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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:105.9 nTPM
HPA Brain:93.1 nTPM
GTEx:105.9 nTPM
FANTOM5:71.0 Scaled Tags Per Million
Pig:117.3 nTPM
Mouse:191.5 nTPM
Allen mouse:13.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001247
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 82.9
2481 Female, age 94, left hemisphere 96.7
1781 Male, age 74, unknown 84.5
1857 Female, age 85, left hemisphere 84.1
2288 Male, age 75, left hemisphere 83.7
2290 Female, age 72, unknown 83.6
1854 Male, age 80, left hemisphere 79.0
2846 Female, age 79, unknown 78.2
2289 Male, age 61, right hemisphere 73.7
Globus pallidus, externus
nTPM: 93.1
2772 Female, age 79, unknown 122.4
1996 Male, age 80, right hemisphere 104.2
2646 Male, age 61, right hemisphere 93.0
2395 Male, age 75, both hemispheres 86.8
2567 Female, age 72, unknown 58.8
Globus pallidus, internus
nTPM: 92.1
2287 Male, age 75, right hemisphere 115.0
2483 Female, age 94, right hemisphere 109.9
2037 Male, age 80, right hemisphere 100.3
1818 Male, age 74, unknown 96.2
2778 Female, age 91, both hemispheres 94.9
2111 Female, age 85, right hemisphere 65.7
2566 Female, age 72, unknown 62.5
Nucleus accumbens
nTPM: 80.7
1856 Female, age 91, right hemisphere 91.5
2286 Male, age 75, left hemisphere 91.4
1783 Male, age 74, unknown 90.4
1806 Female, age 85, left hemisphere 86.7
2698 Female, age 72, unknown 74.3
2824 Male, age 61, right hemisphere 72.8
2732 Male, age 80, right hemisphere 69.7
2391 Female, age 94, left hemisphere 68.8
Nucleus basalis of Meynert
nTPM: 77.7
2569 Male, age 61, both hemispheres 95.2
2484 Female, age 94, left hemisphere 80.9
2393 Male, age 80, right hemisphere 69.4
2821 Male, age 75, both hemispheres 65.4
Nucleus of the diagonal band
nTPM: 77.7
1812 Female, age 91, both hemispheres 88.9
2775 Male, age 80, right hemisphere 86.1
2029 Male, age 61, right hemisphere 73.8
2195 Female, age 85, both hemispheres 72.6
1979 Male, age 74, unknown 67.0
Putamen
nTPM: 75.7
2466 Female, age 79, unknown 89.1
2482 Female, age 94, left hemisphere 84.5
1937 Female, age 91, right hemisphere 81.9
1838 Male, age 80, right hemisphere 80.8
2647 Male, age 75, left hemisphere 70.1
1829 Male, age 74, unknown 67.5
2489 Female, age 72, unknown 55.7
Septal nuclei
nTPM: 74.9
1960 Male, age 74, unknown 98.8
2031 Female, age 72, unknown 92.0
2009 Female, age 91, both hemispheres 76.2
2059 Female, age 85, both hemispheres 71.9
2394 Male, age 61, left hemisphere 63.9
2629 Female, age 94, right hemisphere 60.8
2199 Male, age 80, right hemisphere 60.3
Stria terminalis, bed nucleus
nTPM: 72.8
1974 Female, age 91, both hemispheres 91.7
2486 Female, age 94, both hemispheres 66.6
2201 Male, age 74, unknown 60.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 97.5
Samples: 246

