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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:89.7 nTPM
HPA Brain:71.7 nTPM
GTEx:89.7 nTPM
FANTOM5:89.3 Scaled Tags Per Million
Pig:189.4 nTPM
Mouse:31.5 nTPM
Allen mouse:3.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044618Antibody HPA062014
Glial cells LowNot detected
Neuronal cells LowNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 62.9
2481 Female, age 94, left hemisphere 71.3
1854 Male, age 80, left hemisphere 66.5
2288 Male, age 75, left hemisphere 64.2
1781 Male, age 74, unknown 63.7
2846 Female, age 79, unknown 63.5
1857 Female, age 85, left hemisphere 63.0
2290 Female, age 72, unknown 58.2
2289 Male, age 61, right hemisphere 52.5
Globus pallidus, externus
nTPM: 71.7
2772 Female, age 79, unknown 95.2
2395 Male, age 75, both hemispheres 82.4
1996 Male, age 80, right hemisphere 75.0
2567 Female, age 72, unknown 54.1
2646 Male, age 61, right hemisphere 51.5
Globus pallidus, internus
nTPM: 68.1
2287 Male, age 75, right hemisphere 84.8
1818 Male, age 74, unknown 72.8
2778 Female, age 91, both hemispheres 72.4
2037 Male, age 80, right hemisphere 69.9
2483 Female, age 94, right hemisphere 67.7
2566 Female, age 72, unknown 58.2
2111 Female, age 85, right hemisphere 51.2
Nucleus accumbens
nTPM: 66.8
1856 Female, age 91, right hemisphere 86.8
2824 Male, age 61, right hemisphere 71.7
1783 Male, age 74, unknown 71.4
1806 Female, age 85, left hemisphere 67.7
2391 Female, age 94, left hemisphere 62.6
2286 Male, age 75, left hemisphere 62.4
2698 Female, age 72, unknown 61.7
2732 Male, age 80, right hemisphere 50.0
Nucleus basalis of Meynert
nTPM: 57.5
2393 Male, age 80, right hemisphere 62.5
2484 Female, age 94, left hemisphere 62.5
2821 Male, age 75, both hemispheres 53.0
2569 Male, age 61, both hemispheres 52.0
Nucleus of the diagonal band
nTPM: 61.9
1812 Female, age 91, both hemispheres 71.8
2775 Male, age 80, right hemisphere 69.7
2029 Male, age 61, right hemisphere 60.9
2195 Female, age 85, both hemispheres 54.1
1979 Male, age 74, unknown 53.1
Putamen
nTPM: 60.8
1838 Male, age 80, right hemisphere 76.3
1937 Female, age 91, right hemisphere 74.4
2466 Female, age 79, unknown 70.3
2482 Female, age 94, left hemisphere 66.7
2489 Female, age 72, unknown 47.0
2647 Male, age 75, left hemisphere 46.2
1829 Male, age 74, unknown 44.8
Septal nuclei
nTPM: 54.5
2031 Female, age 72, unknown 68.1
2009 Female, age 91, both hemispheres 63.8
1960 Male, age 74, unknown 60.3
2199 Male, age 80, right hemisphere 49.2
2394 Male, age 61, left hemisphere 48.9
2629 Female, age 94, right hemisphere 47.7
2059 Female, age 85, both hemispheres 43.9
Stria terminalis, bed nucleus
nTPM: 54.8
1974 Female, age 91, both hemispheres 64.5
2486 Female, age 94, both hemispheres 50.7
2201 Male, age 74, unknown 49.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 83.4
Samples: 246

