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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Medium
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Medium
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Medium
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:69.2 nTPM
HPA Brain:85.6 nTPM
GTEx:69.2 nTPM
FANTOM5:157.0 Scaled Tags Per Million
Pig:44.7 nTPM
Mouse:145.4 nTPM
Allen mouse:2.3 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045209
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Medium
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane High
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Medium
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Medium
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 41.5
2003 Female, age 85, right hemisphere 61.3
1768 Female, age 72, unknown 52.3
2101 Male, age 74, right hemisphere 47.9
2006 Male, age 61, right hemisphere 41.6
2055 Female, age 91, right hemisphere 36.6
1788 Male, age 55, unknown 34.4
1769 Male, age 76, right hemisphere 33.9
1774 Male, age 80, left hemisphere 24.1
Cerebellar nuclei
nTPM: 85.6
2783 Female, age 72, unknown 138.3
2882 Male, age 76, left hemisphere 86.7
2175 Male, age 61, right hemisphere 84.9
1871 Male, age 74, unknown 82.3
2005 Male, age 80, left hemisphere 80.7
1966 Female, age 91, left hemisphere 80.2
2177 Female, age 85, both hemispheres 73.9
1879 Male, age 55, unknown 72.9
2318 Male, age 74, left hemisphere 70.7
Flocculonodular lobe
nTPM: 31.8
1792 Male, age 74, unknown 41.3
2004 Male, age 61, right hemisphere 37.2
1765 Male, age 55, unknown 35.0
2176 Female, age 91, right hemisphere 29.5
1767 Male, age 76, left hemisphere 28.6
1835 Female, age 85, right hemisphere 27.6
1771 Male, age 80, left hemisphere 23.2
Vermis
nTPM: 35.3
1766 Male, age 55, unknown 47.9
1928 Female, age 72, unknown 45.7
1751 Male, age 74, right hemisphere 40.0
2834 Male, age 80, left hemisphere 34.1
1770 Male, age 76, left hemisphere 33.2
2460 Male, age 61, both hemispheres 31.3
1825 Male, age 74, unknown 30.3
1778 Female, age 91, left hemisphere 28.4
1988 Female, age 85, left hemisphere 27.3

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 69.2
Samples: 215

Max nTPM: 155.0
Min nTPM: 37.4
Std nTPM: 16.7
Median nTPM: 66.0
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 155.0
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 120.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 118.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 112.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 109.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 105.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 105.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 103.9
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 103.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 103.4
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 103.3
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 103.3
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 101.5
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 100.1
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 99.6
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 98.6
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 95.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 95.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 94.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 93.0
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 92.7
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 91.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 90.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 90.6
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 90.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 87.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 87.3
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 87.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 87.1
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 85.5
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 85.4
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 84.6
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 83.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 83.5
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 83.3
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 82.6
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 82.4
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 82.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 82.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 81.6
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 81.5
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 81.4
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 80.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 80.7
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 79.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 79.7
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 79.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 78.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 78.6
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 78.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 77.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 77.4
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 76.9
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 76.7
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 76.7
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 76.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 76.5
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 75.7
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 74.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 74.7
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 74.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 74.7
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 74.5
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 74.4
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 74.4
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 74.3
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 74.2
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 74.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 73.4
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 73.2
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 73.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 73.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 72.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 72.5
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 72.4
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 72.3
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 72.1
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 71.9
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 71.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 71.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 71.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 71.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 71.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 71.2
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 71.0
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 70.8
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 70.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 70.2
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 70.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 70.0
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 70.0
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 69.9
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 69.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 68.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 68.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 68.2
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 68.1
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 67.8
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 67.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 67.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 67.2
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 66.9
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 66.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 66.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 66.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 66.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 66.1
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 66.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 65.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 65.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 65.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 64.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 64.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 64.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 64.6
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 64.4
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 64.4
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 64.2
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 64.2
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 64.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 64.1
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 63.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 63.6
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 63.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 63.5
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 63.4
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 63.4
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 63.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 62.9
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 62.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 62.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 62.7
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 62.7
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 62.5
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 62.5
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 62.4
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 62.0
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 62.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 61.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 61.7
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 61.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 61.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 61.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 61.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 61.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 61.0
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 61.0
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 60.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 60.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 60.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 60.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 60.6
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 60.4
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 60.2
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 60.2
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 60.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 59.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 59.9
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 59.6
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 59.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 59.5
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 59.4
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 59.4
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 59.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 59.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 58.9
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 58.8
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 58.8
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 58.7
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 58.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 58.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 57.9
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 57.8
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 57.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 57.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 57.2
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 56.7
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 56.4
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 56.1
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 55.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 54.6
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 54.4
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 54.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 53.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 53.1
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 53.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 53.0
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 52.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 51.8
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 51.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 51.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 51.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 50.0
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 49.9
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 49.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 49.2
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 49.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 49.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 49.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 49.1
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 48.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 47.9
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 47.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 46.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 46.3
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 45.0
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 43.9
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 43.7
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 42.9
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 42.0
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 41.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 40.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 38.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 38.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 37.4
Show allShow less
Brain - Cerebellum
Average nTPM: 62.1
Samples: 241

