PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		91.298
Mouse brain, Intensity
Ponsi 		101.936
RNA expressioni
HPA Brain:229.3 nTPM
FANTOM5:134.3 Scaled Tags Per Million
Pig:53.9 nTPM
Mouse:30.1 nTPM
Allen mouse:0.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA024797
Medulla oblongata mean intensity 91.298
intensityi
FRONT BACK
Nucleus of the solitary tract 62.736
Raphe magnus nucleus 9.021
Cochlear nucleus 13.271
Lateral paragigantocellular nucleus 25.793
Raphe pallidus nucleus 69.626
Facial nucleus 40.592
Hypoglossal nucleus 23.983
Ambiguus nucleus 36.495
External cuneate nucleus 38.323
Inferior olivary nucleus 29.380
Raphe obscures nucleus 41.445
Dorsal motor nucleus of vagus 34.086
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus -
Parabrachial nucleus -
Principle sensory trigeminal nucleus 31.347
Locus coeruleus 101.936
Pontine nucleus 17.104
Vestibular nucleus 17.536
Pontine reticular nucleus, oral 10.699
Lateral lemniscus 3.756
Superior paraolivary nucleus 6.194

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 229.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 66.1
1984 Male, age 76, both hemispheres 90.7
2090 Male, age 80, both hemispheres 74.5
2301 Female, age 85, both hemispheres 53.8
2188 Female, age 91, both hemispheres 45.4
Area postrema
nTPM: 229.3
2799 Male, age 61, both hemispheres 357.8
2306 Male, age 80, both hemispheres 191.1
2054 Male, age 76, both hemispheres 139.0
Dorsal cochlear nucleus
nTPM: 93.6
2370 Male, age 61, both hemispheres 110.1
2058 Male, age 76, both hemispheres 106.1
2378 Male, age 80, both hemispheres 100.8
2802 Male, age 74, right hemisphere 91.5
2187 Female, age 91, both hemispheres 59.3
Dorsal medullary reticular nucleus
nTPM: 74.3
2373 Male, age 61, both hemispheres 84.5
2088 Male, age 76, both hemispheres 83.5
2040 Female, age 85, both hemispheres 54.9
Dorsal motor vagal complex
nTPM: 145.8
2797 Male, age 61, both hemispheres 240.3
2643 Male, age 74, both hemispheres 204.6
2185 Male, age 76, both hemispheres 183.1
2844 Male, age 55, unknown 134.0
2813 Female, age 72, unknown 118.0
2807 Female, age 85, both hemispheres 117.7
2000 Male, age 74, unknown 95.2
2133 Female, age 91, both hemispheres 73.8
Dorsal tegmental nucleus
nTPM: 84.4
2358 Male, age 61, both hemispheres 106.4
1936 Male, age 76, left hemisphere 104.2
2083 Male, age 80, both hemispheres 67.8
2326 Male, age 74, both hemispheres 59.2
Dorsolateral tegmental area
nTPM: 70.3
2141 Male, age 76, both hemispheres 84.4
2654 Male, age 80, both hemispheres 73.6
2360 Male, age 74, both hemispheres 72.7
2337 Male, age 61, both hemispheres 65.8
2751 Female, age 85, both hemispheres 55.1
Gigantocellular reticular nuclei, medullary
nTPM: 68.6
2314 Male, age 61, both hemispheres 98.8
2022 Male, age 76, right hemisphere 80.4
2387 Female, age 91, both hemispheres 65.2
2462 Male, age 74, both hemispheres 59.5
1876 Female, age 85, both hemispheres 58.0
2310 Male, age 80, both hemispheres 49.6
Gigantocellular reticular nuclei, pars
nTPM: 64.8
2336 Male, age 61, both hemispheres 69.6
2330 Male, age 80, both hemispheres 66.8
2706 Male, age 80, both hemispheres 64.8
2168 Male, age 76, both hemispheres 62.1
2084 Female, age 85, both hemispheres 60.9
Inferior olive
nTPM: 122.9
2379 Male, age 80, both hemispheres 149.9
2178 Male, age 61, both hemispheres 126.0
2085 Female, age 85, both hemispheres 121.2
2563 Male, age 74, both hemispheres 114.7
2628 Female, age 91, both hemispheres 102.8
Kolliker-Fuse nucleus
nTPM: 73.0
2315 Male, age 76, right hemisphere 112.3
2163 Male, age 80, both hemispheres 63.9
2793 Female, age 91, left hemisphere 42.8
Lateral lemniscal nuclei
nTPM: 49.8
