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ODF3B
HPA
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  • ODF3B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ODF3B
Synonyms FAP123
Gene descriptioni

Full gene name according to HGNC.

Outer dense fiber of sperm tails 3B
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 22
Cytoband q13.33
Chromosome location (bp) 50529710 - 50532506
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000177989 (version 109)
Entrez gene 440836
HGNC HGNC:34388
UniProt A8MYP8 (UniProt - Evidence at protein level)
neXtProt NX_A8MYP8
GeneCards ODF3B
Antibodypedia ODF3B antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to be active in cytoskeleton. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ODF3B-201
ENSP00000382804
ENST00000329363
A8MYP8
[Direct mapping] Outer dense fiber protein 3B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005856 [cytoskeleton]
Show all
253 aa
27.3 kDa
No 0
ODF3B-202
ENSP00000384310
ENST00000401779
B5MD02
[Direct mapping] Outer dense fiber protein 3B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
242 aa
26.1 kDa
No 0
ODF3B-203
ENSP00000385123
ENST00000403326
B5MC17
[Direct mapping] Outer dense fiber protein 3B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
185 aa
20.1 kDa
No 0
ODF3B-204
ENSP00000384012
ENST00000405135
B5MCN9
[Direct mapping] Outer dense fiber protein 3B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
281 aa
29.8 kDa
No 0
ODF3B-205
ENSP00000390712
ENST00000428989
A0A8C8KQ56
[Direct mapping] Outer dense fiber protein 3B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
261 aa
28.1 kDa
No 0
ODF3B-206
ENSP00000393668
ENST00000437588
C9JUR5
[Direct mapping] Outer dense fiber protein 3B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
32 aa
3.5 kDa
No 0
ODF3B-210
ENSP00000507825
ENST00000682240
A8MYP8
[Direct mapping] Outer dense fiber protein 3B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005856 [cytoskeleton]
Show all
253 aa
27.3 kDa
No 0

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