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CFAP65
HPA
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  • CFAP65
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CFAP65
Synonyms CCDC108, DKFZp434O0527, MGC35338
Gene descriptioni

Full gene name according to HGNC.

Cilia and flagella associated protein 65
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q35
Chromosome location (bp) 219002846 - 219041527
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000181378 (version 109)
Entrez gene 255101
HGNC HGNC:25325
UniProt Q6ZU64 (UniProt - Evidence at protein level)
neXtProt NX_Q6ZU64
GeneCards CFAP65
Antibodypedia CFAP65 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plays a role in flagellar formation and sperm motility.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cilium biogenesis/degradation
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene has putative coiled-coil domains and may be a transmembrane protein. The chicken ortholog of this gene is involved in the Rose-comb mutation, which is a large chromosome inversion, resulting in altered comb morphology and defects in sperm motility. [provided by RefSeq, Aug 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CFAP65-201
ENSP00000295729
ENST00000295729
Q6ZU64
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001669 [acrosomal vesicle]
GO:0002080 [acrosomal membrane]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007288 [sperm axoneme assembly]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0030317 [flagellated sperm motility]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0097225 [sperm midpiece]
Show all
164 aa
18.6 kDa
No 0
CFAP65-202
ENSP00000340776
ENST00000341552
Q6ZU64
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0001669 [acrosomal vesicle]
GO:0002080 [acrosomal membrane]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007288 [sperm axoneme assembly]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0030317 [flagellated sperm motility]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0097225 [sperm midpiece]
Show all
1925 aa
217.2 kDa
No 0
CFAP65-203
ENSP00000386945
ENST00000409865
Q6ZU64
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
   Phobius predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001669 [acrosomal vesicle]
GO:0002080 [acrosomal membrane]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007288 [sperm axoneme assembly]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0030317 [flagellated sperm motility]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0097225 [sperm midpiece]
Show all
784 aa
87.6 kDa
No 0
CFAP65-204
ENSP00000386258
ENST00000410037
Q6ZU64
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
   Phobius predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001669 [acrosomal vesicle]
GO:0002080 [acrosomal membrane]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007288 [sperm axoneme assembly]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0030317 [flagellated sperm motility]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0097225 [sperm midpiece]
Show all
730 aa
81.4 kDa
No 0
CFAP65-205
ENSP00000394019
ENST00000413871
H7C0B4
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
127 aa
13.8 kDa
Yes 0
CFAP65-206
ENSP00000396836
ENST00000436631
C9JIV0
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
117 aa
12.9 kDa
No 0
CFAP65-207
ENSP00000413377
ENST00000441968
Q49A14
[Direct mapping] CCDC108 protein; Cilia- and flagella-associated protein 65
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
271 aa
30.5 kDa
No 0
CFAP65-208
ENSP00000409117
ENST00000453220
Q6ZU64
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001669 [acrosomal vesicle]
GO:0002080 [acrosomal membrane]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007288 [sperm axoneme assembly]
GO:0016020 [membrane]
GO:0030030 [cell projection organization]
GO:0030317 [flagellated sperm motility]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0097225 [sperm midpiece]
Show all
1925 aa
217.2 kDa
No 0
CFAP65-209
ENSP00000393483
ENST00000457968
C9JVA0
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
   Phobius predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0016020 [membrane]
Show all
234 aa
26.1 kDa
No 0
CFAP65-210
ENSP00000413746
ENST00000458526
C9JLP9
[Direct mapping] Cilia- and flagella-associated protein 65
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
114 aa
12.5 kDa
No 0

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