2169 Male, age 76, both hemispheres 62.7
2746 Female, age 85, left hemisphere 56.9
2453 Male, age 74, right hemisphere 45.2
2320 Female, age 91, left hemisphere 44.6
2036 Male, age 80, both hemispheres 39.7
Lateral medullary reticular nucleus
nTPM: 94.5
2852 Male, age 80, both hemispheres 120.5
2804 Female, age 91, both hemispheres 117.3
2374 Male, age 61, both hemispheres 95.4
2190 Female, age 85, both hemispheres 91.9
2044 Male, age 76, both hemispheres 75.8
2305 Male, age 74, both hemispheres 66.2
Lateral parabrachial nucleus
nTPM: 75.3
2790 Male, age 61, both hemispheres 79.2
2792 Male, age 76, both hemispheres 78.9
2139 Female, age 85, right hemisphere 75.8
2013 Male, age 80, both hemispheres 67.1
Lateral vestibular nucleus
nTPM: 88.9
2184 Male, age 76, both hemispheres 92.3
2311 Male, age 80, both hemispheres 85.6
Locus coeruleus
nTPM: 74.6
1980 Male, age 76, both hemispheres 90.8
2317 Female, age 72, unknown 88.7
2014 Male, age 55, unknown 76.5
2123 Female, age 91, both hemispheres 75.6
2162 Male, age 80, both hemispheres 70.7
2788 Male, age 74, unknown 68.8
2720 Male, age 74, both hemispheres 51.4
Medial olivary nucleus
nTPM: 101.6
2138 Female, age 91, both hemispheres 138.8
1943 Male, age 61, both hemispheres 101.5
2851 Male, age 80, both hemispheres 90.7
1962 Male, age 76, both hemispheres 75.6
Medial parabrachial nucleus
nTPM: 73.2
2156 Male, age 61, both hemispheres 93.8
2786 Male, age 76, both hemispheres 85.1
2463 Female, age 85, right hemisphere 78.6
2170 Female, age 91, both hemispheres 58.9
2854 Male, age 80, both hemispheres 49.7
Medial periolivary nuclei
nTPM: 55.0
2063 Male, age 76, both hemispheres 68.4
2791 Male, age 74, right hemisphere 63.6
2081 Male, age 80, both hemispheres 54.4
2458 Female, age 91, both hemispheres 46.5
2171 Female, age 85, both hemispheres 42.3
Medial vestibular nucleus
nTPM: 66.6
2134 Male, age 76, both hemispheres 90.1
2743 Female, age 85, both hemispheres 80.3
2624 Male, age 61, both hemispheres 74.9
2093 Male, age 80, both hemispheres 54.5
2801 Male, age 74, both hemispheres 50.6
2803 Female, age 91, both hemispheres 49.4
Motor facial nucleus
nTPM: 56.5
2795 Female, age 91, both hemispheres 86.7
2062 Male, age 76, both hemispheres 74.2
2126 Male, age 61, both hemispheres 65.1
2365 Male, age 74, right hemisphere 42.3
2327 Male, age 80, both hemispheres 38.1
2697 Female, age 85, both hemispheres 32.5
Motor hypoglossal nucleus
nTPM: 72.5
2277 Male, age 76, both hemispheres 110.0
2461 Male, age 61, both hemispheres 80.7
2182 Male, age 80, both hemispheres 69.7
2125 Female, age 91, both hemispheres 63.7
2132 Female, age 85, both hemispheres 38.4
Motor trigeminal nucleus
nTPM: 58.9
2309 Male, age 76, both hemispheres 90.3
2335 Male, age 61, both hemispheres 70.7
2560 Male, age 74, both hemispheres 47.1
2321 Female, age 91, both hemispheres 46.8
2079 Male, age 80, both hemispheres 39.9
Nuclei of the trapezoid body
nTPM: 53.3
1983 Male, age 76, both hemispheres 70.2
2368 Female, age 91, both hemispheres 65.6
2166 Male, age 80, both hemispheres 47.3
2735 Female, age 85, both hemispheres 43.9
2159 Male, age 61, both hemispheres 39.3
Nucleus ambiguus
nTPM: 85.7
2071 Male, age 76, both hemispheres 116.3
2096 Female, age 85, both hemispheres 55.2
Nucleus cuneatus
nTPM: 109.1
2564 Male, age 74, both hemispheres 131.8
2380 Male, age 80, both hemispheres 127.0
2562 Male, age 61, both hemispheres 122.9
2808 Female, age 85, both hemispheres 116.1
2805 Female, age 91, both hemispheres 115.5
2100 Male, age 76, both hemispheres 111.5
2376 Male, age 61, both hemispheres 92.6
2131 Male, age 76, both hemispheres 90.6
2381 Male, age 80, both hemispheres 73.9
