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LY6H
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  • LY6H
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:170.6 nTPM
HPA Brain:100.0 nTPM
GTEx:170.6 nTPM
FANTOM5:74.9 Scaled Tags Per Million
Pig:71.6 nTPM
Mouse:355.7 nTPM
Allen mouse:9.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA077218
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 14.9
1781 Male, age 74, unknown 35.8
1854 Male, age 80, left hemisphere 18.6
1857 Female, age 85, left hemisphere 12.6
2288 Male, age 75, left hemisphere 11.7
2481 Female, age 94, left hemisphere 11.2
2290 Female, age 72, unknown 10.7
2846 Female, age 79, unknown 9.8
2289 Male, age 61, right hemisphere 9.1
Globus pallidus, externus
nTPM: 5.2
2646 Male, age 61, right hemisphere 7.4
2772 Female, age 79, unknown 6.0
2395 Male, age 75, both hemispheres 5.5
2567 Female, age 72, unknown 5.2
1996 Male, age 80, right hemisphere 2.2
Globus pallidus, internus
nTPM: 6.8
1818 Male, age 74, unknown 12.9
2566 Female, age 72, unknown 11.0
2483 Female, age 94, right hemisphere 10.0
2287 Male, age 75, right hemisphere 4.7
2037 Male, age 80, right hemisphere 4.0
2111 Female, age 85, right hemisphere 3.1
2778 Female, age 91, both hemispheres 1.8
Nucleus accumbens
nTPM: 22.3
1856 Female, age 91, right hemisphere 65.4
1806 Female, age 85, left hemisphere 28.5
2732 Male, age 80, right hemisphere 20.0
2698 Female, age 72, unknown 19.8
2824 Male, age 61, right hemisphere 13.1
2286 Male, age 75, left hemisphere 12.9
1783 Male, age 74, unknown 12.2
2391 Female, age 94, left hemisphere 6.8
Nucleus basalis of Meynert
nTPM: 11.7
2393 Male, age 80, right hemisphere 13.0
2484 Female, age 94, left hemisphere 11.7
2821 Male, age 75, both hemispheres 11.5
2569 Male, age 61, both hemispheres 10.8
Nucleus of the diagonal band
nTPM: 92.6
1812 Female, age 91, both hemispheres 148.7
2195 Female, age 85, both hemispheres 118.3
2775 Male, age 80, right hemisphere 68.9
2029 Male, age 61, right hemisphere 64.7
1979 Male, age 74, unknown 62.3
Putamen
nTPM: 19.4
1937 Female, age 91, right hemisphere 59.9
1838 Male, age 80, right hemisphere 27.4
2466 Female, age 79, unknown 19.6
2482 Female, age 94, left hemisphere 11.2
2647 Male, age 75, left hemisphere 7.4
1829 Male, age 74, unknown 5.7
2489 Female, age 72, unknown 4.5
Septal nuclei
nTPM: 72.2
2009 Female, age 91, both hemispheres 131.0
1960 Male, age 74, unknown 101.6
2031 Female, age 72, unknown 78.8
2629 Female, age 94, right hemisphere 61.5
2059 Female, age 85, both hemispheres 60.3
2199 Male, age 80, right hemisphere 41.8
2394 Male, age 61, left hemisphere 30.4
Stria terminalis, bed nucleus
nTPM: 100.0
1974 Female, age 91, both hemispheres 153.4
2486 Female, age 94, both hemispheres 76.8
2201 Male, age 74, unknown 69.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 90.7
Samples: 246

