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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:103.3 nTPM
HPA Brain:69.4 nTPM
GTEx:103.3 nTPM
FANTOM5:181.2 Scaled Tags Per Million
Pig:80.9 nTPM
Mouse:212.8 nTPM
Allen mouse:1.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047694
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 61.3
1857 Female, age 85, left hemisphere 68.5
2481 Female, age 94, left hemisphere 64.6
2290 Female, age 72, unknown 63.9
2846 Female, age 79, unknown 62.6
1781 Male, age 74, unknown 61.2
1854 Male, age 80, left hemisphere 60.7
2288 Male, age 75, left hemisphere 57.6
2289 Male, age 61, right hemisphere 51.0
Globus pallidus, externus
nTPM: 69.4
2772 Female, age 79, unknown 76.6
2395 Male, age 75, both hemispheres 74.7
1996 Male, age 80, right hemisphere 71.4
2646 Male, age 61, right hemisphere 62.7
2567 Female, age 72, unknown 61.6
Globus pallidus, internus
nTPM: 69.2
2287 Male, age 75, right hemisphere 79.4
2483 Female, age 94, right hemisphere 75.8
2778 Female, age 91, both hemispheres 71.8
1818 Male, age 74, unknown 69.0
2111 Female, age 85, right hemisphere 65.1
2037 Male, age 80, right hemisphere 62.9
2566 Female, age 72, unknown 60.6
Nucleus accumbens
nTPM: 63.2
2391 Female, age 94, left hemisphere 67.7
1806 Female, age 85, left hemisphere 67.0
2698 Female, age 72, unknown 66.9
1783 Male, age 74, unknown 65.7
2824 Male, age 61, right hemisphere 62.7
2286 Male, age 75, left hemisphere 61.1
1856 Female, age 91, right hemisphere 60.0
2732 Male, age 80, right hemisphere 54.6
Nucleus basalis of Meynert
nTPM: 57.9
2569 Male, age 61, both hemispheres 70.6
2484 Female, age 94, left hemisphere 55.4
2393 Male, age 80, right hemisphere 54.1
2821 Male, age 75, both hemispheres 51.5
Nucleus of the diagonal band
nTPM: 64.6
1812 Female, age 91, both hemispheres 72.7
2775 Male, age 80, right hemisphere 70.9
2029 Male, age 61, right hemisphere 62.0
2195 Female, age 85, both hemispheres 59.9
1979 Male, age 74, unknown 57.5
Putamen
nTPM: 58.4
2647 Male, age 75, left hemisphere 64.3
1937 Female, age 91, right hemisphere 61.3
2482 Female, age 94, left hemisphere 60.7
2466 Female, age 79, unknown 58.6
1829 Male, age 74, unknown 56.0
2489 Female, age 72, unknown 54.4
1838 Male, age 80, right hemisphere 53.4
Septal nuclei
nTPM: 62.8
1960 Male, age 74, unknown 76.4
2031 Female, age 72, unknown 74.7
2394 Male, age 61, left hemisphere 64.6
2009 Female, age 91, both hemispheres 59.0
2199 Male, age 80, right hemisphere 56.1
2059 Female, age 85, both hemispheres 55.3
2629 Female, age 94, right hemisphere 53.2
Stria terminalis, bed nucleus
nTPM: 53.4
1974 Female, age 91, both hemispheres 63.1
2201 Male, age 74, unknown 50.5
2486 Female, age 94, both hemispheres 46.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 99.1
Samples: 246

