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EFCAB5
HPA
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  • EFCAB5
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

EFCAB5
Synonyms FLJ46247
Gene descriptioni

Full gene name according to HGNC.

EF-hand calcium binding domain 5
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q11.2
Chromosome location (bp) 29929200 - 30108452
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000176927 (version 109)
Entrez gene 374786
HGNC HGNC:24801
UniProt A4FU69 (UniProt - Evidence at protein level)
neXtProt NX_A4FU69
GeneCards EFCAB5
Antibodypedia EFCAB5 antibodies


PROTEIN FUNCTION
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
EFCAB5-201
ENSP00000378312
ENST00000394835
A4FU69
[Direct mapping] EF-hand calcium-binding domain-containing protein 5
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005509 [calcium ion binding]
GO:0046872 [metal ion binding]
Show all
1503 aa
173.4 kDa
No 0
EFCAB5-202
ENSP00000417009
ENST00000419434
H0Y843
[Direct mapping] EF-hand calcium-binding domain-containing protein 5
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
1185 aa
136.8 kDa
No 0
EFCAB5-206
ENSP00000400023
ENST00000448319
C9J1E6
[Direct mapping] EF-hand calcium-binding domain-containing protein 5
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
103 aa
11.9 kDa
No 0
EFCAB5-208
ENSP00000440619
ENST00000536908
A4FU69
[Direct mapping] EF-hand calcium-binding domain-containing protein 5
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005509 [calcium ion binding]
GO:0046872 [metal ion binding]
Show all
856 aa
99 kDa
No 0
EFCAB5-212
ENSP00000465109
ENST00000588978
K7EJC3
[Direct mapping] EF-hand calcium-binding domain-containing protein 5
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005509 [calcium ion binding]
Show all
774 aa
89.5 kDa
No 0
EFCAB5-213
ENSP00000492792
ENST00000638539
H0Y4M1
[Direct mapping] EF-hand calcium-binding domain-containing protein 5
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
56 aa
6.3 kDa
No 0

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