Max nTPM: 252.7
Min nTPM: 25.5
Std nTPM: 39.2
Median nTPM: 85.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 252.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 247.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 228.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 226.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 188.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 181.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 176.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 173.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 169.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 168.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 164.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 163.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 161.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 159.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 158.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 157.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 152.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 150.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 149.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 146.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 143.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 143.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 143.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 143.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 142.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 141.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 140.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 138.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 138.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 133.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 129.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 127.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 126.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 125.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 123.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 123.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 123.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 123.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 123.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 122.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 122.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 122.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 121.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 121.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 121.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 120.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 118.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 118.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 118.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 117.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 117.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 117.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 117.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 115.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 113.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 112.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 111.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 111.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 110.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 110.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 110.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 110.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 110.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 110.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 110.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 110.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 107.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 107.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 107.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 106.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 106.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 105.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 104.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 104.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 104.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 104.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 103.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 102.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 102.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 102.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 101.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 101.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 100.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 98.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 98.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 97.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 96.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 96.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 96.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 95.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 95.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 95.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 95.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 94.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 93.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 93.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 92.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 92.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 92.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 92.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 92.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 92.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 91.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 91.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 91.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 89.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 88.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 88.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 88.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 87.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 87.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 87.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 86.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 86.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 85.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 85.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 85.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 85.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 85.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 85.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 84.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 84.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 84.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 83.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 82.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 82.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 82.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 82.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 82.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 81.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 80.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 79.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 79.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 79.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 78.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 78.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 78.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 78.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 77.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 77.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 77.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 77.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 77.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 76.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 76.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 76.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 75.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 75.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 74.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 73.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 73.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 73.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 72.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 71.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 71.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 70.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 70.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 70.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 70.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 69.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 69.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 69.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 69.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 69.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 68.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 66.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 66.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 65.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 65.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 65.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 64.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 62.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 62.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 61.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 60.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 60.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 60.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 59.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 59.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 58.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 58.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 57.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 56.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 55.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 55.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 53.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 51.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 50.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 50.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 48.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 48.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 48.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 48.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 47.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 46.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 46.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 46.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 45.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 44.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 43.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 43.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 43.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 41.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 41.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 41.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 39.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 37.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 36.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 34.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 32.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 30.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 26.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 25.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 170.6
Samples: 246

Max nTPM: 723.4
Min nTPM: 11.0
Std nTPM: 84.5
Median nTPM: 158.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 723.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 440.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 408.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 404.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 384.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 371.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 333.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 328.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 327.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 326.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 324.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 315.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 311.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 308.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 303.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 303.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 301.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 292.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 289.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 287.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 287.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 286.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 274.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 273.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 269.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 261.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 259.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 258.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 258.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 258.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 258.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 257.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 257.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 257.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 255.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 255.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 249.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 248.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 246.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 246.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 245.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 245.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 239.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 239.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 239.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 238.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 236.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 230.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 230.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 229.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 228.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 226.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 225.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 224.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 224.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 223.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 222.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 221.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 218.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 216.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 214.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 213.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 213.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 212.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 212.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 212.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 212.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 211.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 211.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 209.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 208.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 208.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 206.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 205.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 201.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 201.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 199.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 198.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 197.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 197.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 197.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 196.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 195.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 195.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 194.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 194.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 192.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 191.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 191.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 189.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 188.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 187.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 186.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 184.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 184.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 184.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 183.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 182.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 182.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 181.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 179.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 178.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 177.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 177.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 175.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 174.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 173.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 173.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 169.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 165.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 165.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 165.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 164.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 164.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 163.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 163.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 162.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 161.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 160.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 160.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 159.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 159.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 159.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 158.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 157.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 157.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 156.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 154.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 154.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 154.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 153.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 153.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 152.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 150.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 150.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 150.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 149.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 149.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 149.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 149.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 147.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 146.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 146.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 146.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 145.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 144.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 142.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 142.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 142.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 141.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 140.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 140.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 140.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 138.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 138.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 137.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 137.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 136.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 136.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 136.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 135.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 134.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 133.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 127.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 125.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 124.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 124.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 124.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 124.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 122.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 122.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 121.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 119.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 119.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 119.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 118.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 117.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 117.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 115.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 115.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 113.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 113.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 112.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 110.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 110.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 110.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 110.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 108.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 107.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 106.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 105.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 105.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 104.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 103.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 102.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 102.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 101.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 101.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 101.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 101.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 100.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 98.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 96.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 96.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 96.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 93.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 92.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 92.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 91.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 91.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 87.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 87.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 86.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 82.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 81.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 80.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 80.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 77.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 77.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 77.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 74.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 74.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 73.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 72.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 71.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 70.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 70.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 69.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 68.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 67.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 67.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 67.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 60.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 59.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 57.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 55.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 54.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 48.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 46.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 39.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 38.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 33.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 11.0
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Brain - Putamen (basal ganglia)
Average nTPM: 79.8
Samples: 205

