We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Medium
Neuronal projections:
Not detected
Synapses:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
23.8
nTPM
HPA Brain:
49.0
nTPM
GTEx:
23.8
nTPM
FANTOM5:
52.0
Scaled Tags Per Million
Pig:
61.3
nTPM
Mouse:
46.3
nTPM
Allen mouse:
12.9
Expression energy
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA064128
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Not detected
Synapses
Not detected
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA064872
Glial cells
Not detected
Neuronal cells
Low
Neuronal projections
Not detected
Synapses
Not detected
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA067500
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Not detected
Synapses
Not detected
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA064128
Antibody HPA064872
Antibody HPA067500
Glial cells
Not detected
Not detected
Low
Neuronal cells
Low
Low
Low
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.0
Sample id
Sample description
nTPM
Hippocampus nTPM: 34.1
2148
Female, age 91, left hemisphere
54.3
2621
Female, age 67, right hemisphere
47.6
1911
Female, age 85, right hemisphere
40.9
1898
Male, age 80, left hemisphere
24.1
1855
Male, age 76, left hemisphere
20.2
2529
Female, age 94, left hemisphere
17.8
Dentate gyrus nTPM: 33.5
1927
Female, age 91, both hemispheres
70.1
2531
Female, age 67, both hemispheres
32.6
2010
Male, age 76, both hemispheres
27.1
2246
Female, age 85, both hemispheres
25.5
2528
Male, age 74, both hemispheres
23.1
2530
Female, age 94, left hemisphere
22.6
Entorhinal gyrus nTPM: 5.7
2117
Female, age 91, right hemisphere
17.3
1938
Female, age 85, left hemisphere
7.1
2686
Male, age 75, right hemisphere
5.4
2764
Male, age 80, right hemisphere
2.5
1787
Male, age 76, left hemisphere
1.4
2613
Female, age 94, left hemisphere
0.7
Hippocampus, CA1 nTPM: 49.0
2749
Male, age 80, left hemisphere
99.1
2527
Male, age 74, both hemispheres
46.8
2045
Male, age 76, both hemispheres
39.5
1873
Female, age 85, both hemispheres
35.6
2082
Female, age 91, right hemisphere
24.2
Hippocampus, CA2 nTPM: 26.3
1963
Male, age 80, left hemisphere
51.3
2249
Male, age 74, both hemispheres
36.1
1892
Male, age 76, both hemispheres
26.3
2113
Female, age 91, right hemisphere
24.9
2437
Female, age 94, left hemisphere
10.3
1940
Female, age 85, left hemisphere
9.1
Hippocampus, CA3 nTPM: 38.2
2137
Male, age 80, left hemisphere
89.6
2861
Female, age 67, both hemispheres
40.3
2436
Male, age 74, both hemispheres
31.1
1867
Male, age 76, both hemispheres
26.5
2620
Female, age 94, left hemisphere
25.7
1891
Female, age 85, both hemispheres
16.0
Parahippocampal cortex nTPM: 8.5
2245
Female, age 91, both hemispheres
37.4
2250
Female, age 67, right hemisphere
11.5
2693
Female, age 94, both hemispheres
9.2
2018
Male, age 76, both hemispheres
8.7
1933
Female, age 85, both hemispheres
7.3
1850
Male, age 80, both hemispheres
3.5
2532
Female, age 72, left hemisphere
2.8
2622
Female, age 67, right hemisphere
2.5
1990
Female, age 91, right hemisphere
1.6
2692
Male, age 74, both hemispheres
1.0
Perirhinal gyrus nTPM: 7.3
2848
Male, age 76, right hemisphere
11.4
1794
Male, age 80, right hemisphere
7.5
2521
Female, age 94, right hemisphere
7.3
1841
Female, age 85, right hemisphere
6.2
1847
Female, age 91, left hemisphere
4.2
Subiculum nTPM: 15.3
1901
Male, age 80, both hemispheres
30.0
2042
Male, age 76, both hemispheres
26.8
2729
Female, age 91, right hemisphere
16.4
1977
Female, age 85, both hemispheres
11.4
2619
Male, age 74, both hemispheres
4.3
2438
Female, age 94, left hemisphere
2.8
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
23.8
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 23.8
Samples: 197
Max nTPM: 135.4
Min nTPM: 0.7
Std nTPM: 21.6
Median nTPM: 16.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
135.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
88.8
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
81.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
73.8
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
73.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
69.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
69.2
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
68.8
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
67.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
67.3
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
66.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
66.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
63.2
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
62.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
61.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
58.0
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
57.6
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
56.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
56.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
54.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
52.7
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
52.2
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
52.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
50.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
50.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
49.5
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
47.4
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
46.6
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
46.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
45.9
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
45.6
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
45.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
45.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
45.0
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
44.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
44.1
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
44.1
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
44.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
43.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
42.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
41.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
41.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
40.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
40.0
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
38.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
37.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
37.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
36.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
36.2
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
36.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
35.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
35.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
34.2
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
34.2
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
33.5
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
33.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
32.9
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
32.8
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
32.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
32.3
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
31.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
31.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
30.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
30.5
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
29.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
29.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
28.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
28.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
27.5
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
26.4
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
26.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
25.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
24.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
24.6
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
24.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
23.8
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
23.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
23.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
23.3
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
23.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
23.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
22.9
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
22.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
22.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
22.2
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
22.0
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
22.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
21.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
21.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
20.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
20.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
20.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
19.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
19.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
19.1
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
18.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
17.7
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
17.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
16.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
16.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
16.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
16.4
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
16.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
15.6
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
15.6
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
15.1
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
14.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
13.9
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
13.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
13.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
12.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
11.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
11.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
11.7
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
11.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
11.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
11.3
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
10.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
10.7
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
10.3
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
10.2
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
10.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
10.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
10.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
9.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
9.9
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
9.3
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
9.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
9.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
9.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
8.9
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
8.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
8.7
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
8.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
8.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
8.6
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
8.2
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
8.2
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
7.9
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
7.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
7.7
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
7.7
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
7.4
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
7.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
6.5
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
6.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
6.4
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
6.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
6.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
6.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
6.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
6.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
5.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
5.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
5.3
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
5.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
5.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
5.0
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
5.0
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
5.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
4.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
4.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
4.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
4.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
4.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
4.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
4.4
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
4.4
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
4.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
4.2
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
4.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
3.9
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
3.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
3.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
3.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
3.7
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
3.3
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
3.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
3.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
3.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
2.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
2.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
2.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
2.6
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
2.6
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
2.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
2.4
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
2.1
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
2.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
1.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
1.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
1.6
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
1.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
0.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
0.7
Show allShow less
HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
46.3
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 30.1
Samples: 4
Max nTPM: 33.8
Min nTPM: 25.7
Sample A
Male
27.8
Sample B
Male
25.7
Sample C
Female
33.1
Sample D
Female
33.8
Hippocampal formation nTPM: 46.3
Samples: 4
Max nTPM: 54.2
Min nTPM: 37.2
Sample A
Male
43.1
Sample B
Male
54.2
Sample C
Female
50.8
Sample D
Female
37.2
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
