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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:60.6 nTPM
HPA Brain:67.0 nTPM
GTEx:60.6 nTPM
FANTOM5:108.5 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:69.4 nTPM
Allen mouse:3.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007199
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 52.7
1781 Male, age 74, unknown 57.9
2288 Male, age 75, left hemisphere 56.5
1857 Female, age 85, left hemisphere 54.7
2290 Female, age 72, unknown 54.5
2481 Female, age 94, left hemisphere 53.3
1854 Male, age 80, left hemisphere 51.3
2846 Female, age 79, unknown 47.8
2289 Male, age 61, right hemisphere 46.0
Globus pallidus, externus
nTPM: 42.0
2772 Female, age 79, unknown 50.3
1996 Male, age 80, right hemisphere 43.4
2395 Male, age 75, both hemispheres 42.9
2646 Male, age 61, right hemisphere 38.0
2567 Female, age 72, unknown 35.5
Globus pallidus, internus
nTPM: 42.8
2287 Male, age 75, right hemisphere 56.0
2483 Female, age 94, right hemisphere 48.6
2778 Female, age 91, both hemispheres 41.6
2037 Male, age 80, right hemisphere 41.0
1818 Male, age 74, unknown 39.7
2566 Female, age 72, unknown 37.9
2111 Female, age 85, right hemisphere 34.9
Nucleus accumbens
nTPM: 54.8
1783 Male, age 74, unknown 64.8
1856 Female, age 91, right hemisphere 64.2
2824 Male, age 61, right hemisphere 61.9
1806 Female, age 85, left hemisphere 60.3
2286 Male, age 75, left hemisphere 55.5
2732 Male, age 80, right hemisphere 46.6
2698 Female, age 72, unknown 43.9
2391 Female, age 94, left hemisphere 41.0
Nucleus basalis of Meynert
nTPM: 45.0
2484 Female, age 94, left hemisphere 51.6
2821 Male, age 75, both hemispheres 46.2
2393 Male, age 80, right hemisphere 44.5
2569 Male, age 61, both hemispheres 37.5
Nucleus of the diagonal band
nTPM: 67.0
2029 Male, age 61, right hemisphere 73.3
1812 Female, age 91, both hemispheres 68.1
2775 Male, age 80, right hemisphere 65.4
2195 Female, age 85, both hemispheres 64.6
1979 Male, age 74, unknown 63.5
Putamen
nTPM: 51.2
2466 Female, age 79, unknown 61.5
1838 Male, age 80, right hemisphere 61.2
1937 Female, age 91, right hemisphere 60.5
1829 Male, age 74, unknown 48.5
2647 Male, age 75, left hemisphere 42.7
2482 Female, age 94, left hemisphere 42.4
2489 Female, age 72, unknown 41.8
Septal nuclei
nTPM: 63.4
2031 Female, age 72, unknown 84.6
1960 Male, age 74, unknown 78.7
2009 Female, age 91, both hemispheres 70.9
2059 Female, age 85, both hemispheres 59.4
2394 Male, age 61, left hemisphere 55.8
2629 Female, age 94, right hemisphere 47.8
2199 Male, age 80, right hemisphere 46.4
Stria terminalis, bed nucleus
nTPM: 61.8
1974 Female, age 91, both hemispheres 68.0
2486 Female, age 94, both hemispheres 62.2
2201 Male, age 74, unknown 55.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 50.6
Samples: 246

