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RPS27
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TISSUE SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:5286.5 nTPM
HPA:2012.7 nTPM
GTEx:5286.5 nTPM
FANTOM5:288.4 Scaled Tags Per Million

SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2012.7
overview
Male, age 65
Small intestine sample 232
nTPM: 2531
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1974.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1743.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1801.4

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5286.5
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 5286.5
Samples: 187

Max nTPM: 15114.1
Min nTPM: 2371.9
Std nTPM: 2317.1
Median nTPM: 4733.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 15114.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 13648.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 12263.1
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 12227.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 11865.7
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 11089.4
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 10056.5
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 9888.6
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 9816.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 9777.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 9671.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 9661.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 9544.8
GTEX-183FY-1626-SM-793D8 20-29 years, male 9062.2
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 8799.2
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 8710.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 8560.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 8518.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 8493.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 8203.6
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 8196.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 8079.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 8021.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 7798.2
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 7731.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 7705.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 7671.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 7666.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 7544.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 7525.8
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 7471.3
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 7417.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 7381.4
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 7379.4
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 7068.1
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 7052.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 7046.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 6996.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 6950.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 6891.1
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 6883.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 6877.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 6669.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 6620.7
GTEX-13O61-1326-SM-5KM31 60-69 years, male 6612.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 6582.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 6376.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 6254.5
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 6234.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 6207.3
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 6204.5
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 6200.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 6178.7
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 6176.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 6148.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 6136.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 6117.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 6010.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 6000.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 5963.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 5815.6
GTEX-14PKU-1626-SM-6871C 40-49 years, female 5795.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 5783.5
GTEX-1192X-2526-SM-59868 50-59 years, male 5777.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 5739.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 5657.3
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 5530.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 5460.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 5431.3
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 5419.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 5379.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 5361.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 5321.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 5312.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 5311.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 5303.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 5266.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 5255.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 5238.4
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 5104.5
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 5091.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 5044.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 5042.3
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 4956.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 4954.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 4927.2
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 4840.7
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 4793.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 4790.3
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 4784.3
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 4782.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 4774.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 4761.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 4733.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 4707.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 4697.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 4682.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 4657.7
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 4583.8
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 4579.3
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 4469.4
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 4463.5
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 4411.7
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 4384.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 4361.7
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 4342.0
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 4330.9
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 4281.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 4256.3
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 4232.2
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 4144.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 4126.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 4120.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 4115.3
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 4112.7
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 4109.4
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 4095.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 4077.1
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 4062.1
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 4036.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 4006.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 3981.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 3949.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 3936.3
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 3905.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 3864.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 3821.8
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 3798.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 3770.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 3767.1
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 3734.1
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 3729.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 3724.7
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 3690.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 3689.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 3683.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 3623.4
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 3592.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 3574.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 3571.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 3571.1
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 3558.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 3500.4
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 3493.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 3483.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 3469.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 3448.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 3404.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 3385.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 3372.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 3367.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 3295.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 3290.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 3283.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 3260.1
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 3246.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 3244.1
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 3231.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 3224.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 3185.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 3171.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 3144.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 3114.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 3094.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 3075.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 3059.4
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 3037.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 2914.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 2903.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 2877.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 2860.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 2802.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 2794.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 2793.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 2728.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 2716.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 2683.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 2681.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 2638.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 2609.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 2602.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 2506.5
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 2431.7
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 2425.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 2412.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 2378.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 2371.9
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

288.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 288.4
FF:10024-101D6 15,40,85 years, mixed 288.4

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