Max nTPM: 189.9
Min nTPM: 53.2
Std nTPM: 20.4
Median nTPM: 96.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 189.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 172.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 162.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 161.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 145.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 142.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 142.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 141.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 141.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 140.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 135.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 134.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 133.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 127.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 127.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 127.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 125.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 124.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 124.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 123.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 122.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 122.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 122.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 121.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 121.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 121.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 121.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 121.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 120.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 120.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 119.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 119.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 119.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 118.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 118.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 117.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 116.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 116.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 115.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 115.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 114.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 114.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 114.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 113.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 113.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 112.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 112.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 112.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 112.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 112.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 111.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 111.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 110.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 110.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 110.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 110.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 109.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 109.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 109.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 109.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 108.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 108.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 108.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 108.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 107.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 106.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 106.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 106.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 105.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 104.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 104.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 104.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 104.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 104.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 104.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 103.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 103.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 103.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 103.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 103.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 102.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 102.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 102.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 102.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 102.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 102.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 102.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 101.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 101.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 101.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 101.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 100.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 100.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 100.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 100.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 100.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 99.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 99.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 99.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 99.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 99.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 99.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 99.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 98.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 98.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 98.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 98.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 98.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 97.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 97.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 97.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 97.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 97.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 97.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 97.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 97.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 96.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 96.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 96.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 96.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 95.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 95.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 95.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 95.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 95.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 95.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 94.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 94.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 94.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 94.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 94.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 93.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 93.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 93.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 92.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 92.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 92.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 92.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 92.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 92.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 92.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 91.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 91.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 91.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 91.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 91.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 91.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 91.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 90.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 90.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 90.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 88.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 88.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 88.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 87.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 87.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 87.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 87.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 87.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 87.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 86.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 86.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 86.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 86.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 85.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 85.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 85.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 85.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 84.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 84.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 84.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 84.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 84.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 83.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 83.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 83.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 82.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 82.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 82.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 82.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 82.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 82.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 82.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 81.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 81.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 80.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 80.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 80.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 80.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 79.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 79.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 79.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 79.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 78.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 78.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 78.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 78.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 78.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 77.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 77.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 75.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 75.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 74.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 73.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 73.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 72.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 72.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 72.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 72.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 72.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 71.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 71.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 70.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 70.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 69.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 69.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 68.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 65.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 65.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 65.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 64.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 64.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 63.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 61.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 60.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 59.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 53.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 99.2
Samples: 246

Max nTPM: 166.9
Min nTPM: 51.8
Std nTPM: 19.0
Median nTPM: 98.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 166.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 160.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 154.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 153.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 149.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 147.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 147.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 144.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 139.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 139.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 137.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 130.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 129.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 129.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 129.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 128.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 127.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 126.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 125.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 124.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 124.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 124.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 123.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 123.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 122.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 121.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 121.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 121.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 121.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 119.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 119.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 118.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 117.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 116.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 116.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 116.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 116.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 115.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 115.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 114.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 114.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 114.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 114.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 113.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 113.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 113.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 113.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 113.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 112.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 112.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 112.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 112.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 111.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 111.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 111.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 110.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 110.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 110.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 110.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 110.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 108.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 108.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 108.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 108.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 108.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 108.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 108.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 108.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 107.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 106.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 106.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 106.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 106.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 106.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 106.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 106.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 105.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 105.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 105.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 105.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 105.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 104.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 104.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 104.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 104.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 104.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 104.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 104.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 104.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 103.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 103.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 103.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 103.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 102.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 102.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 102.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 102.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 102.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 102.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 102.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 102.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 101.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 101.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 101.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 101.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 101.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 101.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 101.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 101.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 101.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 101.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 100.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 100.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 100.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 100.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 100.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 100.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 99.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 99.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 99.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 99.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 99.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 98.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 98.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 98.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 98.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 98.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 98.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 98.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 98.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 97.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 97.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 97.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 97.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 97.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 97.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 97.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 97.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 97.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 96.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 96.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 95.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 95.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 95.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 95.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 94.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 94.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 94.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 94.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 94.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 93.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 93.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 93.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 92.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 92.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 92.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 92.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 92.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 92.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 91.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 91.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 91.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 90.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 90.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 90.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 90.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 90.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 90.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 90.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 89.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 89.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 89.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 89.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 89.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 88.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 88.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 88.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 88.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 88.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 88.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 87.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 87.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 87.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 87.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 87.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 87.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 86.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 85.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 85.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 85.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 84.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 84.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 84.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 83.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 83.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 83.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 83.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 83.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 83.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 82.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 82.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 82.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 81.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 81.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 81.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 80.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 80.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 80.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 80.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 79.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 79.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 79.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 79.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 79.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 79.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 78.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 78.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 77.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 77.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 77.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 77.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 77.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 76.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 75.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 74.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 74.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 74.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 73.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 71.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 71.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 71.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 71.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 67.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 67.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 66.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 65.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 63.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 62.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 61.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 61.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 59.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 52.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 51.8
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Brain - Putamen (basal ganglia)
Average nTPM: 105.9
Samples: 205

