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CCDC66
HPA
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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CCDC66
Synonyms DKFZp686C0433
Gene descriptioni

Full gene name according to HGNC.

Coiled-coil domain containing 66
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband p14.3
Chromosome location (bp) 56557161 - 56621837
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000180376 (version 109)
Entrez gene 285331
HGNC HGNC:27709
UniProt A2RUB6 (UniProt - Evidence at protein level)
neXtProt NX_A2RUB6
GeneCards CCDC66
Antibodypedia CCDC66 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Microtubule-binding protein required for ciliogenesis 1. May function in ciliogenesis by mediating the transport of proteins like BBS4 to the cilium, but also through the organization of the centriolar satellites 2. Plays a role in retina morphogenesis and/or homeostasis (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cilium biogenesis/degradation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables microtubule binding activity. Involved in cilium assembly; microtubule bundle formation; and regulation of protein localization to cilium. Located in several cellular components, including Flemming body; microtubule cytoskeleton; and photoreceptor inner segment. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CCDC66-201
ENSP00000326050
ENST00000326595
A2RUB6
[Direct mapping] Coiled-coil domain-containing protein 66
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0001578 [microtubule bundle formation]
GO:0001750 [photoreceptor outer segment]
GO:0001895 [retina homeostasis]
GO:0001917 [photoreceptor inner segment]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005929 [cilium]
GO:0008017 [microtubule binding]
GO:0030030 [cell projection organization]
GO:0030054 [cell junction]
GO:0034451 [centriolar satellite]
GO:0036064 [ciliary basal body]
GO:0042803 [protein homodimerization activity]
GO:0042995 [cell projection]
GO:0060271 [cilium assembly]
GO:0090543 [Flemming body]
GO:1903564 [regulation of protein localization to cilium]
Show all
914 aa
105.6 kDa
No 0
CCDC66-203
ENSP00000378167
ENST00000394672
A2RUB6
[Direct mapping] Coiled-coil domain-containing protein 66
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0001578 [microtubule bundle formation]
GO:0001750 [photoreceptor outer segment]
GO:0001895 [retina homeostasis]
GO:0001917 [photoreceptor inner segment]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005929 [cilium]
GO:0008017 [microtubule binding]
GO:0030030 [cell projection organization]
GO:0030054 [cell junction]
GO:0034451 [centriolar satellite]
GO:0036064 [ciliary basal body]
GO:0042803 [protein homodimerization activity]
GO:0042995 [cell projection]
GO:0050908 [detection of light stimulus involved in visual perception]
GO:0060271 [cilium assembly]
GO:0090543 [Flemming body]
GO:1903564 [regulation of protein localization to cilium]
Show all
948 aa
109.4 kDa
No 0
CCDC66-204
ENSP00000401451
ENST00000422222
C9JYB8
[Direct mapping] Coiled-coil domain-containing protein 66
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005813 [centrosome]
GO:0005829 [cytosol]
GO:0008017 [microtubule binding]
GO:0030054 [cell junction]
GO:0034451 [centriolar satellite]
GO:0090543 [Flemming body]
Show all
633 aa
72.4 kDa
No 0

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