PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:103.1 nTPM
FANTOM5:92.5 Scaled Tags Per Million
Mouse:248.5 nTPM
Allen mouse:2.5 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 103.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 80.3
2188 Female, age 91, both hemispheres 95.1
2090 Male, age 80, both hemispheres 88.3
2301 Female, age 85, both hemispheres 70.5
1984 Male, age 76, both hemispheres 67.4
Area postrema
nTPM: 76.0
2799 Male, age 61, both hemispheres 87.5
2306 Male, age 80, both hemispheres 77.4
2054 Male, age 76, both hemispheres 63.1
Dorsal cochlear nucleus
nTPM: 85.9
2370 Male, age 61, both hemispheres 99.4
2187 Female, age 91, both hemispheres 89.1
2058 Male, age 76, both hemispheres 84.4
2378 Male, age 80, both hemispheres 78.8
2802 Male, age 74, right hemisphere 77.6
Dorsal medullary reticular nucleus
nTPM: 88.3
2040 Female, age 85, both hemispheres 110.6
2373 Male, age 61, both hemispheres 82.6
2088 Male, age 76, both hemispheres 71.7
Dorsal motor vagal complex
nTPM: 80.4
2000 Male, age 74, unknown 96.8
2133 Female, age 91, both hemispheres 90.0
2844 Male, age 55, unknown 88.9
2813 Female, age 72, unknown 82.4
2797 Male, age 61, both hemispheres 77.3
2643 Male, age 74, both hemispheres 76.8
2185 Male, age 76, both hemispheres 73.0
2807 Female, age 85, both hemispheres 58.1
Dorsal tegmental nucleus
nTPM: 90.1
2083 Male, age 80, both hemispheres 107.0
2358 Male, age 61, both hemispheres 96.4
2326 Male, age 74, both hemispheres 85.6
1936 Male, age 76, left hemisphere 71.3
Dorsolateral tegmental area
nTPM: 96.6
2337 Male, age 61, both hemispheres 114.2
2654 Male, age 80, both hemispheres 105.0
2751 Female, age 85, both hemispheres 102.1
2360 Male, age 74, both hemispheres 84.6
2141 Male, age 76, both hemispheres 77.1
Gigantocellular reticular nuclei, medullary
nTPM: 86.5
1876 Female, age 85, both hemispheres 107.0
2022 Male, age 76, right hemisphere 88.0
2387 Female, age 91, both hemispheres 86.8
2314 Male, age 61, both hemispheres 82.6
2462 Male, age 74, both hemispheres 80.5
2310 Male, age 80, both hemispheres 74.2
Gigantocellular reticular nuclei, pars
nTPM: 78.7
2084 Female, age 85, both hemispheres 99.6
2168 Male, age 76, both hemispheres 87.9
2336 Male, age 61, both hemispheres 77.2
2706 Male, age 80, both hemispheres 68.4
2330 Male, age 80, both hemispheres 60.5
Inferior olive
nTPM: 96.6
2563 Male, age 74, both hemispheres 107.6
2085 Female, age 85, both hemispheres 103.3
2178 Male, age 61, both hemispheres 96.8
2628 Female, age 91, both hemispheres 88.7
2379 Male, age 80, both hemispheres 86.7
Kolliker-Fuse nucleus
nTPM: 93.5
2163 Male, age 80, both hemispheres 103.0
2793 Female, age 91, left hemisphere 91.8
2315 Male, age 76, right hemisphere 85.6
Lateral lemniscal nuclei
nTPM: 82.0
2169 Male, age 76, both hemispheres 94.5
2746 Female, age 85, left hemisphere 86.0
2036 Male, age 80, both hemispheres 78.6
2320 Female, age 91, left hemisphere 77.3
2453 Male, age 74, right hemisphere 73.5
Lateral medullary reticular nucleus
nTPM: 96.9
2305 Male, age 74, both hemispheres 106.2
2044 Male, age 76, both hemispheres 99.8
2374 Male, age 61, both hemispheres 97.1
2852 Male, age 80, both hemispheres 96.2
2190 Female, age 85, both hemispheres 95.1
2804 Female, age 91, both hemispheres 87.3
Lateral parabrachial nucleus
nTPM: 91.2
2139 Female, age 85, right hemisphere 99.0