Max nTPM: 84.6
Min nTPM: 18.8
Std nTPM: 11.0
Median nTPM: 50.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 84.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 82.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 82.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 81.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 78.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 77.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 76.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 76.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 72.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 69.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 69.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 68.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 68.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 68.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 67.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 67.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 66.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 66.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 66.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 64.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 64.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 62.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 62.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 62.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 62.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 62.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 62.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 61.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 61.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 60.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 60.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 60.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 60.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 60.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 60.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 59.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 59.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 59.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 58.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 58.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 58.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 58.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 58.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 58.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 58.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 58.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 57.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 57.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 56.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 56.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 56.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 56.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 56.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 56.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 56.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 56.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 55.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 55.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 55.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 55.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 55.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 55.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 54.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 54.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 54.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 54.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 53.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 53.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 53.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 53.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 53.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 53.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 52.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 52.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 52.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 52.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 52.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 52.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 51.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 51.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 51.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 51.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 51.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 51.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 51.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 51.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 51.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 50.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 50.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 50.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 50.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 50.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 50.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 50.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 50.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 50.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 50.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 50.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 50.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 50.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 50.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 50.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 49.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 49.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 49.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 49.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 48.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 48.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 48.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 48.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 48.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 48.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 48.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 48.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 47.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 47.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 47.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 47.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 47.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 46.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 46.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 46.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 46.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 46.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 45.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 45.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 45.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 45.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 45.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 45.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 45.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 45.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 45.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 45.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 44.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 44.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 44.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 44.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 44.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 44.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 44.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 44.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 44.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 44.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 43.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 43.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 43.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 43.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 43.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 43.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 43.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 43.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 43.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 42.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 42.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 42.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 42.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 42.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 42.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 41.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 41.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 41.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 41.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 40.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 40.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 40.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 40.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 40.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 40.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 40.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 40.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 39.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 39.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 39.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 39.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 39.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 38.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 38.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 38.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 37.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 37.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 37.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 36.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 36.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 36.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 36.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 35.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 35.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 34.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 33.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 33.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 33.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 32.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 30.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 29.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 28.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 27.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 26.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 24.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 22.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 60.6
Samples: 246

Max nTPM: 139.7
Min nTPM: 15.0
Std nTPM: 17.1
Median nTPM: 58.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 139.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 112.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 111.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 106.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 102.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 99.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 97.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 97.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 97.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 96.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 96.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 92.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 87.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 87.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 86.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 86.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 86.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 85.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 84.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 84.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 83.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 83.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 82.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 82.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 82.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 81.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 81.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 81.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 81.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 80.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 80.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 80.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 79.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 79.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 79.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 79.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 78.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 78.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 78.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 78.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 78.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 77.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 77.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 76.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 76.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 75.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 74.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 74.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 74.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 74.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 73.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 73.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 72.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 72.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 71.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 71.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 71.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 71.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 71.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 70.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 70.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 70.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 69.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 68.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 68.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 68.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 68.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 68.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 68.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 67.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 67.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 67.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 66.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 66.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 66.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 66.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 66.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 66.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 65.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 65.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 65.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 65.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 65.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 64.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 64.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 64.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 64.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 63.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 62.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 62.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 62.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 62.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 62.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 62.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 61.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 61.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 61.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 61.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 61.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 60.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 60.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 60.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 60.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 60.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 60.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 60.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 60.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 60.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 59.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 59.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 59.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 59.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 59.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 59.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 58.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 58.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 58.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 58.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 58.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 58.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 58.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 57.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 57.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 57.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 57.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 57.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 57.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 57.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 57.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 57.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 57.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 57.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 56.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 56.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 56.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 56.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 55.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 55.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 55.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 55.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 55.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 55.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 55.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 54.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 54.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 54.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 54.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 54.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 54.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 53.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 53.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 53.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 53.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 53.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 53.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 53.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 53.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 52.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 52.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 52.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 52.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 51.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 51.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 51.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 50.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 50.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 50.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 50.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 50.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 50.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 49.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 49.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 49.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 49.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 49.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 48.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 48.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 48.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 48.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 48.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 48.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 47.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 47.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 47.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 47.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 46.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 46.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 46.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 46.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 46.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 46.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 46.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 46.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 46.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 45.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 45.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 45.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 45.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 44.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 44.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 44.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 43.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 43.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 43.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 42.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 42.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 41.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 41.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 41.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 41.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 41.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 40.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 40.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 40.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 40.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 40.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 40.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 40.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 39.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 38.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 38.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 37.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 37.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 37.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 35.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 32.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 30.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 24.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 24.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 20.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 20.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 15.0
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Brain - Putamen (basal ganglia)
Average nTPM: 53.1
Samples: 205

