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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:51.1 nTPM
HPA Brain:32.6 nTPM
GTEx:51.1 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:13.5 nTPM
Mouse:9.8 nTPM
Allen mouse:1.3 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040734
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 18.3
1857 Female, age 85, left hemisphere 34.8
1854 Male, age 80, left hemisphere 29.0
2290 Female, age 72, unknown 21.1
1781 Male, age 74, unknown 18.2
2288 Male, age 75, left hemisphere 16.1
2846 Female, age 79, unknown 10.8
2289 Male, age 61, right hemisphere 9.5
2481 Female, age 94, left hemisphere 6.7
Globus pallidus, externus
nTPM: 8.8
2772 Female, age 79, unknown 10.6
2395 Male, age 75, both hemispheres 9.7
1996 Male, age 80, right hemisphere 9.1
2567 Female, age 72, unknown 8.4
2646 Male, age 61, right hemisphere 6.1
Globus pallidus, internus
nTPM: 10.1
2287 Male, age 75, right hemisphere 14.0
2111 Female, age 85, right hemisphere 11.1
1818 Male, age 74, unknown 10.5
2566 Female, age 72, unknown 10.2
2778 Female, age 91, both hemispheres 9.4
2037 Male, age 80, right hemisphere 8.9
2483 Female, age 94, right hemisphere 6.3
Nucleus accumbens
nTPM: 32.6
1856 Female, age 91, right hemisphere 53.9
1783 Male, age 74, unknown 43.6
1806 Female, age 85, left hemisphere 41.5
2824 Male, age 61, right hemisphere 38.3
2698 Female, age 72, unknown 34.7
2286 Male, age 75, left hemisphere 18.8
2391 Female, age 94, left hemisphere 15.8
2732 Male, age 80, right hemisphere 14.2
Nucleus basalis of Meynert
nTPM: 7.3
2821 Male, age 75, both hemispheres 9.8
2393 Male, age 80, right hemisphere 6.7
2484 Female, age 94, left hemisphere 6.7
2569 Male, age 61, both hemispheres 5.8
Nucleus of the diagonal band
nTPM: 11.4
2195 Female, age 85, both hemispheres 14.4
1812 Female, age 91, both hemispheres 13.9
2775 Male, age 80, right hemisphere 11.8
2029 Male, age 61, right hemisphere 10.4
1979 Male, age 74, unknown 6.3
Putamen
nTPM: 13.8
1937 Female, age 91, right hemisphere 29.1
1838 Male, age 80, right hemisphere 27.6
2482 Female, age 94, left hemisphere 10.5
1829 Male, age 74, unknown 8.5
2647 Male, age 75, left hemisphere 8.2
2466 Female, age 79, unknown 6.9
2489 Female, age 72, unknown 6.1
Septal nuclei
nTPM: 11.1
1960 Male, age 74, unknown 18.8
2629 Female, age 94, right hemisphere 12.1
2031 Female, age 72, unknown 11.5
2009 Female, age 91, both hemispheres 11.2
2394 Male, age 61, left hemisphere 9.9
2059 Female, age 85, both hemispheres 9.5
2199 Male, age 80, right hemisphere 5.0
Stria terminalis, bed nucleus
nTPM: 10.2
2486 Female, age 94, both hemispheres 11.9
1974 Female, age 91, both hemispheres 10.1
2201 Male, age 74, unknown 8.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 20.8
Samples: 246