2792 Male, age 76, both hemispheres 97.2
2013 Male, age 80, both hemispheres 86.6
2790 Male, age 61, both hemispheres 81.9
Lateral vestibular nucleus
nTPM: 90.2
2184 Male, age 76, both hemispheres 93.2
2311 Male, age 80, both hemispheres 87.2
Locus coeruleus
nTPM: 99.6
2014 Male, age 55, unknown 117.2
2123 Female, age 91, both hemispheres 105.8
1980 Male, age 76, both hemispheres 99.8
2788 Male, age 74, unknown 99.3
2162 Male, age 80, both hemispheres 95.3
2317 Female, age 72, unknown 91.2
2720 Male, age 74, both hemispheres 88.8
Medial olivary nucleus
nTPM: 91.8
1962 Male, age 76, both hemispheres 99.7
1943 Male, age 61, both hemispheres 92.0
2138 Female, age 91, both hemispheres 89.0
2851 Male, age 80, both hemispheres 86.4
Medial parabrachial nucleus
nTPM: 91.1
2170 Female, age 91, both hemispheres 107.7
2854 Male, age 80, both hemispheres 93.4
2786 Male, age 76, both hemispheres 92.9
2156 Male, age 61, both hemispheres 82.0
2463 Female, age 85, right hemisphere 79.7
Medial periolivary nuclei
nTPM: 82.8
2063 Male, age 76, both hemispheres 96.7
2791 Male, age 74, right hemisphere 86.6
2171 Female, age 85, both hemispheres 80.0
2081 Male, age 80, both hemispheres 77.3
2458 Female, age 91, both hemispheres 73.3
Medial vestibular nucleus
nTPM: 93.7
2801 Male, age 74, both hemispheres 98.4
2743 Female, age 85, both hemispheres 97.5
2803 Female, age 91, both hemispheres 95.4
2624 Male, age 61, both hemispheres 90.8
2134 Male, age 76, both hemispheres 90.6
2093 Male, age 80, both hemispheres 89.6
Motor facial nucleus
nTPM: 79.8
2365 Male, age 74, right hemisphere 100.2
2062 Male, age 76, both hemispheres 92.0
2697 Female, age 85, both hemispheres 79.6
2126 Male, age 61, both hemispheres 73.2
2795 Female, age 91, both hemispheres 73.2
2327 Male, age 80, both hemispheres 60.4
Motor hypoglossal nucleus
nTPM: 86.5
2125 Female, age 91, both hemispheres 101.7
2182 Male, age 80, both hemispheres 95.9
2132 Female, age 85, both hemispheres 94.9
2461 Male, age 61, both hemispheres 77.4
2277 Male, age 76, both hemispheres 62.7
Motor trigeminal nucleus
nTPM: 79.3
2560 Male, age 74, both hemispheres 89.3
2335 Male, age 61, both hemispheres 85.3
2309 Male, age 76, both hemispheres 81.8
2079 Male, age 80, both hemispheres 74.9
2321 Female, age 91, both hemispheres 65.5
Nuclei of the trapezoid body
nTPM: 86.2
1983 Male, age 76, both hemispheres 104.6
2159 Male, age 61, both hemispheres 91.6
2166 Male, age 80, both hemispheres 82.9
2735 Female, age 85, both hemispheres 81.6
2368 Female, age 91, both hemispheres 70.5
Nucleus ambiguus
nTPM: 84.6
2071 Male, age 76, both hemispheres 98.5
2096 Female, age 85, both hemispheres 70.6
Nucleus cuneatus
nTPM: 77.6
2564 Male, age 74, both hemispheres 88.6
2381 Male, age 80, both hemispheres 85.0
2376 Male, age 61, both hemispheres 83.2
2380 Male, age 80, both hemispheres 80.3
2131 Male, age 76, both hemispheres 77.7
2808 Female, age 85, both hemispheres 75.7
2562 Male, age 61, both hemispheres 72.9
2100 Male, age 76, both hemispheres 67.5
2805 Female, age 91, both hemispheres 67.0
Nucleus gracilis
nTPM: 78.2
2627 Male, age 74, both hemispheres 87.8
2382 Male, age 80, both hemispheres 86.6
2299 Female, age 85, both hemispheres 60.3
Nucleus raphe magnus
nTPM: 81.7
2160 Male, age 61, both hemispheres 91.8
2455 Male, age 74, both hemispheres 87.1