Max nTPM: 269.2
Min nTPM: 11.8
Std nTPM: 36.9
Median nTPM: 77.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 269.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 213.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 166.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 163.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 162.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 159.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 157.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 155.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 154.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 154.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 154.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 144.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 143.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 138.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 136.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 135.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 133.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 133.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 130.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 129.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 127.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 127.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 123.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 118.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 118.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 117.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 116.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 116.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 115.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 114.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 110.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 110.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 110.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 110.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 109.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 109.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 107.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 107.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 107.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 106.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 105.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 104.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 103.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 103.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 102.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 101.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 101.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 101.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 100.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 100.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 100.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 99.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 98.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 97.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 95.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 95.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 94.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 94.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 94.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 93.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 92.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 92.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 92.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 91.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 91.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 90.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 89.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 89.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 88.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 88.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 88.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 88.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 87.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 87.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 87.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 86.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 86.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 85.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 85.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 85.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 84.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 84.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 84.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 84.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 84.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 84.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 83.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 83.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 83.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 83.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 81.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 81.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 81.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 80.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 80.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 79.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 79.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 79.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 78.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 78.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 77.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 75.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 75.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 74.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 74.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 74.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 73.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 73.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 72.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 71.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 71.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 71.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 71.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 70.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 70.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 69.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 69.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 69.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 69.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 68.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 68.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 67.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 67.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 67.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 67.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 66.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 65.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 65.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 65.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 64.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 64.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 64.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 64.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 64.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 63.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 63.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 62.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 62.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 61.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 61.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 60.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 58.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 57.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 56.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 56.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 55.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 55.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 55.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 54.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 54.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 54.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 53.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 53.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 52.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 52.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 51.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 51.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 51.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 51.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 50.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 50.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 49.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 48.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 46.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 44.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 43.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 43.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 42.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 42.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 41.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 40.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 40.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 40.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 40.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 39.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 37.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 36.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 36.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 35.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 34.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 33.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 33.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 32.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 30.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 30.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 29.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 29.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 28.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 28.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 25.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 25.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 23.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 17.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 17.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 16.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

74.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 73.2
FF:10164-103B2 76 years, female 73.2
Nucleus accumbens
Scaled Tags Per Million: 74.9
FF:10037-101F1 23-56 years, mixed 74.9
Putamen
Scaled Tags Per Million: 74.0
FF:10176-103C5 60 years, female 74.0
Globus pallidus
Scaled Tags Per Million: 19.2
FF:10175-103C4 60 years, female 28.2
FF:10161-103A8 76 years, female 10.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.6
Pig sample Sample description nTPM
Caudate
nTPM: 57.9
Samples: 4

Max nTPM: 74.9
Min nTPM: 40.6
Sample A Female 51.3
Sample B Female 74.9
Sample C Male 64.6
Sample D Male 40.6
Putamen
nTPM: 29.9
Samples: 4

Max nTPM: 36.5
Min nTPM: 20.8
Sample A Female 36.5
Sample B Female 32.3
Sample C Male 20.8
Sample D Male 29.9
Septum
nTPM: 71.6
Samples: 4

Max nTPM: 102.3
Min nTPM: 49.3
Sample A Female 71.5
Sample B Female 63.4
Sample C Male 102.3
Sample D Male 49.3
Ventral pallidum
nTPM: 51.8
Samples: 4

Max nTPM: 66.3
Min nTPM: 39.4
Sample A Female 57.2
Sample B Female 39.4
Sample C Male 66.3
Sample D Male 44.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

355.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 95.3
Samples: 4

Max nTPM: 133.6
Min nTPM: 69.4
Sample A Male 92.1
Sample B Male 133.6
Sample C Female 69.4
Sample D Female 86.1
Septum
nTPM: 355.7
Samples: 4

Max nTPM: 407.2
Min nTPM: 305.4
Sample A Male 357.4
Sample B Male 407.2
Sample C Female 352.8
Sample D Female 305.4
Ventral forebrain
nTPM: 193.6
Samples: 4

Max nTPM: 245.7
Min nTPM: 148.1
Sample A Male 219.2
Sample B Male 161.4
Sample C Female 245.7
Sample D Female 148.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.0
70546093 Antisense, RP_050623_03_F01, Mouse strain C57BL/6J (56 days, male) 8.0
71924388 Antisense, RP_050623_03_F01, Mouse strain C57BL/6J (56 days, male) 6.2
Pallidum
Expression energy: 9.4
70546093 Antisense, RP_050623_03_F01, Mouse strain C57BL/6J (56 days, male) 9.4
71924388 Antisense, RP_050623_03_F01, Mouse strain C57BL/6J (56 days, male) 7.7

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