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RPLP2
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  • RPLP2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:504.5 nTPM
FANTOM5:719.2 Scaled Tags Per Million
Pig:45.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA053635
Glial cells Not detected
Neuronal cells Low

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

504.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 504.5
Samples: 246

Max nTPM: 1058.3
Min nTPM: 172.7
Std nTPM: 143.1
Median nTPM: 486.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1058.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 994.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 971.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 970.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 893.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 876.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 870.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 865.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 780.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 776.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 769.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 767.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 763.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 760.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 750.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 735.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 727.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 720.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 719.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 707.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 704.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 703.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 702.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 694.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 686.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 683.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 670.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 668.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 665.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 654.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 651.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 647.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 644.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 641.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 636.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 632.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 629.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 629.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 628.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 627.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 626.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 624.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 620.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 618.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 617.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 616.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 615.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 612.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 612.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 611.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 610.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 606.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 603.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 602.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 602.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 601.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 593.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 592.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 582.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 581.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 581.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 579.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 573.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 572.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 569.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 568.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 568.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 568.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 563.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 563.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 561.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 559.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 559.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 557.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 556.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 555.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 555.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 555.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 555.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 553.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 551.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 549.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 548.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 547.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 545.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 543.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 541.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 541.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 540.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 537.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 532.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 532.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 530.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 527.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 526.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 525.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 523.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 520.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 520.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 519.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 518.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 515.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 515.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 514.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 510.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 509.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 509.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 509.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 508.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 505.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 503.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 502.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 502.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 501.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 498.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 498.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 497.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 496.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 494.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 494.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 488.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 488.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 486.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 486.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 486.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 485.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 483.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 483.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 482.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 481.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 480.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 476.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 476.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 475.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 474.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 473.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 473.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 472.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 471.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 471.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 466.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 466.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 466.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 466.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 465.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 463.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 462.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 461.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 459.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 457.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 456.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 456.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 455.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 454.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 453.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 452.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 451.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 449.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 448.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 448.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 447.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 446.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 443.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 441.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 431.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 431.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 426.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 424.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 423.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 421.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 420.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 420.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 420.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 420.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 419.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 417.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 413.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 411.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 409.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 408.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 408.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 407.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 404.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 402.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 401.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 400.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 399.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 397.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 397.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 396.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 396.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 394.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 393.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 391.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 381.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 381.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 380.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 380.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 380.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 379.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 378.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 377.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 374.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 373.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 373.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 372.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 372.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 372.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 367.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 362.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 361.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 359.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 358.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 355.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 354.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 354.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 353.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 349.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 348.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 339.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 338.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 337.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 337.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 335.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 334.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 333.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 332.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 332.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 327.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 326.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 325.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 321.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 320.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 317.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 306.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 303.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 300.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 299.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 291.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 288.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 279.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 270.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 262.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 229.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 181.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 172.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

719.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 719.2
FF:10164-103B2 76 years, female 719.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.6
Pig sample Sample description nTPM
Caudate
nTPM: 45.7
Samples: 4

Max nTPM: 50.8
Min nTPM: 38.6
Sample A Female 44.7
Sample B Female 48.5
Sample C Male 50.8
Sample D Male 38.6

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