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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:738.6 nTPM
HPA Brain:337.0 nTPM
GTEx:738.6 nTPM
FANTOM5:1198.3 Scaled Tags Per Million
Pig:1199.3 nTPM
Mouse:3628.7 nTPM
Allen mouse:20.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013138Antibody CAB016390
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

337.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 295.1
2290 Female, age 72, unknown 499.8
2289 Male, age 61, right hemisphere 330.2
2288 Male, age 75, left hemisphere 304.9
1857 Female, age 85, left hemisphere 290.2
1854 Male, age 80, left hemisphere 268.5
2846 Female, age 79, unknown 250.1
1781 Male, age 74, unknown 214.9
2481 Female, age 94, left hemisphere 202.4
Globus pallidus, externus
nTPM: 16.1
2646 Male, age 61, right hemisphere 32.5
2395 Male, age 75, both hemispheres 24.3
2772 Female, age 79, unknown 9.0
2567 Female, age 72, unknown 8.6
1996 Male, age 80, right hemisphere 6.3
Globus pallidus, internus
nTPM: 15.5
2483 Female, age 94, right hemisphere 87.3
2566 Female, age 72, unknown 8.4
2111 Female, age 85, right hemisphere 4.8
2037 Male, age 80, right hemisphere 2.6
2287 Male, age 75, right hemisphere 2.6
1818 Male, age 74, unknown 2.4
2778 Female, age 91, both hemispheres 0.6
Nucleus accumbens
nTPM: 337.0
1856 Female, age 91, right hemisphere 546.4
2824 Male, age 61, right hemisphere 523.9
2698 Female, age 72, unknown 464.6
1783 Male, age 74, unknown 464.5
1806 Female, age 85, left hemisphere 277.1
2286 Male, age 75, left hemisphere 177.9
2391 Female, age 94, left hemisphere 126.3
2732 Male, age 80, right hemisphere 115.4
Nucleus basalis of Meynert
nTPM: 258.6
2484 Female, age 94, left hemisphere 550.7
2393 Male, age 80, right hemisphere 243.8
2821 Male, age 75, both hemispheres 196.8
2569 Male, age 61, both hemispheres 43.1
Nucleus of the diagonal band
nTPM: 10.8
1979 Male, age 74, unknown 27.0
1812 Female, age 91, both hemispheres 22.4
2029 Male, age 61, right hemisphere 2.1
2775 Male, age 80, right hemisphere 1.6
2195 Female, age 85, both hemispheres 1.2
Putamen
nTPM: 308.0
1829 Male, age 74, unknown 424.7
1838 Male, age 80, right hemisphere 399.0
1937 Female, age 91, right hemisphere 388.1
2489 Female, age 72, unknown 308.8
2466 Female, age 79, unknown 301.6
2482 Female, age 94, left hemisphere 240.6
2647 Male, age 75, left hemisphere 93.4
Septal nuclei
nTPM: 11.3
2394 Male, age 61, left hemisphere 33.2
2009 Female, age 91, both hemispheres 18.0
2059 Female, age 85, both hemispheres 9.0
2199 Male, age 80, right hemisphere 6.5
2031 Female, age 72, unknown 4.5
2629 Female, age 94, right hemisphere 4.5
1960 Male, age 74, unknown 3.0
Stria terminalis, bed nucleus
nTPM: 45.1
2486 Female, age 94, both hemispheres 103.8
2201 Male, age 74, unknown 27.9
1974 Female, age 91, both hemispheres 3.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

