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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:24.4 nTPM
HPA Brain:41.4 nTPM
GTEx:24.4 nTPM
FANTOM5:158.9 Scaled Tags Per Million
Pig:76.6 nTPM
Mouse:58.1 nTPM
Allen mouse:19.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057321
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 40.0
2290 Female, age 72, unknown 48.4
1854 Male, age 80, left hemisphere 45.0
1857 Female, age 85, left hemisphere 44.7
2289 Male, age 61, right hemisphere 42.6
1781 Male, age 74, unknown 40.9
2846 Female, age 79, unknown 38.4
2288 Male, age 75, left hemisphere 34.8
2481 Female, age 94, left hemisphere 25.6
Globus pallidus, externus
nTPM: 15.8
2772 Female, age 79, unknown 28.0
2395 Male, age 75, both hemispheres 13.3
2646 Male, age 61, right hemisphere 13.2
2567 Female, age 72, unknown 12.8
1996 Male, age 80, right hemisphere 11.8
Globus pallidus, internus
nTPM: 14.0
1818 Male, age 74, unknown 20.5
2483 Female, age 94, right hemisphere 18.2
2566 Female, age 72, unknown 14.3
2037 Male, age 80, right hemisphere 13.4
2287 Male, age 75, right hemisphere 10.8
2778 Female, age 91, both hemispheres 10.7
2111 Female, age 85, right hemisphere 10.2
Nucleus accumbens
nTPM: 41.4
1856 Female, age 91, right hemisphere 59.0
2824 Male, age 61, right hemisphere 54.3
1806 Female, age 85, left hemisphere 52.3
1783 Male, age 74, unknown 51.1
2698 Female, age 72, unknown 39.4
2286 Male, age 75, left hemisphere 36.1
2732 Male, age 80, right hemisphere 22.5
2391 Female, age 94, left hemisphere 16.5
Nucleus basalis of Meynert
nTPM: 28.4
2484 Female, age 94, left hemisphere 37.3
2393 Male, age 80, right hemisphere 34.8
2821 Male, age 75, both hemispheres 26.4
2569 Male, age 61, both hemispheres 14.9
Nucleus of the diagonal band
nTPM: 40.1
2775 Male, age 80, right hemisphere 44.5
1812 Female, age 91, both hemispheres 42.5
2029 Male, age 61, right hemisphere 41.5
2195 Female, age 85, both hemispheres 39.0
1979 Male, age 74, unknown 32.8
Putamen
nTPM: 38.6
1838 Male, age 80, right hemisphere 55.2
1937 Female, age 91, right hemisphere 47.9
2466 Female, age 79, unknown 43.4
1829 Male, age 74, unknown 39.2
2489 Female, age 72, unknown 33.7
2647 Male, age 75, left hemisphere 28.0
2482 Female, age 94, left hemisphere 23.0
Septal nuclei
nTPM: 34.8
1960 Male, age 74, unknown 44.8
2629 Female, age 94, right hemisphere 40.9
2009 Female, age 91, both hemispheres 37.1
2031 Female, age 72, unknown 34.2
2394 Male, age 61, left hemisphere 31.5
2059 Female, age 85, both hemispheres 30.3
2199 Male, age 80, right hemisphere 25.0
Stria terminalis, bed nucleus
nTPM: 40.8
1974 Female, age 91, both hemispheres 46.0
2486 Female, age 94, both hemispheres 44.3
2201 Male, age 74, unknown 32.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 19.6
Samples: 246

