COLON - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:95.9 nTPM
HPA:17.5 nTPM
GTEx:95.9 nTPM
FANTOM5:89.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPMi 17.5
overview
Male, age 54
Colon sample 67
nTPM: 12.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 30.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 12
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 14.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 25
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 13.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 14
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 13.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 15.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 4.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 9.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 7.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 54.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 95.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 95.9
Samples: 373

Max nTPM: 404.8
Min nTPM: 8.2
Std nTPM: 49.7
Median nTPM: 90.1
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 404.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 316.6
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 240.6
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 238.8
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 235.4
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 225.6
GTEX-1B996-2726-SM-7DUGG 60-69 years, male 223.8
GTEX-1GMR3-2526-SM-7P8QS 40-49 years, male 221.6
GTEX-17JCI-2826-SM-7IGNA 60-69 years, female 221.5
GTEX-1EMGI-2626-SM-7IGNR 60-69 years, male 214.7
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 211.6
Show allShow less
Colon - Transverse
Average nTPM: 63.7
Samples: 406

Max nTPM: 276.8
Min nTPM: 5.2
Std nTPM: 39.6
Median nTPM: 52.5
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 276.8
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 209.4
GTEX-1HKZK-2126-SM-A9SL3 40-49 years, male 198.5
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 178.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 175.8
GTEX-1B996-2626-SM-73KZ1 60-69 years, male 175.3
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 174.0
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 170.7
GTEX-1GMR3-2826-SM-9WPOG 40-49 years, male 159.0
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 154.1
GTEX-1QMI2-2626-SM-E6CR4 60-69 years, male 152.5
Show allShow less

COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 89.2
FF:10014-101C5 62,83,84 years, mixed 89.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org