa
No 0
ZSCAN2-204
ENSP00000351257
ENST00000358472
F8W6Y9
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
464 aa
52.6 kDa
No 0
ZSCAN2-205
ENSP00000368663
ENST00000379358
Q7Z7L9
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000977 [RNA polymerase II transcription regulatory region sequence-specific DNA binding]
GO:0000981 [DNA-binding transcription factor activity, RNA polymerase II-specific]
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007283 [spermatogenesis]
GO:0030154 [cell differentiation]
GO:0046872 [metal ion binding]
Show all
146 aa
16.3 kDa
No 0
ZSCAN2-206
ENSP00000439584
ENST00000442073
F5H1K4
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
32 aa
3.6 kDa
No 0
ZSCAN2-207
ENSP00000410198
ENST00000448803
Q7Z7L9
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000977 [RNA polymerase II transcription regulatory region sequence-specific DNA binding]
GO:0000981 [DNA-binding transcription factor activity, RNA polymerase II-specific]
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007283 [spermatogenesis]
GO:0030154 [cell differentiation]
GO:0046872 [metal ion binding]
Show all
614 aa
69.5 kDa
No 0
ZSCAN2-208
ENSP00000440004
ENST00000485222
F5GY18
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
Show all
200 aa
22.6 kDa
No 0
ZSCAN2-209
ENSP00000438628
ENST00000502939
F5H2D8
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
27 aa
3 kDa
No 0
ZSCAN2-210
ENSP00000439132
ENST00000538076
F5H3F3
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
Show all
238 aa
26.6 kDa
No 0
ZSCAN2-212
ENSP00000446041
ENST00000540936
F5H4P1
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
Show all
107 aa
12.1 kDa
No 0
ZSCAN2-213
ENSP00000441342
ENST00000541040
F5GZ04
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
Show all
210 aa
23.7 kDa
No 0
ZSCAN2-214
ENSP00000445451
ENST00000546148
Q7Z7L9
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000977 [RNA polymerase II transcription regulatory region sequence-specific DNA binding]
GO:0000981 [DNA-binding transcription factor activity, RNA polymerase II-specific]
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0007283 [spermatogenesis]
GO:0030154 [cell differentiation]
GO:0046872 [metal ion binding]
Show all
614 aa
69.5 kDa
No 0
ZSCAN2-215
ENSP00000442693
ENST00000546275
F5H789
[Direct mapping] Zinc finger and SCAN domain-containing protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
53 aa
6 kDa
No 0

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