Max nTPM: 87.7
Min nTPM: 2.5
Std nTPM: 13.8
Median nTPM: 16.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 87.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 83.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 71.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 63.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 60.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 60.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 60.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 57.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 57.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 56.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 56.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 51.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 50.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 49.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 45.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 44.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 44.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 42.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 41.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 41.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 40.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 40.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 40.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 38.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 37.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 37.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 35.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 34.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 32.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 31.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 31.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 31.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 31.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 31.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 31.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 30.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 30.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 30.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 28.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 28.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 28.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 27.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 27.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 27.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 26.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 26.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 26.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 26.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 26.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 26.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 25.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 25.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 25.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 24.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 24.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 24.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 24.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 24.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 24.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 23.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 23.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 23.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 23.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 22.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 22.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 22.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 22.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 22.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 21.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 21.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 21.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 21.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 21.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 21.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 20.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 20.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 20.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 20.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 20.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 19.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 19.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 19.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 19.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 19.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 19.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 19.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 18.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 18.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 18.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 18.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 18.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 18.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 18.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 18.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 18.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 18.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 18.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 18.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 18.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 17.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 17.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 17.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 17.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 17.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 17.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 17.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 17.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 17.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 17.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 17.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 17.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 16.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 16.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 16.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 16.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 16.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 16.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 16.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 16.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 16.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 15.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 15.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 15.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 15.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 15.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 15.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 15.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 15.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 15.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 15.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 15.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 15.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 15.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 15.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 15.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 15.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 14.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 14.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 14.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 14.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 14.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 14.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 14.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 14.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 14.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 14.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 14.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 14.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 13.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 13.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 13.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 13.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 13.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 13.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 13.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 13.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 13.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 13.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 13.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 13.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 12.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 12.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 12.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 12.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 12.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 12.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 12.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 12.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 12.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 12.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 12.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 12.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 12.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 12.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 12.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 11.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 11.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 11.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 11.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 11.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 11.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 11.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 11.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 11.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 11.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 11.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 11.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 10.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 10.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 10.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 10.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 10.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 9.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 9.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 9.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 9.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 9.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 9.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 9.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 8.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 8.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 8.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 8.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 7.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 7.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 7.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 7.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 7.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 6.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 6.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 6.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 5.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 5.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 3.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 2.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 51.1
Samples: 246

Max nTPM: 116.6
Min nTPM: 1.0
Std nTPM: 28.4
Median nTPM: 53.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 116.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 113.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 112.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 111.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 110.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 110.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 108.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 106.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 104.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 104.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 102.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 100.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 95.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 95.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 95.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 94.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 92.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 90.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 90.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 89.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 89.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 89.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 89.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 88.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 88.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 88.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 87.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 87.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 86.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 85.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 84.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 84.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 84.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 83.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 83.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 82.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 82.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 82.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 82.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 81.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 81.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 81.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 80.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 80.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 80.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 79.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 78.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 78.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 78.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 77.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 77.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 76.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 76.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 76.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 76.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 75.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 74.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 74.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 74.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 73.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 73.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 72.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 72.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 71.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 70.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 70.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 69.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 69.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 69.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 68.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 68.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 68.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 67.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 67.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 66.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 66.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 65.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 65.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 65.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 65.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 65.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 65.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 64.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 64.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 63.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 63.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 63.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 63.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 61.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 61.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 61.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 60.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 60.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 59.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 59.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 59.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 59.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 59.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 59.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 59.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 59.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 58.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 58.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 57.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 56.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 56.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 56.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 56.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 56.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 56.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 55.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 55.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 55.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 54.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 54.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 54.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 54.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 53.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 52.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 51.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 51.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 51.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 49.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 49.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 49.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 49.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 48.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 48.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 48.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 48.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 47.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 47.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 46.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 46.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 46.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 45.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 45.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 43.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 43.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 42.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 42.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 42.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 42.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 42.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 41.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 41.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 41.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 40.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 39.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 37.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 37.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 36.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 36.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 36.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 36.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 36.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 35.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 34.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 34.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 33.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 33.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 33.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 32.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 32.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 31.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 31.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 30.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 30.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 30.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 30.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 30.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 29.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 29.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 27.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 26.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 26.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 25.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 25.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 25.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 25.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 25.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 24.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 23.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 23.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 22.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 22.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 21.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 21.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 21.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 21.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 21.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 20.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 19.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 18.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 18.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 17.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 16.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 16.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 15.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 15.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 15.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 15.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 15.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 15.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 15.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 15.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 14.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 14.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 14.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 13.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 12.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 12.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 12.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 11.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 11.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 10.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 10.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 10.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 8.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 8.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 8.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 8.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 7.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 6.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 5.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 5.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 5.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 4.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1.0
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Brain - Putamen (basal ganglia)
Average nTPM: 13.9
Samples: 205