738.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 441.0
Samples: 246

Max nTPM: 1985.2
Min nTPM: 0.3
Std nTPM: 435.6
Median nTPM: 299.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1985.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1967.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1960.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1846.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1829.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1645.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1593.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1440.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1424.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1327.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1251.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1244.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1238.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1221.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1184.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1170.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1167.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1156.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1146.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1146.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1142.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1131.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1076.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1069.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1059.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1049.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1041.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1035.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1032.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1028.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1012.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1007.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 999.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 995.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 977.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 955.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 947.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 939.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 928.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 924.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 915.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 913.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 894.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 837.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 832.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 830.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 821.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 813.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 813.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 788.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 787.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 786.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 762.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 750.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 746.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 723.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 721.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 714.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 713.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 701.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 689.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 685.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 682.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 654.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 644.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 640.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 639.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 639.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 632.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 625.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 609.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 608.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 591.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 582.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 562.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 547.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 545.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 537.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 535.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 530.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 527.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 515.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 505.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 505.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 487.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 479.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 477.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 473.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 470.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 466.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 463.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 459.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 456.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 447.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 442.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 441.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 434.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 425.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 425.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 419.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 415.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 413.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 407.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 406.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 399.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 397.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 395.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 394.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 394.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 366.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 362.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 358.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 357.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 354.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 353.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 350.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 346.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 345.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 327.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 326.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 320.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 319.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 303.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 294.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 289.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 288.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 275.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 274.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 273.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 271.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 269.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 269.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 264.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 262.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 246.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 246.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 235.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 230.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 217.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 213.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 207.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 206.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 202.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 201.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 200.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 196.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 194.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 193.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 192.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 192.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 191.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 189.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 186.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 185.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 179.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 179.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 172.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 170.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 168.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 163.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 162.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 159.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 154.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 152.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 151.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 149.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 140.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 136.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 133.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 131.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 124.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 118.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 115.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 111.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 110.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 105.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 104.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 104.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 103.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 99.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 96.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 96.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 88.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 85.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 83.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 82.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 79.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 79.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 71.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 66.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 64.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 62.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 61.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 60.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 56.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 53.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 53.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 49.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 47.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 47.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 45.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 43.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 43.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 37.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 35.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 32.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 32.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 31.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 30.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 29.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 26.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 22.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 21.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 18.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 18.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 16.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 16.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 15.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 15.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 15.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 13.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 10.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 10.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 8.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 7.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 4.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 3.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 0.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 738.6
Samples: 246

Max nTPM: 2448.8
Min nTPM: 3.2
Std nTPM: 581.2
Median nTPM: 647.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 2448.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2381.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 2243.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 2242.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 2162.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 2084.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 2079.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2067.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 2017.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1986.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1967.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1949.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1828.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1821.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1804.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1798.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1726.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1718.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1716.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1692.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1605.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1592.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1578.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1549.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1541.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1510.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1508.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1500.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1494.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1473.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1471.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1466.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1466.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1452.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1444.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1436.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1434.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1419.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1413.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1401.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1389.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1382.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1371.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1360.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1301.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1289.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1288.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1278.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1273.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1262.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1226.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1216.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1184.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1169.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 1165.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1147.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1128.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1127.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1126.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1121.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1104.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1097.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1082.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1072.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1067.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1058.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1052.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1042.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1025.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1012.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 988.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 984.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 981.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 946.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 945.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 943.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 932.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 927.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 922.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 921.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 921.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 912.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 900.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 897.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 894.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 891.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 883.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 881.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 879.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 879.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 878.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 877.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 856.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 851.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 842.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 840.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 839.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 832.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 819.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 811.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 804.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 800.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 797.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 797.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 792.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 792.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 791.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 788.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 756.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 747.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 746.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 737.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 725.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 713.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 704.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 701.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 695.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 693.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 687.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 687.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 685.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 656.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 652.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 642.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 642.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 626.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 621.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 619.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 612.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 611.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 610.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 607.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 580.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 568.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 555.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 553.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 550.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 548.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 547.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 545.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 542.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 535.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 533.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 531.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 529.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 529.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 524.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 515.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 504.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 504.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 500.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 486.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 478.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 473.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 471.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 459.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 449.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 443.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 434.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 428.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 421.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 420.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 410.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 393.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 372.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 365.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 358.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 348.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 346.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 337.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 331.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 330.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 319.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 310.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 306.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 294.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 261.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 261.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 252.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 240.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 238.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 235.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 232.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 227.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 216.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 201.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 193.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 193.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 191.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 191.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 186.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 183.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 180.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 172.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 169.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 169.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 168.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 147.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 145.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 143.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 134.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 131.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 120.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 114.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 113.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 110.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 108.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 89.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 89.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 88.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 87.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 85.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 83.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 79.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 78.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 76.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 75.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 67.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 60.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 51.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 48.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 48.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 47.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 47.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 43.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 36.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 34.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 32.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 31.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 30.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 28.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 26.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 26.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 22.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 19.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 16.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 16.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 15.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 15.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 15.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 14.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 13.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.2
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Brain - Putamen (basal ganglia)
Average nTPM: 485.4
Samples: 205