Max nTPM: 90.1
Min nTPM: 23.9
Std nTPM: 12.3
Median nTPM: 52.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 90.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 84.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 82.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 79.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 77.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 77.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 75.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 75.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 75.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 73.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 72.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 72.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 71.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 71.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 70.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 70.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 69.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 68.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 68.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 68.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 68.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 68.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 67.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 67.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 67.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 67.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 66.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 66.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 66.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 66.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 66.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 66.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 65.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 65.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 64.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 64.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 64.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 64.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 64.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 64.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 63.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 63.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 63.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 63.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 62.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 62.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 62.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 62.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 62.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 61.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 61.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 61.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 61.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 61.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 61.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 61.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 61.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 61.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 60.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 60.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 59.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 59.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 58.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 58.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 58.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 58.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 58.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 57.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 57.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 57.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 57.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 57.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 56.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 56.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 56.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 56.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 56.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 56.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 56.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 56.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 55.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 55.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 55.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 55.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 55.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 55.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 55.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 54.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 54.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 54.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 54.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 54.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 53.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 53.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 52.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 52.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 52.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 52.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 51.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 51.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 51.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 51.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 50.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 50.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 50.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 50.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 50.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 50.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 50.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 50.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 50.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 49.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 49.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 49.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 49.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 49.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 48.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 48.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 48.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 48.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 47.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 47.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 47.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 47.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 47.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 47.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 46.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 46.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 46.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 46.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 46.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 46.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 46.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 45.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 45.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 45.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 45.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 45.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 45.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 44.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 44.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 44.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 44.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 44.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 43.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 43.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 43.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 43.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 42.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 42.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 42.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 42.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 42.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 42.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 42.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 41.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 41.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 41.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 39.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 39.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 38.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 38.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 38.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 37.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 37.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 37.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 37.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 36.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 36.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 36.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 35.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 35.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 34.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 34.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 34.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 29.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 28.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 28.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 27.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 26.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 25.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 24.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

108.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 88.5
FF:10164-103B2 76 years, female 88.5
Nucleus accumbens
Scaled Tags Per Million: 81.5
FF:10037-101F1 23-56 years, mixed 81.5
Putamen
Scaled Tags Per Million: 108.5
FF:10176-103C5 60 years, female 108.5
Globus pallidus
Scaled Tags Per Million: 53.7
FF:10175-103C4 60 years, female 58.8
FF:10161-103A8 76 years, female 48.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.3
Pig sample Sample description nTPM
Caudate
nTPM: 27.5
Samples: 4

Max nTPM: 31.3
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 31.3
Sample C Male 29.0
Sample D Male 26.3
Putamen
nTPM: 26.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 23.5
Sample A Female 23.9
Sample B Female 23.5
Sample C Male 32.6
Sample D Male 27.1
Septum
nTPM: 30.3
Samples: 4

Max nTPM: 40.8
Min nTPM: 25.3
Sample A Female 28.5
Sample B Female 26.6
Sample C Male 40.8
Sample D Male 25.3
Ventral pallidum
nTPM: 26.9
Samples: 4

Max nTPM: 34.1
Min nTPM: 23.3
Sample A Female 25.1
Sample B Female 25.2
Sample C Male 34.1
Sample D Male 23.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 53.5
Samples: 4

Max nTPM: 63.9
Min nTPM: 45.7
Sample A Male 54.9
Sample B Male 63.9
Sample C Female 45.7
Sample D Female 49.5
Septum
nTPM: 69.4
Samples: 4

Max nTPM: 76.0
Min nTPM: 63.1
Sample A Male 69.9
Sample B Male 76.0
Sample C Female 68.6
Sample D Female 63.1
Ventral forebrain
nTPM: 63.5
Samples: 4

Max nTPM: 68.7
Min nTPM: 57.3
Sample A Male 67.3
Sample B Male 57.3
Sample C Female 68.7
Sample D Female 60.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.2
69443130 Antisense, RP_050414_03_E03, Mouse strain C57BL/6J (56 days, male) 3.2
Pallidum
Expression energy: 3.5
69443130 Antisense, RP_050414_03_E03, Mouse strain C57BL/6J (56 days, male) 3.5

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