HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.7 nTPM
HPA Brain:42.3 nTPM
GTEx:19.7 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:33.9 nTPM
Mouse:42.5 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047369Antibody HPA051484
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 42.3
Sample id Sample description nTPM
Hippocampus
nTPM: 37.6
2148 Female, age 91, left hemisphere 43.8
1911 Female, age 85, right hemisphere 38.9
2621 Female, age 67, right hemisphere 38.9
1855 Male, age 76, left hemisphere 37.2
2529 Female, age 94, left hemisphere 34.1
1898 Male, age 80, left hemisphere 32.7
Dentate gyrus
nTPM: 39.2
1927 Female, age 91, both hemispheres 44.0
2531 Female, age 67, both hemispheres 42.4
2246 Female, age 85, both hemispheres 39.1
2010 Male, age 76, both hemispheres 38.7
2530 Female, age 94, left hemisphere 38.0
2528 Male, age 74, both hemispheres 32.9
Entorhinal gyrus
nTPM: 39.9
2686 Male, age 75, right hemisphere 47.6
2613 Female, age 94, left hemisphere 46.3
1938 Female, age 85, left hemisphere 38.5
1787 Male, age 76, left hemisphere 38.0
2764 Male, age 80, right hemisphere 37.2
2117 Female, age 91, right hemisphere 32.1
Hippocampus, CA1
nTPM: 41.2
2082 Female, age 91, right hemisphere 44.1
2045 Male, age 76, both hemispheres 43.8
2749 Male, age 80, left hemisphere 40.9
2527 Male, age 74, both hemispheres 38.9
1873 Female, age 85, both hemispheres 38.4
Hippocampus, CA2
nTPM: 38.4
2113 Female, age 91, right hemisphere 42.2
2437 Female, age 94, left hemisphere 39.5
1940 Female, age 85, left hemisphere 39.1
1892 Male, age 76, both hemispheres 38.3
1963 Male, age 80, left hemisphere 37.6
2249 Male, age 74, both hemispheres 33.6
Hippocampus, CA3
nTPM: 42.3
2137 Male, age 80, left hemisphere 54.8
2861 Female, age 67, both hemispheres 45.8
2620 Female, age 94, left hemisphere 44.4
2436 Male, age 74, both hemispheres 37.6
1891 Female, age 85, both hemispheres 35.6
1867 Male, age 76, both hemispheres 35.4
Parahippocampal cortex
nTPM: 39.6
2693 Female, age 94, both hemispheres 46.8
2622 Female, age 67, right hemisphere 43.1
2245 Female, age 91, both hemispheres 40.4
2692 Male, age 74, both hemispheres 40.0
2532 Female, age 72, left hemisphere 39.3
2018 Male, age 76, both hemispheres 39.2
1990 Female, age 91, right hemisphere 38.1
2250 Female, age 67, right hemisphere 37.7
1850 Male, age 80, both hemispheres 36.1
1933 Female, age 85, both hemispheres 35.7
Perirhinal gyrus
nTPM: 36.1
2848 Male, age 76, right hemisphere 39.1
2521 Female, age 94, right hemisphere 38.6
1847 Female, age 91, left hemisphere 36.8
1841 Female, age 85, right hemisphere 33.2
1794 Male, age 80, right hemisphere 32.9
Subiculum
nTPM: 39.0
1901 Male, age 80, both hemispheres 44.5
2729 Female, age 91, right hemisphere 41.0
2619 Male, age 74, both hemispheres 39.7
2042 Male, age 76, both hemispheres 39.5
1977 Female, age 85, both hemispheres 37.2
2438 Female, age 94, left hemisphere 32.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.7
Samples: 197

Max nTPM: 43.8
Min nTPM: 12.1
Std nTPM: 3.7
Median nTPM: 19.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 33.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 31.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 28.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 28.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 27.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 26.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 25.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 25.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 25.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 25.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10169-103B7 60 years, female 31.1
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 33.9
Pig sample Sample description nTPM
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 35.2
Min nTPM: 26.7
Sample A Female 35.2
Sample B Female 28.6
Sample C Male 28.1
Sample D Male 26.7
Dorsal hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 40.5
Min nTPM: 27.4
Sample A Female 40.5
Sample B Female 35.0
Sample C Male 32.7
Sample D Male 27.4
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 30.8
Min nTPM: 24.6
Sample A Female 30.5
Sample B Female 30.8
Sample C Male 28.5
Sample D Male 24.6
Ventral hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 37.6
Min nTPM: 25.0
Sample A Female 31.5
Sample B Female 25.0
Sample C Male 34.8
Sample D Male 37.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 42.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.9
Samples: 4

Max nTPM: 44.5
Min nTPM: 39.9
Sample A Male 44.5
Sample B Male 40.0
Sample C Female 43.0
Sample D Female 39.9
Hippocampal formation
nTPM: 42.6
Samples: 4

Max nTPM: 44.0
Min nTPM: 41.1
Sample A Male 43.0
Sample B Male 41.1
Sample C Female 44.0
Sample D Female 42.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
68269038 Antisense, RP_041208_01_F01, Mouse strain C57BL/6J (56 days, male) 5.0
77869146 Antisense, RP_070205_01_A12, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org