Max nTPM: 2626.9
Min nTPM: 3.2
Std nTPM: 482.8
Median nTPM: 345.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2626.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2173.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 2157.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1690.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 1681.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1606.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1530.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1516.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1509.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1446.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1427.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1404.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1363.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1341.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1320.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1314.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1302.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1227.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1220.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1190.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1157.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1145.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1136.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1115.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1109.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1102.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1081.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1070.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1043.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1040.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 984.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 976.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 965.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 952.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 924.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 920.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 918.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 910.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 899.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 886.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 869.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 869.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 865.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 864.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 836.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 831.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 804.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 794.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 793.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 781.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 771.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 759.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 743.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 734.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 733.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 672.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 672.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 672.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 654.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 645.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 638.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 634.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 611.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 600.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 592.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 591.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 584.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 577.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 563.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 563.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 556.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 552.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 547.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 535.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 531.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 509.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 494.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 492.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 473.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 468.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 464.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 457.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 452.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 450.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 449.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 436.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 432.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 412.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 405.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 400.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 393.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 385.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 384.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 382.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 381.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 378.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 370.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 358.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 358.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 348.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 348.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 347.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 345.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 335.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 321.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 314.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 307.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 305.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 305.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 303.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 300.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 298.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 296.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 289.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 281.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 274.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 265.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 258.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 252.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 243.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 242.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 241.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 236.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 234.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 232.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 224.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 219.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 216.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 216.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 215.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 211.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 210.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 205.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 201.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 200.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 184.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 177.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 163.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 156.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 153.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 144.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 142.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 138.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 136.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 134.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 109.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 107.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 104.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 102.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 96.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 95.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 94.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 93.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 92.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 86.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 85.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 81.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 79.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 74.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 73.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 73.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 70.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 64.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 62.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 60.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 58.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 55.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 50.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 47.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 46.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 43.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 43.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 39.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 38.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 37.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 37.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 35.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 33.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 28.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 27.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 26.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 26.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 24.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 22.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 21.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 20.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 18.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 16.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 15.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 14.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 13.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 12.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 11.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 10.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 8.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 4.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 4.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 3.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1198.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 770.7
FF:10164-103B2 76 years, female 770.7
Nucleus accumbens
Scaled Tags Per Million: 661.7
FF:10037-101F1 23-56 years, mixed 661.7
Putamen
Scaled Tags Per Million: 1198.3
FF:10176-103C5 60 years, female 1198.3
Globus pallidus
Scaled Tags Per Million: 164.3
FF:10175-103C4 60 years, female 290.3
FF:10161-103A8 76 years, female 38.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1199.3
Pig sample Sample description nTPM
Caudate
nTPM: 1199.3
Samples: 4

Max nTPM: 1781.4
Min nTPM: 835.3
Sample A Female 835.3
Sample B Female 1129.1
Sample C Male 1781.4
Sample D Male 1051.5
Putamen
nTPM: 1081.3
Samples: 4

Max nTPM: 1588.6
Min nTPM: 319.2
Sample A Female 319.2
Sample B Female 1147.4
Sample C Male 1588.6
Sample D Male 1269.9
Septum
nTPM: 230.9
Samples: 4

Max nTPM: 393.0
Min nTPM: 62.9
Sample A Female 393.0
Sample B Female 353.6
Sample C Male 114.2
Sample D Male 62.9
Ventral pallidum
nTPM: 471.1
Samples: 4

Max nTPM: 617.2
Min nTPM: 112.4
Sample A Female 569.5
Sample B Female 585.4
Sample C Male 112.4
Sample D Male 617.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3628.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3628.7
Samples: 4

Max nTPM: 4771.6
Min nTPM: 2549.7
Sample A Male 4085.3
Sample B Male 4771.6
Sample C Female 2549.7
Sample D Female 3108.2
Septum
nTPM: 367.3
Samples: 4

Max nTPM: 517.1
Min nTPM: 234.5
Sample A Male 517.1
Sample B Male 234.5
Sample C Female 265.8
Sample D Female 451.7
Ventral forebrain
nTPM: 2024.5
Samples: 4

Max nTPM: 2574.2
Min nTPM: 1620.0
Sample A Male 1982.7
Sample B Male 1921.1
Sample C Female 2574.2
Sample D Female 1620.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 20.4
74881286 Antisense, RP_060315_01_A07, Mouse strain C57BL/6J (56 days, male) 20.8
69116554 Antisense, RP_050317_02_G11, Mouse strain C57BL/6J (56 days, male) 19.9
Pallidum
Expression energy: 14.3
69116554 Antisense, RP_050317_02_G11, Mouse strain C57BL/6J (56 days, male) 20.1
74881286 Antisense, RP_060315_01_A07, Mouse strain C57BL/6J (56 days, male) 8.5

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