Nucleus gracilis
nTPM: 121.7
2627 Male, age 74, both hemispheres 132.4
2299 Female, age 85, both hemispheres 132.2
2382 Male, age 80, both hemispheres 100.6
Nucleus raphe magnus
nTPM: 50.3
2051 Male, age 76, both hemispheres 83.9
2328 Male, age 80, both hemispheres 50.2
2459 Female, age 91, both hemispheres 48.4
2455 Male, age 74, both hemispheres 47.5
2160 Male, age 61, both hemispheres 43.1
2172 Female, age 85, both hemispheres 29.0
Nucleus raphe obscurus
nTPM: 77.3
2142 Male, age 76, midline 99.5
2800 Male, age 61, midline 76.2
2845 Female, age 85, midline 56.3
Nucleus raphe pallidus
nTPM: 82.5
1924 Male, age 61, midline 107.4
2145 Male, age 76, midline 73.7
2183 Male, age 80, midline 66.3
Nucleus tractus solitarii
nTPM: 112.9
2191 Female, age 85, both hemispheres 128.3
2307 Male, age 80, both hemispheres 127.4
2144 Female, age 91, right hemisphere 102.3
2656 Male, age 76, both hemispheres 93.8
Paramedian reticular nucleus
nTPM: 59.6
2313 Male, age 61, both hemispheres 68.3
2057 Male, age 80, both hemispheres 67.2
2052 Male, age 76, both hemispheres 59.4
2050 Female, age 85, both hemispheres 43.7
Parvicellular reticular nuclei
nTPM: 63.5
2095 Male, age 76, both hemispheres 74.0
2119 Male, age 80, both hemispheres 71.2
2558 Male, age 74, both hemispheres 45.2
Parvicellular reticular nuclei, medullary
nTPM: 69.0
2181 Male, age 80, left hemisphere 81.0
2091 Female, age 85, both hemispheres 63.4
2189 Female, age 91, both hemispheres 62.7
Pedunculopontine tegmental nucleus
nTPM: 68.8
1921 Female, age 85, both hemispheres 77.2
2334 Male, age 80, both hemispheres 74.8
2338 Male, age 61, both hemispheres 54.5
Peritrigeminal nucleus
nTPM: 95.9
2067 Female, age 85, both hemispheres 117.3
2136 Male, age 76, both hemispheres 94.4
2179 Male, age 61, both hemispheres 76.0
Pontine nuclei
nTPM: 46.3
1968 Male, age 76, left hemisphere 73.0
2115 Male, age 80, left hemisphere 52.3
1863 Male, age 55, unknown 51.5
2319 Female, age 91, both hemispheres 43.8
2109 Female, age 72, unknown 41.6
2787 Female, age 85, both hemispheres 38.8
2727 Male, age 61, right hemisphere 37.9
2454 Male, age 74, left hemisphere 31.5
Pontine raphe nucleus
nTPM: 66.1
2853 Male, age 76, midline 84.1
2122 Female, age 85, midline 48.0
Posteroventral cochlear nucleus
nTPM: 64.8
2371 Male, age 61, both hemispheres 99.2
2070 Male, age 76, both hemispheres 64.0
2341 Male, age 80, both hemispheres 58.0
2752 Female, age 85, both hemispheres 57.3
2135 Female, age 91, both hemispheres 45.7
Prepositus hypoglossal nucleus
nTPM: 91.6
2086 Male, age 80, both hemispheres 120.2
2855 Female, age 85, right hemisphere 63.0
Principal sensory trigeminal nucleus
nTPM: 58.1
2324 Male, age 76, both hemispheres 105.4
2158 Male, age 61, both hemispheres 45.7
2008 Male, age 80, left hemisphere 42.3
2367 Female, age 91, left hemisphere 39.1
Reticular pontine nucleus, caudal
nTPM: 51.2
2092 Male, age 76, both hemispheres 72.2
2457 Female, age 91, both hemispheres 51.6
2332 Male, age 80, right hemisphere 42.2
2559 Male, age 74, both hemispheres 38.6
Reticular pontine nucleus, oral
nTPM: 52.3
2167 Male, age 76, both hemispheres 80.3
1939 Male, age 80, both hemispheres 61.4
2012 Female, age 85, both hemispheres 50.3
2366 Female, age 91, both hemispheres 44.3
2361 Male, age 74, both hemispheres 25.3
Reticulotegmental nucleus
nTPM: 65.8
2325 Male, age 76, both hemispheres 76.3
2333 Male, age 80, both hemispheres 71.1
2322 Female, age 91, both hemispheres 63.8
2452 Male, age 74, both hemispheres 52.1
Spinal trigeminal nucleus, caudal
nTPM: 83.4
2447 Male, age 76, both hemispheres 99.6
2308 Male, age 80, both hemispheres 96.4
2642 Male, age 74, both hemispheres 81.9
