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SH2B1
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  • SH2B1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:50.8 nTPM
HPA Brain:88.7 nTPM
GTEx:50.8 nTPM
FANTOM5:56.3 Scaled Tags Per Million
Pig:25.6 nTPM
Mouse:40.3 nTPM
Allen mouse:11.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA076175
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 82.1
2289 Male, age 61, right hemisphere 96.1
1781 Male, age 74, unknown 89.9
2288 Male, age 75, left hemisphere 87.8
2846 Female, age 79, unknown 82.6
2290 Female, age 72, unknown 78.9
1854 Male, age 80, left hemisphere 75.1
2481 Female, age 94, left hemisphere 73.7
1857 Female, age 85, left hemisphere 73.0
Globus pallidus, externus
nTPM: 83.1
2646 Male, age 61, right hemisphere 99.9
2567 Female, age 72, unknown 98.0
2772 Female, age 79, unknown 73.3
1996 Male, age 80, right hemisphere 72.4
2395 Male, age 75, both hemispheres 72.2
Globus pallidus, internus
nTPM: 80.1
2566 Female, age 72, unknown 91.7
2111 Female, age 85, right hemisphere 83.9
1818 Male, age 74, unknown 82.0
2778 Female, age 91, both hemispheres 78.8
2037 Male, age 80, right hemisphere 78.3
2287 Male, age 75, right hemisphere 76.3
2483 Female, age 94, right hemisphere 70.0
Nucleus accumbens
nTPM: 80.1
1783 Male, age 74, unknown 91.6
2698 Female, age 72, unknown 88.0
2824 Male, age 61, right hemisphere 86.7
1806 Female, age 85, left hemisphere 79.0
2732 Male, age 80, right hemisphere 77.7
2286 Male, age 75, left hemisphere 74.8
2391 Female, age 94, left hemisphere 72.7
1856 Female, age 91, right hemisphere 70.7
Nucleus basalis of Meynert
nTPM: 85.5
2569 Male, age 61, both hemispheres 110.4
2484 Female, age 94, left hemisphere 83.5
2821 Male, age 75, both hemispheres 80.1
2393 Male, age 80, right hemisphere 67.9
Nucleus of the diagonal band
nTPM: 88.7
2195 Female, age 85, both hemispheres 96.8
2029 Male, age 61, right hemisphere 96.7
1979 Male, age 74, unknown 86.4
2775 Male, age 80, right hemisphere 85.3
1812 Female, age 91, both hemispheres 78.3
Putamen
nTPM: 83.7
2647 Male, age 75, left hemisphere 106.7
2489 Female, age 72, unknown 95.1
1829 Male, age 74, unknown 88.1
1838 Male, age 80, right hemisphere 79.5
2466 Female, age 79, unknown 75.3
1937 Female, age 91, right hemisphere 71.0
2482 Female, age 94, left hemisphere 70.5
Septal nuclei
nTPM: 86.6
2629 Female, age 94, right hemisphere 103.0
2059 Female, age 85, both hemispheres 94.4
1960 Male, age 74, unknown 91.6
2199 Male, age 80, right hemisphere 87.7
2031 Female, age 72, unknown 79.3
2009 Female, age 91, both hemispheres 76.2
2394 Male, age 61, left hemisphere 74.2
Stria terminalis, bed nucleus
nTPM: 86.4
2201 Male, age 74, unknown 89.7
2486 Female, age 94, both hemispheres 86.1
1974 Female, age 91, both hemispheres 83.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 47.9
Samples: 246

