HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:71.3 nTPM
HPA Brain:167.4 nTPM
GTEx:71.3 nTPM
FANTOM5:60.4 Scaled Tags Per Million
Pig:65.7 nTPM
Mouse:65.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005377
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 167.4
Sample id Sample description nTPM
Hippocampus
nTPM: 157.8
1911 Female, age 85, right hemisphere 175.0
1898 Male, age 80, left hemisphere 162.1
2148 Female, age 91, left hemisphere 155.6
2529 Female, age 94, left hemisphere 153.6
1855 Male, age 76, left hemisphere 153.1
2621 Female, age 67, right hemisphere 147.2
Dentate gyrus
nTPM: 157.5
2530 Female, age 94, left hemisphere 178.0
1927 Female, age 91, both hemispheres 161.6
2010 Male, age 76, both hemispheres 156.1
2246 Female, age 85, both hemispheres 152.9
2531 Female, age 67, both hemispheres 150.4
2528 Male, age 74, both hemispheres 145.9
Entorhinal gyrus
nTPM: 159.9
2686 Male, age 75, right hemisphere 183.0
1938 Female, age 85, left hemisphere 168.3
2117 Female, age 91, right hemisphere 163.1
2613 Female, age 94, left hemisphere 151.6
1787 Male, age 76, left hemisphere 150.9
2764 Male, age 80, right hemisphere 142.8
Hippocampus, CA1
nTPM: 152.2
2749 Male, age 80, left hemisphere 165.6
1873 Female, age 85, both hemispheres 161.8
2527 Male, age 74, both hemispheres 154.0
2082 Female, age 91, right hemisphere 146.1
2045 Male, age 76, both hemispheres 133.4
Hippocampus, CA2
nTPM: 159.5
1963 Male, age 80, left hemisphere 165.6
1940 Female, age 85, left hemisphere 162.8
1892 Male, age 76, both hemispheres 161.8
2113 Female, age 91, right hemisphere 160.8
2437 Female, age 94, left hemisphere 153.1
2249 Male, age 74, both hemispheres 152.7
Hippocampus, CA3
nTPM: 148.4
1891 Female, age 85, both hemispheres 176.4
2137 Male, age 80, left hemisphere 165.8
1867 Male, age 76, both hemispheres 156.1
2620 Female, age 94, left hemisphere 133.5
2861 Female, age 67, both hemispheres 130.5
2436 Male, age 74, both hemispheres 127.9
Parahippocampal cortex
nTPM: 153.1
1850 Male, age 80, both hemispheres 185.1
2692 Male, age 74, both hemispheres 165.9
1933 Female, age 85, both hemispheres 162.6
2532 Female, age 72, left hemisphere 159.8
1990 Female, age 91, right hemisphere 153.8
2245 Female, age 91, both hemispheres 151.1
2250 Female, age 67, right hemisphere 146.3
2693 Female, age 94, both hemispheres 136.4
2622 Female, age 67, right hemisphere 135.9
2018 Male, age 76, both hemispheres 133.7
Perirhinal gyrus
nTPM: 151.9
1841 Female, age 85, right hemisphere 160.3
1847 Female, age 91, left hemisphere 156.4
1794 Male, age 80, right hemisphere 151.4
2848 Male, age 76, right hemisphere 150.4
2521 Female, age 94, right hemisphere 140.9
Subiculum
nTPM: 167.4
2438 Female, age 94, left hemisphere 204.1
1901 Male, age 80, both hemispheres 182.7
2042 Male, age 76, both hemispheres 166.9
1977 Female, age 85, both hemispheres 154.7
2729 Female, age 91, right hemisphere 151.2
2619 Male, age 74, both hemispheres 144.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 71.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.3
Samples: 197

Max nTPM: 219.3
Min nTPM: 15.8
Std nTPM: 27.1
Median nTPM: 66.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 219.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 182.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 167.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 154.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 154.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 149.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 136.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 134.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 131.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 127.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 121.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 60.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.4
FF:10153-102I9 76 years, female 61.6
FF:10169-103B7 60 years, female 59.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 65.7
Pig sample Sample description nTPM
Subiculum
nTPM: 62.7
Samples: 4

Max nTPM: 75.0
Min nTPM: 58.2
Sample A Female 75.0
Sample B Female 58.8
Sample C Male 58.8
Sample D Male 58.2
Dorsal hippocampus
nTPM: 65.8
Samples: 4

Max nTPM: 81.0
Min nTPM: 50.0
Sample A Female 69.9
Sample B Female 62.1
Sample C Male 81.0
Sample D Male 50.0
Entorhinal cortex
nTPM: 60.6
Samples: 4

Max nTPM: 66.6
Min nTPM: 57.0
Sample A Female 57.0
Sample B Female 66.6
Sample C Male 59.9
Sample D Male 58.9
Ventral hippocampus
nTPM: 58.1
Samples: 4

Max nTPM: 62.9
Min nTPM: 51.7
Sample A Female 57.1
Sample B Female 51.7
Sample C Male 60.6
Sample D Male 62.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 65.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.6
Samples: 4

Max nTPM: 57.6
Min nTPM: 55.0
Sample A Male 57.3
Sample B Male 55.0
Sample C Female 57.6
Sample D Female 56.5
Hippocampal formation
nTPM: 65.0
Samples: 4

Max nTPM: 79.6
Min nTPM: 57.2
Sample A Male 57.2
Sample B Male 63.0
Sample C Female 79.6
Sample D Female 60.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
77620471 Antisense, RP_070129_03_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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