Max nTPM: 71.7
Min nTPM: 2.6
Std nTPM: 10.3
Median nTPM: 10.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 71.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 60.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 54.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 53.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 48.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 46.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 44.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 36.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 33.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 33.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 30.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 30.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 29.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 28.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 28.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 28.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 27.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 26.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 24.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 24.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 24.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 23.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 23.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 23.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 22.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 20.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 20.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 20.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 20.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 19.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 19.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 19.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 19.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 19.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 19.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 18.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 18.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 18.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 17.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 17.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 17.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 17.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 17.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 17.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 17.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 17.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 17.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 16.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 16.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 16.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 15.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 15.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 15.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 15.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 15.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 15.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 15.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 15.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 15.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 15.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 15.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 15.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 14.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 14.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 14.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 13.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 13.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 13.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 13.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 13.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 13.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 13.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 13.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 13.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 13.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 12.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 12.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 12.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 12.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 12.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 12.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 12.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 12.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 12.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 11.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 11.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 11.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 11.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 11.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 11.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 11.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 11.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 11.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 10.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 10.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 10.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 10.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 10.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 10.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 10.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 10.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 10.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 10.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 10.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 10.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 9.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 9.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 9.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 9.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 9.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 9.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 9.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 9.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 8.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 8.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 8.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 8.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 8.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 8.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 8.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 8.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 7.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 7.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 7.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 7.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 7.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 7.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 7.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 7.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 7.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 7.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 7.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 7.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 6.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 6.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 6.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 6.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 6.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 6.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 6.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 6.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 6.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 6.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 5.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 5.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 5.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 5.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 5.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 5.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 5.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 5.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 5.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 4.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 4.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 4.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 4.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 4.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 4.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 4.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 3.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 3.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 3.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 3.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 2.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 0.0
FF:10164-103B2 76 years, female 0.0
Nucleus accumbens
Scaled Tags Per Million: 0.0
FF:10037-101F1 23-56 years, mixed 0.0
Putamen
Scaled Tags Per Million: 0.0
FF:10176-103C5 60 years, female 0.0
Globus pallidus
Scaled Tags Per Million: 0.0
FF:10175-103C4 60 years, female 0.0
FF:10161-103A8 76 years, female 0.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.5
Pig sample Sample description nTPM
Caudate
nTPM: 13.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.0
Sample A Female 14.4
Sample B Female 15.2
Sample C Male 12.0
Sample D Male 12.4
Putamen
nTPM: 7.7
Samples: 4

Max nTPM: 7.9
Min nTPM: 7.1
Sample A Female 7.7
Sample B Female 7.9
Sample C Male 7.1
Sample D Male 7.9
Septum
nTPM: 12.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 10.0
Sample A Female 19.6
Sample B Female 11.1
Sample C Male 10.4
Sample D Male 10.0
Ventral pallidum
nTPM: 11.9
Samples: 4

Max nTPM: 20.1
Min nTPM: 7.0
Sample A Female 20.1
Sample B Female 7.4
Sample C Male 7.0
Sample D Male 12.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 6.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 6.5
Sample A Male 6.8
Sample B Male 6.5
Sample C Female 7.1
Sample D Female 7.1
Septum
nTPM: 9.8
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.6
Sample A Male 8.6
Sample B Male 10.0
Sample C Female 9.9
Sample D Female 10.7
Ventral forebrain
nTPM: 5.8
Samples: 4

Max nTPM: 6.7
Min nTPM: 4.7
Sample A Male 6.1
Sample B Male 5.8
Sample C Female 4.7
Sample D Female 6.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
68744486 Antisense, RP_050208_01_A05, Mouse strain C57BL/6J (56 days, male) 2.1
71063818 Antisense, RP_050725_03_C05, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 1.3
68744486 Antisense, RP_050208_01_A05, Mouse strain C57BL/6J (56 days, male) 2.3
71063818 Antisense, RP_050725_03_C05, Mouse strain C57BL/6J (56 days, male) 0.4

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