Max nTPM: 69.4
Min nTPM: 14.9
Std nTPM: 7.7
Median nTPM: 48.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 69.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 67.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 67.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 66.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 64.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 63.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 61.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 61.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 60.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 59.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 59.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 59.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 59.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 59.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 59.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 59.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 59.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 59.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 58.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 58.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 58.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 58.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 56.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 56.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 56.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 56.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 55.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 55.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 54.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 54.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 54.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 54.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 54.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 54.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 54.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 54.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 54.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 54.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 53.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 53.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 53.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 53.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 53.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 53.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 53.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 53.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 52.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 52.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 52.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 52.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 52.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 52.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 52.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 52.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 52.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 52.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 51.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 51.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 51.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 51.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 51.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 50.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 50.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 50.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 50.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 50.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 50.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 50.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 50.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 50.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 50.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 49.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 49.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 49.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 49.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 49.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 49.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 49.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 49.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 49.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 49.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 49.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 48.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 48.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 48.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 48.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 48.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 48.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 48.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 48.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 48.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 48.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 48.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 48.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 48.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 48.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 48.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 48.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 48.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 48.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 48.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 48.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 47.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 47.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 47.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 47.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 47.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 47.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 47.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 47.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 46.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 46.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 46.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 46.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 46.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 46.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 46.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 46.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 46.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 46.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 46.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 46.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 46.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 45.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 45.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 45.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 45.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 45.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 45.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 45.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 45.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 45.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 45.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 45.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 45.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 45.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 44.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 44.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 44.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 44.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 44.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 44.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 44.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 44.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 43.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 43.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 43.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 43.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 42.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 42.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 42.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 42.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 42.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 42.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 41.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 41.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 41.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 41.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 41.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 41.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 41.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 41.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 41.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 40.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 40.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 40.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 40.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 40.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 40.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 40.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 40.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 39.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 39.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 39.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 39.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 39.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 37.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 37.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 37.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 37.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 36.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 36.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 36.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 35.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 35.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 34.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 32.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 31.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 31.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 31.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 30.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 29.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 24.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 21.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 14.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 50.8
Samples: 246

Max nTPM: 78.0
Min nTPM: 23.8
Std nTPM: 10.0
Median nTPM: 51.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 78.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 77.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 76.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 74.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 74.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 73.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 72.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 72.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 70.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 70.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 68.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 68.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 67.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 67.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 66.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 66.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 66.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 65.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 65.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 65.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 64.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 64.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 63.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 63.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 63.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 62.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 62.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 62.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 62.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 62.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 62.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 62.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 62.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 61.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 61.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 61.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 60.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 60.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 60.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 60.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 60.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 60.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 59.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 59.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 59.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 58.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 58.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 58.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 58.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 58.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 58.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 58.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 58.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 57.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 57.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 57.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 57.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 57.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 57.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 57.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 57.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 57.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 57.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 56.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 56.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 56.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 56.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 56.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 56.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 56.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 56.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 55.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 55.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 55.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 55.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 55.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 55.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 55.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 54.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 54.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 54.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 54.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 54.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 54.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 54.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 54.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 54.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 54.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 53.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 53.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 53.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 53.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 53.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 53.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 53.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 53.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 53.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 53.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 53.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 53.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 53.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 52.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 52.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 52.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 52.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 52.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 52.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 52.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 52.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 52.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 52.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 52.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 52.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 52.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 51.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 51.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 51.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 51.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 51.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 51.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 50.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 50.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 50.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 50.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 50.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 50.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 50.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 50.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 50.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 50.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 50.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 49.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 49.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 49.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 49.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 49.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 49.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 48.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 48.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 48.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 48.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 48.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 47.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 47.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 47.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 47.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 47.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 47.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 47.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 47.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 47.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 47.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 46.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 46.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 46.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 46.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 46.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 46.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 46.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 46.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 46.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 46.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 46.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 45.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 45.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 45.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 45.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 45.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 45.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 45.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 45.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 45.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 44.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 44.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 44.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 44.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 44.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 44.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 43.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 43.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 43.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 43.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 43.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 43.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 43.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 43.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 43.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 43.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 42.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 42.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 42.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 42.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 42.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 41.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 41.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 41.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 41.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 41.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 41.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 41.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 40.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 40.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 40.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 40.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 39.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 39.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 39.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 39.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 39.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 39.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 38.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 38.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 38.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 38.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 38.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 37.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 37.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 37.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 37.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 37.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 37.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 36.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 35.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 35.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 35.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 35.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 34.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 34.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 33.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 33.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 30.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 30.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 30.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 28.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 27.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 25.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 23.8
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Brain - Putamen (basal ganglia)
Average nTPM: 48.5
Samples: 205