Max nTPM: 52.0
Min nTPM: 2.5
Std nTPM: 11.4
Median nTPM: 18.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 52.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 42.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 42.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 42.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 41.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 41.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 41.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 40.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 40.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 39.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 38.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 38.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 38.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 38.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 37.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 37.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 35.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 35.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 35.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 34.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 34.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 34.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 34.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 33.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 33.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 32.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 32.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 32.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 32.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 32.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 32.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 31.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 31.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 31.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 31.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 31.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 31.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 31.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 31.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 31.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 30.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 30.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 30.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 30.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 30.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 30.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 29.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 29.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 29.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 29.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 29.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 29.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 28.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 28.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 28.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 28.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 28.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 28.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 27.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 27.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 27.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 27.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 26.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 26.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 26.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 25.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 25.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 25.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 25.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 25.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 25.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 25.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 25.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 24.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 24.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 24.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 24.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 24.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 24.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 24.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 24.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 24.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 23.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 23.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 23.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 23.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 23.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 23.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 23.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 23.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 23.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 22.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 22.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 22.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 22.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 22.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 22.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 21.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 21.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 20.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 20.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 20.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 20.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 19.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 19.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 19.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 19.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 19.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 19.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 19.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 19.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 18.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 17.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 17.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 17.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 17.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 17.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 16.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 16.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 16.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 16.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 16.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 16.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 16.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 16.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 15.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 15.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 15.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 15.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 15.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 15.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 14.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 14.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 14.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 14.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 13.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 13.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 13.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 13.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 12.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 12.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 12.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 12.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 12.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 12.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 12.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 12.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 12.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 11.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 11.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 11.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 10.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 10.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 10.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 10.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 10.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 9.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 9.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 9.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 9.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 9.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 9.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 9.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 8.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 8.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 8.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 8.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 8.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 8.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 8.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 8.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 8.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 8.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 8.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 8.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 8.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 7.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 7.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 7.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 7.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 7.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 7.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 7.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 7.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 7.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 7.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 7.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 7.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 7.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 7.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 6.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 6.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 6.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 6.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 6.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 6.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 6.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 5.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 5.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 5.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 5.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 5.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 5.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 5.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 5.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 4.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 3.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 3.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 3.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 3.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 3.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 24.4
Samples: 246

Max nTPM: 58.6
Min nTPM: 2.4
Std nTPM: 12.4
Median nTPM: 24.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 58.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 57.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 52.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 52.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 50.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 49.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 48.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 48.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 47.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 47.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 46.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 46.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 46.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 45.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 44.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 44.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 44.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 43.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 43.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 42.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 42.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 41.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 41.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 40.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 40.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 39.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 39.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 39.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 39.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 38.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 38.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 38.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 38.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 38.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 38.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 38.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 37.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 37.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 37.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 36.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 36.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 36.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 35.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 35.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 35.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 35.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 35.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 35.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 35.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 35.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 34.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 34.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 34.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 34.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 34.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 34.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 34.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 34.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 34.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 34.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 33.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 33.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 33.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 33.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 33.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 33.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 33.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 33.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 33.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 33.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 33.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 32.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 32.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 32.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 32.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 31.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 31.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 31.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 30.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 30.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 30.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 30.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 30.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 30.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 29.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 29.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 29.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 29.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 29.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 29.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 29.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 29.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 28.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 28.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 28.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 28.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 28.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 28.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 28.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 28.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 26.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 26.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 26.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 26.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 26.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 26.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 26.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 25.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 25.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 25.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 25.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 25.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 25.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 25.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 24.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 24.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 24.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 24.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 24.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 24.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 24.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 24.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 24.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 24.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 24.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 24.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 23.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 23.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 23.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 23.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 23.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 23.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 23.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 23.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 23.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 22.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 22.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 22.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 22.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 22.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 21.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 21.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 21.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 21.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 21.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 21.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 20.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 20.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 20.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 20.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 20.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 20.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 19.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 19.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 19.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 19.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 18.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 18.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 18.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 18.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 18.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 18.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 18.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 18.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 17.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 16.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 16.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 16.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 16.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 16.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 16.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 15.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 15.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 15.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 15.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 15.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 15.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 15.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 14.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 14.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 14.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 14.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 14.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 13.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 13.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 13.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 12.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 12.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 12.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 12.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 12.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 12.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 12.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 11.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 11.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 11.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 10.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 10.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 10.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 10.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 10.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 9.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 9.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 9.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 9.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 9.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 9.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 9.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 9.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 8.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 8.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 8.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 7.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 7.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 7.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 7.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 7.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 6.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 6.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 6.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 6.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 6.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 6.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 6.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 5.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 5.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 5.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 5.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 5.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 5.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 5.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 3.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 3.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 2.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.4
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Brain - Putamen (basal ganglia)
Average nTPM: 17.8
Samples: 205