Max nTPM: 172.5
Min nTPM: 57.5
Std nTPM: 18.4
Median nTPM: 105.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 172.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 160.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 148.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 148.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 143.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 143.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 141.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 141.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 139.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 136.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 134.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 133.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 133.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 132.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 131.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 131.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 131.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 131.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 131.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 131.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 130.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 129.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 129.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 128.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 128.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 127.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 127.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 125.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 125.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 125.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 124.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 123.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 122.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 122.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 122.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 122.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 121.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 121.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 120.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 120.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 119.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 119.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 119.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 119.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 118.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 118.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 118.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 117.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 117.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 117.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 117.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 116.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 115.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 115.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 115.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 115.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 115.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 115.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 114.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 114.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 114.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 114.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 113.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 113.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 113.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 113.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 113.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 113.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 112.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 112.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 112.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 111.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 111.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 110.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 110.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 110.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 110.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 109.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 108.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 108.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 108.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 108.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 108.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 108.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 108.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 108.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 108.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 108.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 107.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 107.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 107.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 107.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 107.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 106.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 106.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 106.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 106.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 106.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 106.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 106.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 106.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 105.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 105.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 105.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 105.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 105.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 105.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 105.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 105.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 105.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 104.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 104.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 104.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 104.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 104.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 103.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 103.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 103.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 103.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 102.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 102.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 102.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 101.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 101.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 101.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 101.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 101.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 100.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 100.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 100.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 99.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 99.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 99.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 99.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 99.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 98.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 98.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 98.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 98.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 97.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 97.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 97.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 97.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 96.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 96.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 96.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 96.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 96.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 95.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 95.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 95.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 95.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 95.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 94.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 94.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 94.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 93.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 93.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 93.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 92.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 92.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 91.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 90.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 90.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 90.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 90.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 90.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 89.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 89.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 88.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 88.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 87.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 87.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 87.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 86.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 86.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 86.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 86.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 86.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 85.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 84.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 84.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 83.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 82.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 82.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 82.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 82.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 81.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 81.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 79.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 79.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 79.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 78.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 76.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 73.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 70.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 70.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 69.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 67.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 67.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 65.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 58.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 57.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

71.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 50.4
FF:10164-103B2 76 years, female 50.4
Nucleus accumbens
Scaled Tags Per Million: 56.9
FF:10037-101F1 23-56 years, mixed 56.9
Putamen
Scaled Tags Per Million: 71.0
FF:10176-103C5 60 years, female 71.0
Globus pallidus
Scaled Tags Per Million: 44.6
FF:10161-103A8 76 years, female 47.7
FF:10175-103C4 60 years, female 41.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.3
Pig sample Sample description nTPM
Caudate
nTPM: 107.1
Samples: 4

Max nTPM: 128.4
Min nTPM: 86.8
Sample A Female 86.8
Sample B Female 116.9
Sample C Male 128.4
Sample D Male 96.1
Putamen
nTPM: 117.3
Samples: 4

Max nTPM: 155.9
Min nTPM: 94.4
Sample A Female 107.8
Sample B Female 94.4
Sample C Male 155.9
Sample D Male 111.1
Septum
nTPM: 96.3
Samples: 4

Max nTPM: 104.5
Min nTPM: 88.7
Sample A Female 97.9
Sample B Female 94.0
Sample C Male 104.5
Sample D Male 88.7
Ventral pallidum
nTPM: 103.5
Samples: 4

Max nTPM: 124.8
Min nTPM: 83.2
Sample A Female 83.2
Sample B Female 114.5
Sample C Male 124.8
Sample D Male 91.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 148.0
Samples: 4

Max nTPM: 150.8
Min nTPM: 144.8
Sample A Male 146.0
Sample B Male 150.2
Sample C Female 144.8
Sample D Female 150.8
Septum
nTPM: 176.4
Samples: 4

Max nTPM: 190.1
Min nTPM: 159.2
Sample A Male 168.1
Sample B Male 190.1
Sample C Female 188.2
Sample D Female 159.2
Ventral forebrain
nTPM: 191.5
Samples: 4

Max nTPM: 212.4
Min nTPM: 179.3
Sample A Male 181.2
Sample B Male 179.3
Sample C Female 212.4
Sample D Female 193.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.1
323186 Antisense, RP_040617_02_B10, Mouse strain C57BL/6J (56 days, male) 13.1
357103 Antisense, RP_040617_02_B10, Mouse strain C57BL/6J (56 days, male) 9.4
Pallidum
Expression energy: 13.7
323186 Antisense, RP_040617_02_B10, Mouse strain C57BL/6J (56 days, male) 13.7
357103 Antisense, RP_040617_02_B10, Mouse strain C57BL/6J (56 days, male) 10.2

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