Max nTPM: 227.5
Min nTPM: 39.6
Std nTPM: 27.8
Median nTPM: 78.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 227.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 215.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 201.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 188.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 172.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 158.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 147.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 140.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 139.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 138.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 138.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 138.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 132.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 132.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 132.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 130.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 129.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 124.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 124.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 122.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 121.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 114.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 114.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 112.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 112.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 111.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 111.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 109.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 109.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 108.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 107.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 106.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 106.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 106.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 106.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 105.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 104.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 104.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 103.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 102.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 102.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 102.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 101.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 100.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 100.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 99.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 99.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 98.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 98.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 97.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 97.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 97.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 97.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 96.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 95.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 93.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 93.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 92.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 92.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 92.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 91.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 91.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 91.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 91.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 90.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 90.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 90.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 90.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 90.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 90.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 90.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 89.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 89.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 89.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 89.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 88.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 88.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 88.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 88.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 88.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 88.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 88.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 87.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 86.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 86.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 85.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 85.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 85.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 85.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 85.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 84.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 84.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 84.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 83.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 83.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 83.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 83.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 82.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 82.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 82.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 82.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 82.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 82.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 81.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 80.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 80.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 80.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 80.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 80.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 79.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 79.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 79.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 79.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 79.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 79.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 79.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 78.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 78.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 78.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 77.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 77.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 77.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 77.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 77.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 77.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 76.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 76.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 76.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 75.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 75.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 75.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 75.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 74.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 74.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 74.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 74.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 74.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 74.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 74.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 73.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 73.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 73.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 73.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 73.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 73.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 72.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 72.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 72.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 71.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 71.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 71.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 70.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 70.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 70.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 70.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 70.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 69.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 69.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 69.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 68.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 68.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 68.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 67.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 67.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 67.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 66.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 64.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 64.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 64.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 64.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 64.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 63.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 63.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 63.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 63.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 62.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 62.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 62.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 61.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 61.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 61.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 60.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 60.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 59.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 59.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 59.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 59.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 58.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 58.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 58.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 57.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 57.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 57.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 56.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 56.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 55.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 55.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 55.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 55.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 54.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 54.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 54.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 53.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 53.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 53.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 53.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 51.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 51.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 51.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 50.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 48.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 47.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 46.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 88.8
Samples: 246

Max nTPM: 213.3
Min nTPM: 29.3
Std nTPM: 26.2
Median nTPM: 84.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 213.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 192.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 179.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 172.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 168.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 152.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 150.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 150.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 145.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 141.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 140.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 139.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 135.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 133.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 132.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 128.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 128.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 126.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 122.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 122.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 121.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 121.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 120.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 120.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 118.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 117.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 116.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 115.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 115.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 115.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 115.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 114.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 114.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 114.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 114.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 113.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 112.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 112.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 111.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 111.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 110.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 109.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 109.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 108.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 108.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 107.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 106.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 106.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 106.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 106.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 105.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 105.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 104.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 104.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 104.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 103.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 103.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 103.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 103.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 102.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 102.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 102.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 102.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 101.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 101.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 100.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 100.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 100.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 100.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 99.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 99.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 99.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 99.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 99.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 99.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 97.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 97.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 97.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 96.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 96.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 96.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 96.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 95.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 95.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 95.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 95.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 94.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 94.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 94.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 94.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 93.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 93.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 92.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 92.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 92.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 92.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 92.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 92.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 91.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 91.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 91.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 91.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 91.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 90.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 90.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 90.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 90.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 89.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 88.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 88.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 87.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 87.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 86.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 86.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 86.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 85.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 85.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 85.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 85.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 85.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 85.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 85.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 85.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 84.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 84.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 83.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 83.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 83.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 82.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 82.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 82.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 82.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 82.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 81.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 81.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 81.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 81.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 81.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 80.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 80.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 80.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 80.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 80.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 80.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 80.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 79.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 79.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 79.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 79.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 79.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 79.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 79.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 79.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 78.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 78.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 77.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 77.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 77.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 77.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 77.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 76.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 76.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 76.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 76.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 75.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 75.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 75.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 75.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 75.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 74.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 74.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 74.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 74.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 74.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 74.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 74.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 74.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 73.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 73.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 73.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 73.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 72.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 72.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 71.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 71.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 70.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 70.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 69.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 69.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 69.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 69.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 69.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 69.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 69.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 68.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 68.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 68.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 68.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 68.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 68.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 67.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 67.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 67.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 66.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 66.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 65.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 65.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 65.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 64.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 64.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 64.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 64.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 63.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 63.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 63.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 63.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 62.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 62.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 60.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 60.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 59.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 58.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 58.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 58.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 58.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 58.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 57.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 56.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 55.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 55.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 55.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 54.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 52.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 52.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 51.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 50.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 50.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 49.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 47.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 44.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 43.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 43.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 38.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 29.3
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Brain - Putamen (basal ganglia)
Average nTPM: 89.7
Samples: 205