Max nTPM: 152.6
Min nTPM: 70.0
Std nTPM: 14.7
Median nTPM: 96.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 152.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 144.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 137.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 137.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 137.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 135.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 133.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 130.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 130.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 130.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 129.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 126.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 125.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 125.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 125.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 123.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 123.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 123.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 122.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 122.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 121.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 120.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 120.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 120.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 118.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 118.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 116.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 116.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 116.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 115.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 115.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 115.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 115.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 114.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 114.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 114.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 114.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 114.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 114.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 113.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 113.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 113.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 113.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 113.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 112.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 112.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 112.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 112.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 112.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 112.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 111.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 111.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 110.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 110.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 109.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 108.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 108.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 107.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 107.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 107.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 107.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 107.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 107.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 106.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 106.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 105.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 105.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 105.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 104.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 104.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 104.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 104.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 103.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 103.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 103.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 103.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 103.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 103.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 102.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 102.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 102.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 102.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 102.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 102.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 101.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 101.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 100.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 100.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 100.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 100.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 100.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 99.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 99.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 99.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 99.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 99.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 99.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 99.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 98.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 98.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 98.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 98.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 98.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 98.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 98.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 98.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 97.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 97.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 97.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 97.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 96.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 96.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 96.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 96.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 96.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 96.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 96.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 96.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 96.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 95.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 95.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 95.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 95.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 95.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 94.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 94.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 94.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 94.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 94.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 94.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 94.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 94.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 94.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 94.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 94.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 94.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 94.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 94.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 94.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 94.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 94.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 94.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 93.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 93.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 93.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 93.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 93.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 93.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 93.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 93.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 93.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 92.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 92.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 92.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 92.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 92.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 92.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 92.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 92.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 92.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 92.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 91.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 91.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 91.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 91.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 91.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 91.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 91.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 91.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 91.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 90.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 90.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 90.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 90.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 89.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 89.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 89.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 89.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 89.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 89.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 89.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 89.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 88.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 88.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 88.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 88.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 87.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 87.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 87.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 87.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 87.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 86.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 86.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 86.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 85.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 85.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 85.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 84.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 84.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 84.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 83.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 83.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 83.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 82.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 82.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 81.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 81.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 81.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 81.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 80.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 80.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 79.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 79.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 79.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 79.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 79.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 79.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 78.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 77.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 77.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 77.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 77.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 76.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 76.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 75.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 74.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 74.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 73.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 73.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 70.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 70.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 102.0
Samples: 246

Max nTPM: 150.8
Min nTPM: 56.2
Std nTPM: 14.6
Median nTPM: 102.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 150.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 146.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 143.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 138.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 136.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 136.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 135.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 133.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 130.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 129.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 129.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 128.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 127.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 126.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 126.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 125.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 124.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 124.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 124.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 124.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 123.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 122.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 121.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 121.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 120.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 120.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 120.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 120.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 119.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 119.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 119.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 118.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 117.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 117.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 117.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 116.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 115.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 115.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 115.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 114.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 114.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 114.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 113.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 113.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 113.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 113.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 113.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 113.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 113.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 112.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 112.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 112.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 112.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 112.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 111.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 111.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 111.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 111.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 111.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 110.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 110.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 110.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 110.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 110.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 110.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 109.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 109.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 109.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 108.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 108.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 108.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 108.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 108.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 108.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 108.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 108.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 108.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 108.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 107.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 107.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 107.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 107.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 107.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 107.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 106.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 106.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 106.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 106.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 106.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 106.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 106.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 105.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 105.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 105.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 105.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 105.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 105.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 105.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 104.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 104.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 104.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 104.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 104.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 104.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 104.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 103.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 103.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 103.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 103.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 103.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 103.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 103.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 103.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 103.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 103.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 103.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 103.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 102.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 102.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 102.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 102.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 102.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 102.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 102.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 101.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 101.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 101.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 100.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 100.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 100.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 100.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 100.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 100.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 99.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 99.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 99.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 99.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 98.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 98.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 98.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 98.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 98.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 98.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 97.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 97.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 97.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 97.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 97.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 97.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 97.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 97.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 97.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 96.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 96.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 96.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 96.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 96.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 96.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 95.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 95.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 95.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 95.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 95.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 95.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 95.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 95.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 95.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 95.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 94.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 94.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 94.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 94.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 94.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 94.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 94.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 94.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 94.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 93.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 93.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 93.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 93.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 93.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 93.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 92.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 92.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 92.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 92.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 91.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 91.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 91.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 91.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 91.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 90.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 90.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 90.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 90.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 90.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 89.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 89.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 89.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 89.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 89.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 89.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 88.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 88.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 88.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 88.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 88.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 87.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 87.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 86.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 86.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 86.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 85.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 85.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 85.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 85.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 84.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 84.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 83.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 83.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 83.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 83.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 83.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 82.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 82.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 82.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 82.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 82.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 81.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 81.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 81.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 80.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 80.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 79.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 78.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 78.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 78.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 77.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 75.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 75.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 75.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 73.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 68.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 66.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 56.2
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Brain - Putamen (basal ganglia)
Average nTPM: 103.3
Samples: 205