Max nTPM: 45.4
Min nTPM: 2.3
Std nTPM: 10.5
Median nTPM: 15.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 45.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 42.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 40.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 40.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 39.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 39.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 38.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 38.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 37.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 37.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 36.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 36.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 34.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 34.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 33.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 33.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 33.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 32.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 32.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 32.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 31.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 31.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 31.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 31.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 31.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 31.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 30.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 30.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 30.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 30.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 29.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 28.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 28.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 28.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 28.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 28.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 27.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 27.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 27.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 26.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 26.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 25.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 25.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 25.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 25.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 25.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 24.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 24.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 24.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 24.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 24.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 24.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 23.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 23.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 23.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 23.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 23.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 22.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 22.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 22.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 21.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 21.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 21.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 21.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 21.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 21.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 20.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 20.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 20.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 20.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 20.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 20.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 20.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 20.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 19.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 19.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 19.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 19.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 19.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 19.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 18.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 18.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 17.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 17.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 17.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 17.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 17.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 17.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 17.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 16.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 16.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 16.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 16.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 16.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 15.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 15.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 15.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 15.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 14.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 14.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 14.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 14.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 14.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 13.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 13.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 13.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 13.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 13.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 13.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 13.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 13.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 13.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 13.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 13.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 13.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 13.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 13.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 12.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 12.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 12.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 11.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 11.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 11.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 11.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 11.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 10.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 10.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 10.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 9.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 9.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 9.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 9.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 9.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 9.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 8.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 8.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 8.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 8.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 7.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 7.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 7.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 7.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 6.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 6.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 6.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 6.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 6.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 6.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 6.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 5.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 5.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 5.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 5.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 5.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 5.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 5.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 5.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 4.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 4.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 4.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 3.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 3.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 3.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 3.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

158.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 135.9
FF:10164-103B2 76 years, female 135.9
Nucleus accumbens
Scaled Tags Per Million: 112.8
FF:10037-101F1 23-56 years, mixed 112.8
Putamen
Scaled Tags Per Million: 158.9
FF:10176-103C5 60 years, female 158.9
Globus pallidus
Scaled Tags Per Million: 45.1
FF:10161-103A8 76 years, female 52.5
FF:10175-103C4 60 years, female 37.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.6
Pig sample Sample description nTPM
Caudate
nTPM: 76.6
Samples: 4

Max nTPM: 96.1
Min nTPM: 55.3
Sample A Female 55.3
Sample B Female 76.1
Sample C Male 96.1
Sample D Male 78.9
Putamen
nTPM: 76.6
Samples: 4

Max nTPM: 100.5
Min nTPM: 37.3
Sample A Female 37.3
Sample B Female 72.9
Sample C Male 100.5
Sample D Male 95.7
Septum
nTPM: 47.0
Samples: 4

Max nTPM: 53.4
Min nTPM: 39.3
Sample A Female 53.4
Sample B Female 51.2
Sample C Male 39.3
Sample D Male 44.2
Ventral pallidum
nTPM: 58.6
Samples: 4

Max nTPM: 60.2
Min nTPM: 57.8
Sample A Female 60.2
Sample B Female 57.9
Sample C Male 57.8
Sample D Male 58.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 58.1
Samples: 4

Max nTPM: 70.3
Min nTPM: 49.2
Sample A Male 63.3
Sample B Male 70.3
Sample C Female 49.2
Sample D Female 49.6
Septum
nTPM: 28.0
Samples: 4

Max nTPM: 31.7
Min nTPM: 23.7
Sample A Male 31.7
Sample B Male 23.7
Sample C Female 26.6
Sample D Female 29.9
Ventral forebrain
nTPM: 41.5
Samples: 4

Max nTPM: 44.6
Min nTPM: 39.2
Sample A Male 44.6
Sample B Male 39.4
Sample C Female 42.9
Sample D Female 39.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.3
73606648 Antisense, RP_051130_01_C12, Mouse strain C57BL/6J (56 days, male) 19.3
Pallidum
Expression energy: 11.4
73606648 Antisense, RP_051130_01_C12, Mouse strain C57BL/6J (56 days, male) 11.4

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