Max nTPM: 186.2
Min nTPM: 39.9
Std nTPM: 24.6
Median nTPM: 85.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 186.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 178.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 172.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 149.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 148.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 145.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 137.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 136.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 133.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 132.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 129.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 127.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 127.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 127.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 126.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 125.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 124.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 124.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 123.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 122.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 122.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 122.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 121.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 120.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 119.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 118.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 118.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 117.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 117.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 117.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 116.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 115.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 115.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 114.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 114.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 114.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 113.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 113.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 112.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 112.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 111.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 108.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 107.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 107.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 107.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 106.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 105.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 105.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 104.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 104.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 104.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 103.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 103.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 103.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 103.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 103.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 102.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 102.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 102.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 102.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 101.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 101.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 100.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 99.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 99.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 98.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 98.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 97.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 97.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 97.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 97.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 96.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 96.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 96.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 96.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 95.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 95.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 94.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 94.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 94.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 92.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 91.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 91.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 91.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 90.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 90.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 90.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 90.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 90.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 89.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 89.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 89.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 89.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 88.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 87.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 87.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 87.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 86.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 86.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 86.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 86.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 85.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 85.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 84.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 84.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 84.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 84.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 84.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 83.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 83.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 83.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 83.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 83.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 82.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 82.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 82.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 82.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 81.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 80.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 80.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 80.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 79.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 79.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 79.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 79.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 79.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 79.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 77.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 77.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 77.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 77.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 77.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 76.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 76.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 76.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 76.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 75.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 75.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 75.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 75.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 73.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 73.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 73.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 73.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 73.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 73.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 73.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 73.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 72.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 72.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 72.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 72.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 71.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 71.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 71.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 71.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 70.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 70.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 70.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 69.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 69.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 68.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 67.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 66.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 66.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 66.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 66.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 66.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 66.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 66.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 65.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 65.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 65.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 65.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 64.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 63.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 63.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 63.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 63.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 63.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 63.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 62.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 62.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 61.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 61.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 60.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 60.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 60.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 58.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 54.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 54.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 54.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 53.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 53.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 51.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 50.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 48.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 43.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 39.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

89.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 72.0
FF:10164-103B2 76 years, female 72.0
Nucleus accumbens
Scaled Tags Per Million: 47.4
FF:10037-101F1 23-56 years, mixed 47.4
Putamen
Scaled Tags Per Million: 83.6
FF:10176-103C5 60 years, female 83.6
Globus pallidus
Scaled Tags Per Million: 89.3
FF:10175-103C4 60 years, female 113.0
FF:10161-103A8 76 years, female 65.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.4
Pig sample Sample description nTPM
Caudate
nTPM: 147.1
Samples: 4

Max nTPM: 170.6
Min nTPM: 132.5
Sample A Female 170.6
Sample B Female 135.9
Sample C Male 149.4
Sample D Male 132.5
Putamen
nTPM: 189.4
Samples: 4

Max nTPM: 216.3
Min nTPM: 142.9
Sample A Female 216.3
Sample B Female 142.9
Sample C Male 208.5
Sample D Male 189.9
Septum
nTPM: 167.2
Samples: 4

Max nTPM: 189.3
Min nTPM: 144.7
Sample A Female 189.3
Sample B Female 148.4
Sample C Male 186.5
Sample D Male 144.7
Ventral pallidum
nTPM: 160.8
Samples: 4

Max nTPM: 167.2
Min nTPM: 144.8
Sample A Female 144.8
Sample B Female 165.3
Sample C Male 167.2
Sample D Male 165.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 28.5
Samples: 4

Max nTPM: 36.0
Min nTPM: 22.1
Sample A Male 30.3
Sample B Male 36.0
Sample C Female 22.1
Sample D Female 25.7
Septum
nTPM: 27.9
Samples: 4

Max nTPM: 30.5
Min nTPM: 25.5
Sample A Male 25.5
Sample B Male 30.5
Sample C Female 30.0
Sample D Female 25.6
Ventral forebrain
nTPM: 31.6
Samples: 4

Max nTPM: 37.6
Min nTPM: 26.3
Sample A Male 32.2
Sample B Male 26.3
Sample C Female 37.6
Sample D Female 30.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.5
69202388 Antisense, RP_050324_03_E11, Mouse strain C57BL/6J (56 days, male) 3.5
Pallidum
Expression energy: 2.9
69202388 Antisense, RP_050324_03_E11, Mouse strain C57BL/6J (56 days, male) 2.9

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