Max nTPM: 161.1
Min nTPM: 60.0
Std nTPM: 15.0
Median nTPM: 101.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 161.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 158.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 150.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 145.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 143.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 141.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 135.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 131.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 130.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 130.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 130.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 127.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 127.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 124.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 123.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 123.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 123.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 121.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 121.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 121.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 121.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 120.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 120.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 119.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 119.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 119.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 119.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 119.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 118.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 118.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 118.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 117.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 117.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 117.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 116.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 116.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 115.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 115.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 115.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 114.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 114.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 113.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 113.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 113.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 113.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 112.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 112.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 112.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 112.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 112.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 112.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 112.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 111.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 111.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 111.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 110.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 110.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 110.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 110.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 110.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 110.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 109.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 109.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 108.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 108.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 108.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 108.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 108.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 108.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 107.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 107.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 107.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 107.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 107.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 106.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 106.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 106.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 106.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 106.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 106.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 106.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 106.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 104.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 104.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 104.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 104.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 104.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 103.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 103.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 103.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 103.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 103.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 103.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 103.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 103.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 102.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 102.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 102.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 102.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 102.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 101.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 101.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 101.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 101.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 101.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 101.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 101.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 100.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 100.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 100.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 99.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 99.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 99.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 99.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 99.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 99.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 99.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 99.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 99.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 98.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 98.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 98.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 98.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 98.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 98.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 97.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 97.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 97.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 97.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 97.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 97.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 97.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 96.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 96.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 96.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 96.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 96.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 96.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 96.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 96.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 95.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 95.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 94.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 94.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 94.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 93.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 93.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 93.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 93.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 93.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 93.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 92.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 92.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 92.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 92.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 92.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 92.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 92.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 92.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 91.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 91.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 91.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 91.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 91.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 91.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 90.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 90.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 90.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 90.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 90.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 89.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 89.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 88.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 88.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 88.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 88.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 88.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 88.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 88.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 88.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 87.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 87.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 87.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 87.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 87.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 86.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 86.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 86.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 86.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 85.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 85.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 85.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 84.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 83.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 83.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 82.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 82.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 82.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 81.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 81.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 76.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 76.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 75.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 75.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 60.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

181.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 181.2
FF:10164-103B2 76 years, female 181.2
Nucleus accumbens
Scaled Tags Per Million: 130.2
FF:10037-101F1 23-56 years, mixed 130.2
Putamen
Scaled Tags Per Million: 138.9
FF:10176-103C5 60 years, female 138.9
Globus pallidus
Scaled Tags Per Million: 153.8
FF:10161-103A8 76 years, female 179.0
FF:10175-103C4 60 years, female 128.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.9
Pig sample Sample description nTPM
Caudate
nTPM: 70.7
Samples: 4

Max nTPM: 75.3
Min nTPM: 62.4
Sample A Female 62.4
Sample B Female 75.3
Sample C Male 75.3
Sample D Male 69.6
Putamen
nTPM: 68.7
Samples: 4

Max nTPM: 79.4
Min nTPM: 58.1
Sample A Female 65.9
Sample B Female 58.1
Sample C Male 79.4
Sample D Male 71.3
Septum
nTPM: 80.9
Samples: 4

Max nTPM: 99.1
Min nTPM: 72.4
Sample A Female 78.3
Sample B Female 72.4
Sample C Male 99.1
Sample D Male 73.7
Ventral pallidum
nTPM: 72.4
Samples: 4

Max nTPM: 89.8
Min nTPM: 61.8
Sample A Female 61.8
Sample B Female 74.6
Sample C Male 89.8
Sample D Male 63.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 186.3
Samples: 4

Max nTPM: 187.1
Min nTPM: 184.9
Sample A Male 184.9
Sample B Male 187.1
Sample C Female 187.1
Sample D Female 185.9
Septum
nTPM: 212.8
Samples: 4

Max nTPM: 240.3
Min nTPM: 198.7
Sample A Male 198.7
Sample B Male 240.3
Sample C Female 210.9
Sample D Female 201.2
Ventral forebrain
nTPM: 182.6
Samples: 4

Max nTPM: 197.1
Min nTPM: 172.7
Sample A Male 172.7
Sample B Male 182.9
Sample C Female 197.1
Sample D Female 177.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.9
748 Antisense, RP_Baylor_102940, Mouse strain C57BL/6J (56 days, male) 0.9
749 Antisense, RP_Baylor_102940, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 1.3
748 Antisense, RP_Baylor_102940, Mouse strain C57BL/6J (56 days, male) 1.3
749 Antisense, RP_Baylor_102940, Mouse strain C57BL/6J (56 days, male) 0.6

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