Max nTPM: 126.4
Min nTPM: 31.6
Std nTPM: 11.9
Median nTPM: 62.4
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 126.4
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 105.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 94.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 92.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 87.1
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 85.3
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 85.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 84.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 84.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 83.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 82.6
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 82.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 82.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 81.4
GTEX-11EI6-2926-SM-5985U 60-69 years, male 79.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 78.8
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 77.9
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 77.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 76.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 76.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 76.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 76.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 75.3
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 75.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 75.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 74.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 74.8
GTEX-11ONC-3026-SM-5985W 60-69 years, male 74.6
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 74.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 73.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 73.5
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 73.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 73.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 72.0
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 71.9
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 71.8
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 71.7
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 71.5
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 71.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 71.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 71.0
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 71.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 70.8
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 70.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 70.7
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 70.5
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 70.4
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 70.4
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 70.1
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 70.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 70.1
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 70.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 69.8
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 69.7
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 69.4
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 69.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 69.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 68.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 68.8
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 68.8
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 68.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 68.7
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 68.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 68.4
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 68.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 68.0
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 68.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 67.9
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 67.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 67.6
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 67.2
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 67.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 67.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 66.9
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 66.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 66.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 66.7
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 66.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 66.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 66.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 66.4
GTEX-13112-2926-SM-5DUWT 50-59 years, male 66.3
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 66.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 66.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 66.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 66.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 66.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 65.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 65.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 65.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 65.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 65.5
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 65.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 65.4
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 65.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 65.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 65.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 64.8
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 64.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 64.6
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 64.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 64.3
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 64.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 63.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 63.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 63.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 63.8
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 63.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 63.3
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 63.3
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 63.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 63.2
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 63.2
GTEX-1192X-3226-SM-5987D 50-59 years, male 63.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 62.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 62.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 62.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 62.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 62.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 62.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 62.4
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 62.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 62.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 62.2
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 61.7
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 61.6
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 61.6
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 61.5
GTEX-14E6D-2926-SM-664OP 50-59 years, male 61.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 61.2
GTEX-11NUK-3026-SM-5986K 50-59 years, male 61.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 61.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 60.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 60.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 60.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 60.6
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 60.4
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 60.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 60.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 60.2
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 60.1
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 59.7
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 59.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 59.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 59.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 59.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 59.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 59.0
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 59.0
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 58.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 58.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 58.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 58.6
GTEX-12126-0926-SM-5FQTW 20-29 years, male 58.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 58.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 58.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 57.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 57.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 57.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 57.6
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 57.3
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 57.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 57.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 57.1
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 57.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 56.9
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 56.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 56.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 56.2
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 56.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 56.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 55.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 55.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 55.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 55.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 55.5
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 55.4
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 55.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 55.0
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 54.3
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 54.3
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 54.3
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 54.2
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 53.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 53.8
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 53.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 53.6
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 53.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 53.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 53.1
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 52.9
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 52.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 52.7
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 52.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 52.6
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 52.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 52.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 52.0
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 52.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 51.9
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 51.9
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 51.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 51.8
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 51.3
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 51.1
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 51.0
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 50.5
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 50.4
GTEX-18465-2926-SM-7KFSE 50-59 years, male 50.4
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 49.8
GTEX-17EVP-2926-SM-793BU 40-49 years, male 49.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 49.2
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 49.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 48.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 48.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 48.2
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 48.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 47.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 46.7
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 46.6
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 46.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 46.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 45.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 45.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 44.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 44.3
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 43.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 43.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 43.0
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 42.9
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 42.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 42.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 41.4
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 40.0
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 39.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 39.3
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 37.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 37.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 36.4
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 32.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 31.6
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

157.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 157.0
FF:10083-102B2 22-68 years, mixed 262.4
FF:10166-103B4 76 years, female 51.7

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.7
Pig sample Sample description nTPM
Cerebellum
nTPM: 44.8
Samples: 4

Max nTPM: 69.9
Min nTPM: 33.7
Sample A Female 69.9
Sample B Female 38.5
Sample C Male 33.7
Sample D Male 36.9

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.4
Mouse sample Sample description nTPM
Cerebellum
nTPM: 145.4
Samples: 4

Max nTPM: 153.5
Min nTPM: 135.1
Sample A Male 148.5
Sample B Male 153.5
Sample C Female 144.6
Sample D Female 135.1

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 2.3
69885768 Antisense, RP_050512_03_D07, Mouse strain C57BL/6J (56 days, male) 2.3

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