2312 Male, age 61, both hemispheres 80.9
2390 Female, age 91, both hemispheres 58.2
Spinal trigeminal nucleus, interpolar
nTPM: 65.6
2625 Male, age 61, both hemispheres 72.5
2033 Male, age 80, both hemispheres 66.3
2066 Male, age 76, right hemisphere 65.6
2389 Female, age 91, both hemispheres 62.4
2386 Female, age 85, both hemispheres 61.2
Spinal trigeminal nucleus, oral
nTPM: 69.2
1978 Male, age 76, both hemispheres 81.2
2737 Female, age 85, both hemispheres 70.6
2164 Male, age 80, both hemispheres 55.8
Spinal vestibular nucleus
nTPM: 65.1
2796 Male, age 61, both hemispheres 77.7
2748 Male, age 76, both hemispheres 76.4
2780 Male, age 80, both hemispheres 67.1
2806 Female, age 85, both hemispheres 58.5
2384 Male, age 74, both hemispheres 57.6
2186 Female, age 91, both hemispheres 53.4
Subcoeruleus area
nTPM: 60.6
2451 Male, age 74, both hemispheres 65.1
2323 Female, age 91, left hemisphere 64.6
2089 Male, age 76, left hemisphere 62.8
1958 Male, age 80, both hemispheres 56.5
2369 Female, age 85, left hemisphere 54.1
Superior olive
nTPM: 50.9
2020 Male, age 76, both hemispheres 62.5
2364 Male, age 74, right hemisphere 59.6
2561 Female, age 91, both hemispheres 47.3
2329 Male, age 80, right hemisphere 42.8
1875 Female, age 85, both hemispheres 42.3
Superior vestibular nucleus
nTPM: 99.0
2061 Male, age 76, both hemispheres 122.5
2015 Male, age 80, both hemispheres 91.2
2383 Male, age 74, both hemispheres 83.4
Ventral medullary reticular nucleus
nTPM: 86.9
2372 Male, age 61, both hemispheres 102.5
2060 Male, age 76, both hemispheres 71.3
Ventral periolivary nuclei
nTPM: 47.7
2023 Male, age 76, both hemispheres 54.7
2130 Female, age 85, both hemispheres 49.7
2165 Male, age 80, both hemispheres 46.8
2794 Female, age 91, left hemisphere 39.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 82.9
2302 Female, age 91, both hemispheres 101.1
2180 Male, age 61, both hemispheres 84.5
1986 Male, age 76, both hemispheres 81.7
2741 Female, age 85, both hemispheres 77.7
2118 Male, age 80, both hemispheres 69.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 57.2
2359 Male, age 61, both hemispheres 66.7
1959 Male, age 76, both hemispheres 64.7
2456 Female, age 91, both hemispheres 59.5
2161 Male, age 80, both hemispheres 57.4
2840 Female, age 85, both hemispheres 50.6
2449 Male, age 74, both hemispheres 44.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 134.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 111.6
FF:10182-103D2 60 years, female 145.9
FF:10165-103B3 76 years, female 77.3
Medulla oblongata
Scaled Tags Per Million: 134.3
FF:10174-103C3 60 years, female 178.8
FF:10155-103A2 76 years, female 114.8
FF:10038-101F2 18-64 years, mixed 109.3
Pons
Scaled Tags Per Million: 39.2
FF:10033-101E6 18-54 years, mixed 39.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 53.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 53.9
Samples: 4

Max nTPM: 68.6
Min nTPM: 47.8
Sample A Female 48.4
Sample B Female 47.8
Sample C Male 50.8
Sample D Male 68.6
Pons
nTPM: 42.1
Samples: 4

Max nTPM: 51.6
Min nTPM: 30.3
Sample A Female 51.0
Sample B Female 30.3
Sample C Male 35.3
Sample D Male 51.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 30.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 30.1
Samples: 4

Max nTPM: 34.6
Min nTPM: 28.2
Sample A Male 34.6
Sample B Male 29.1
Sample C Female 28.3
Sample D Female 28.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.2
71723875 Antisense, RP_050921_01_A11, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.2
71723875 Antisense, RP_050921_01_A11, Mouse strain C57BL/6J (56 days, male) 0.2

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