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IMPDH2
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  • IMPDH2
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:72.0 nTPM
HPA:62.8 nTPM
GTEx:72.0 nTPM
FANTOM5:78.2 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001400Antibody CAB020717
Glandular cells MediumHigh




SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.8
overview
Male, age 65
Small intestine sample 232
nTPM: 84.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 45.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 58.7
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 61.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.0
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 72.0
Samples: 187

Max nTPM: 157.0
Min nTPM: 25.2
Std nTPM: 19.8
Median nTPM: 69.6
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 157.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 140.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 126.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 123.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 119.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 116.3
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 112.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 110.9
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 103.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 102.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 102.2
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 99.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 99.6
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 99.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 98.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 98.7
GTEX-1192X-2526-SM-59868 50-59 years, male 98.3
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 96.8
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 95.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 95.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 95.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 95.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 95.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 94.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 94.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 93.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 93.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 92.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 92.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 91.9
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 90.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 90.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 89.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 89.3
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 88.4
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 87.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 87.3
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 85.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 85.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 85.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 85.4
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 85.3
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 85.0
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 85.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 84.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 84.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 83.9
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 83.8
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 83.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 82.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 81.8
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 81.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 81.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 81.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 81.2
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 81.2
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 81.1
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 79.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 79.5
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 79.5
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 79.4
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 79.4
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 78.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 78.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 78.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 77.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 77.0
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 76.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 76.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 76.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 76.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 75.8
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 75.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 75.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 75.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 75.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 74.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 73.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 73.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 73.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 72.9
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 72.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 72.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 71.9
GTEX-144GM-1026-SM-79OKU 20-29 years, male 71.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 71.7
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 71.5
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 71.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 70.8
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 70.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 70.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 70.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 69.8
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 69.6
GTEX-13111-1426-SM-5DUW3 50-59 years, male 69.4
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 69.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 68.4
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 67.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 67.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 67.3
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 67.2
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 67.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 66.9
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 66.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 66.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 65.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 65.8
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 65.8
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 65.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 65.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 65.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 64.9
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 64.8
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 64.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 63.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 63.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 63.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 63.3
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 63.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 63.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 62.9
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 62.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 62.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 62.2
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 62.1
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 61.9
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 61.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 61.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 61.1
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 60.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 60.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 60.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 60.2
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 59.9
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 59.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 59.5
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 59.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 58.9
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 58.9
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 58.4
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 58.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 58.3
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 58.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 58.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 57.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 57.3
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 57.1
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 56.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 56.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 56.8
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 56.8
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 56.7
GTEX-13O61-1326-SM-5KM31 60-69 years, male 56.4
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 56.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 55.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 54.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 54.6
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 52.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 52.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 52.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 52.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 51.8
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 51.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 50.8
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 49.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 49.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 49.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 49.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 48.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 48.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 48.4
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 48.4
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 48.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 47.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 45.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 45.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 45.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 44.9
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 42.8
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 41.9
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 41.3
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 40.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 38.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 37.1
GTEX-111YS-1426-SM-5GID8 60-69 years, male 36.7
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 36.3
GTEX-ZTSS-0926-SM-59865 40-49 years, male 25.2
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

78.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 78.2
FF:10024-101D6 15,40,85 years, mixed 78.2

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