2051 Male, age 76, both hemispheres 86.0
2172 Female, age 85, both hemispheres 78.9
2459 Female, age 91, both hemispheres 73.7
2328 Male, age 80, both hemispheres 72.6
Nucleus raphe obscurus
nTPM: 89.4
2845 Female, age 85, midline 95.5
2800 Male, age 61, midline 90.2
2142 Male, age 76, midline 82.6
Nucleus raphe pallidus
nTPM: 95.3
1924 Male, age 61, midline 119.2
2183 Male, age 80, midline 100.1
2145 Male, age 76, midline 66.5
Nucleus tractus solitarii
nTPM: 69.7
2656 Male, age 76, both hemispheres 91.0
2191 Female, age 85, both hemispheres 72.4
2307 Male, age 80, both hemispheres 60.3
2144 Female, age 91, right hemisphere 54.9
Paramedian reticular nucleus
nTPM: 92.2
2050 Female, age 85, both hemispheres 101.9
2057 Male, age 80, both hemispheres 95.2
2313 Male, age 61, both hemispheres 91.0
2052 Male, age 76, both hemispheres 80.6
Parvicellular reticular nuclei
nTPM: 87.6
2119 Male, age 80, both hemispheres 98.7
2095 Male, age 76, both hemispheres 93.4
2558 Male, age 74, both hemispheres 70.7
Parvicellular reticular nuclei, medullary
nTPM: 94.5
2091 Female, age 85, both hemispheres 97.9
2189 Female, age 91, both hemispheres 94.2
2181 Male, age 80, left hemisphere 91.4
Pedunculopontine tegmental nucleus
nTPM: 103.1
2338 Male, age 61, both hemispheres 113.3
2334 Male, age 80, both hemispheres 103.0
1921 Female, age 85, both hemispheres 93.1
Peritrigeminal nucleus
nTPM: 96.7
2067 Female, age 85, both hemispheres 104.8
2136 Male, age 76, both hemispheres 101.5
2179 Male, age 61, both hemispheres 83.8
Pontine nuclei
nTPM: 92.1
1863 Male, age 55, unknown 106.5
2454 Male, age 74, left hemisphere 104.6
2787 Female, age 85, both hemispheres 95.8
1968 Male, age 76, left hemisphere 94.6
2109 Female, age 72, unknown 93.4
2319 Female, age 91, both hemispheres 83.6
2727 Male, age 61, right hemisphere 83.5
2115 Male, age 80, left hemisphere 75.2
Pontine raphe nucleus
nTPM: 92.9
2122 Female, age 85, midline 94.4
2853 Male, age 76, midline 91.3
Posteroventral cochlear nucleus
nTPM: 90.7
2070 Male, age 76, both hemispheres 97.5
2371 Male, age 61, both hemispheres 95.6
2752 Female, age 85, both hemispheres 94.8
2341 Male, age 80, both hemispheres 83.1
2135 Female, age 91, both hemispheres 82.8
Prepositus hypoglossal nucleus
nTPM: 82.1
2855 Female, age 85, right hemisphere 87.3
2086 Male, age 80, both hemispheres 76.9
Principal sensory trigeminal nucleus
nTPM: 83.3
2158 Male, age 61, both hemispheres 90.9
2324 Male, age 76, both hemispheres 84.7
2367 Female, age 91, left hemisphere 82.8
2008 Male, age 80, left hemisphere 74.8
Reticular pontine nucleus, caudal
nTPM: 87.1
2092 Male, age 76, both hemispheres 100.6
2559 Male, age 74, both hemispheres 89.0
2457 Female, age 91, both hemispheres 84.9
2332 Male, age 80, right hemisphere 73.8
Reticular pontine nucleus, oral
nTPM: 100.0
1939 Male, age 80, both hemispheres 111.0
2167 Male, age 76, both hemispheres 109.7
2361 Male, age 74, both hemispheres 99.8
2012 Female, age 85, both hemispheres 92.4
2366 Female, age 91, both hemispheres 87.2
Reticulotegmental nucleus
nTPM: 80.0
2322 Female, age 91, both hemispheres 83.7
2333 Male, age 80, both hemispheres 81.6
2452 Male, age 74, both hemispheres 79.9
2325 Male, age 76, both hemispheres 74.6
Spinal trigeminal nucleus, caudal
nTPM: 86.3
2390 Female, age 91, both hemispheres 93.6
2642 Male, age 74, both hemispheres 88.0