Max nTPM: 69.5
Min nTPM: 29.0
Std nTPM: 7.3
Median nTPM: 48.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 69.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 69.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 66.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 66.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 64.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 63.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 63.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 62.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 61.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 61.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 60.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 60.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 59.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 59.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 59.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 59.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 59.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 58.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 58.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 58.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 57.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 57.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 57.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 56.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 56.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 56.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 56.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 56.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 55.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 55.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 55.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 55.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 55.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 55.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 54.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 54.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 54.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 54.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 54.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 54.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 53.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 53.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 53.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 53.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 53.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 53.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 53.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 52.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 52.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 52.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 52.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 52.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 52.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 52.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 52.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 52.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 51.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 51.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 51.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 51.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 51.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 51.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 51.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 51.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 50.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 50.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 50.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 50.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 50.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 50.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 50.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 49.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 49.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 49.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 49.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 49.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 49.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 49.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 49.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 49.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 49.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 49.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 49.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 49.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 48.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 48.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 48.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 48.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 48.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 48.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 48.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 48.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 48.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 48.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 48.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 47.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 47.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 47.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 47.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 47.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 47.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 47.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 47.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 47.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 47.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 47.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 47.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 47.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 46.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 46.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 46.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 46.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 46.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 46.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 46.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 46.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 46.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 45.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 45.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 45.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 45.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 45.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 45.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 45.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 44.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 44.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 44.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 44.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 44.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 44.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 44.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 44.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 44.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 44.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 43.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 43.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 43.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 43.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 43.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 43.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 43.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 43.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 43.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 43.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 43.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 43.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 42.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 42.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 42.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 42.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 42.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 42.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 41.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 41.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 41.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 41.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 41.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 41.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 41.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 41.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 41.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 40.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 40.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 40.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 40.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 40.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 40.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 40.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 40.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 39.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 39.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 38.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 37.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 37.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 37.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 37.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 37.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 36.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 36.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 35.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 35.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 34.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 34.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 33.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 29.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

56.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 53.6
FF:10164-103B2 76 years, female 53.6
Nucleus accumbens
Scaled Tags Per Million: 47.5
FF:10037-101F1 23-56 years, mixed 47.5
Putamen
Scaled Tags Per Million: 56.3
FF:10176-103C5 60 years, female 56.3
Globus pallidus
Scaled Tags Per Million: 39.2
FF:10161-103A8 76 years, female 44.6
FF:10175-103C4 60 years, female 33.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.6
Pig sample Sample description nTPM
Caudate
nTPM: 25.6
Samples: 4

Max nTPM: 30.9
Min nTPM: 20.9
Sample A Female 20.9
Sample B Female 25.9
Sample C Male 30.9
Sample D Male 24.7
Putamen
nTPM: 24.8
Samples: 4

Max nTPM: 31.3
Min nTPM: 18.4
Sample A Female 18.4
Sample B Female 21.4
Sample C Male 27.9
Sample D Male 31.3
Septum
nTPM: 21.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 21.0
Sample A Female 22.6
Sample B Female 21.8
Sample C Male 21.0
Sample D Male 21.4
Ventral pallidum
nTPM: 23.4
Samples: 4

Max nTPM: 28.7
Min nTPM: 19.5
Sample A Female 19.5
Sample B Female 22.0
Sample C Male 28.7
Sample D Male 23.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 39.1
Samples: 4

Max nTPM: 42.9
Min nTPM: 37.4
Sample A Male 37.4
Sample B Male 42.9
Sample C Female 37.5
Sample D Female 38.5
Septum
nTPM: 34.8
Samples: 4

Max nTPM: 35.8
Min nTPM: 32.9
Sample A Male 35.1
Sample B Male 32.9
Sample C Female 35.4
Sample D Female 35.8
Ventral forebrain
nTPM: 40.4
Samples: 4

Max nTPM: 42.9
Min nTPM: 36.4
Sample A Male 39.3
Sample B Male 36.4
Sample C Female 42.9
Sample D Female 42.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.3
68799022 Antisense, RP_050217_01_H03, Mouse strain C57BL/6J (56 days, male) 11.3
Pallidum
Expression energy: 7.9
68799022 Antisense, RP_050217_01_H03, Mouse strain C57BL/6J (56 days, male) 7.9

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