2447 Male, age 76, both hemispheres 86.3
2312 Male, age 61, both hemispheres 84.6
2308 Male, age 80, both hemispheres 79.0
Spinal trigeminal nucleus, interpolar
nTPM: 93.5
2066 Male, age 76, right hemisphere 107.6
2625 Male, age 61, both hemispheres 104.6
2389 Female, age 91, both hemispheres 89.5
2033 Male, age 80, both hemispheres 83.3
2386 Female, age 85, both hemispheres 82.3
Spinal trigeminal nucleus, oral
nTPM: 89.9
2737 Female, age 85, both hemispheres 90.3
2164 Male, age 80, both hemispheres 89.8
1978 Male, age 76, both hemispheres 89.6
Spinal vestibular nucleus
nTPM: 95.5
2748 Male, age 76, both hemispheres 102.4
2780 Male, age 80, both hemispheres 101.0
2186 Female, age 91, both hemispheres 97.5
2806 Female, age 85, both hemispheres 96.8
2384 Male, age 74, both hemispheres 89.3
2796 Male, age 61, both hemispheres 86.2
Subcoeruleus area
nTPM: 90.2
2369 Female, age 85, left hemisphere 100.7
1958 Male, age 80, both hemispheres 95.9
2323 Female, age 91, left hemisphere 94.7
2451 Male, age 74, both hemispheres 86.0
2089 Male, age 76, left hemisphere 73.8
Superior olive
nTPM: 86.2
2364 Male, age 74, right hemisphere 102.2
2020 Male, age 76, both hemispheres 96.0
1875 Female, age 85, both hemispheres 91.4
2561 Female, age 91, both hemispheres 71.2
2329 Male, age 80, right hemisphere 70.2
Superior vestibular nucleus
nTPM: 90.3
2383 Male, age 74, both hemispheres 95.6
2015 Male, age 80, both hemispheres 91.5
2061 Male, age 76, both hemispheres 83.9
Ventral medullary reticular nucleus
nTPM: 91.6
2372 Male, age 61, both hemispheres 93.4
2060 Male, age 76, both hemispheres 89.9
Ventral periolivary nuclei
nTPM: 81.3
2023 Male, age 76, both hemispheres 92.5
2165 Male, age 80, both hemispheres 87.3
2130 Female, age 85, both hemispheres 83.2
2794 Female, age 91, left hemisphere 62.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 92.4
2741 Female, age 85, both hemispheres 101.2
1986 Male, age 76, both hemispheres 100.2
2180 Male, age 61, both hemispheres 94.3
2118 Male, age 80, both hemispheres 85.0
2302 Female, age 91, both hemispheres 81.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 91.8
2359 Male, age 61, both hemispheres 109.5
1959 Male, age 76, both hemispheres 98.5
2840 Female, age 85, both hemispheres 91.1
2161 Male, age 80, both hemispheres 85.4
2456 Female, age 91, both hemispheres 84.4
2449 Male, age 74, both hemispheres 82.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 92.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 92.5
FF:10182-103D2 60 years, female 99.0
FF:10165-103B3 76 years, female 86.0
Medulla oblongata
Scaled Tags Per Million: 78.7
FF:10174-103C3 60 years, female 105.6
FF:10155-103A2 76 years, female 66.3
FF:10038-101F2 18-64 years, mixed 64.4
Pons
Scaled Tags Per Million: 61.1
FF:10033-101E6 18-54 years, mixed 61.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 248.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 248.6
Samples: 4

Max nTPM: 281.1
Min nTPM: 231.1
Sample A Male 241.3
Sample B Male 231.1
Sample C Female 281.1
Sample D Female 240.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.5
68744498 Antisense, RP_050208_01_A07, Mouse strain C57BL/6J (56 days, male) 2.5
Pons
Expression energy: 1.9
68744498 Antisense, RP_050208_01_A07, Mouse strain C57BL/6J (56 days, male) 1.9

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