HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:60.8 nTPM
HPA Brain:154.8 nTPM
GTEx:60.8 nTPM
FANTOM5:86.9 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:60.1 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009073
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 154.8
Sample id Sample description nTPM
Hippocampus
nTPM: 114.8
1911 Female, age 85, right hemisphere 141.5
2529 Female, age 94, left hemisphere 127.3
2621 Female, age 67, right hemisphere 118.7
2148 Female, age 91, left hemisphere 108.6
1898 Male, age 80, left hemisphere 105.0
1855 Male, age 76, left hemisphere 87.8
Dentate gyrus
nTPM: 121.5
2530 Female, age 94, left hemisphere 152.2
2010 Male, age 76, both hemispheres 131.7
2528 Male, age 74, both hemispheres 129.2
2246 Female, age 85, both hemispheres 109.1
2531 Female, age 67, both hemispheres 107.1
1927 Female, age 91, both hemispheres 99.8
Entorhinal gyrus
nTPM: 150.7
2764 Male, age 80, right hemisphere 198.3
2117 Female, age 91, right hemisphere 190.1
2613 Female, age 94, left hemisphere 153.5
1787 Male, age 76, left hemisphere 123.1
2686 Male, age 75, right hemisphere 121.1
1938 Female, age 85, left hemisphere 118.0
Hippocampus, CA1
nTPM: 102.0
2749 Male, age 80, left hemisphere 118.3
2527 Male, age 74, both hemispheres 116.3
2082 Female, age 91, right hemisphere 115.4
1873 Female, age 85, both hemispheres 101.0
2045 Male, age 76, both hemispheres 59.0
Hippocampus, CA2
nTPM: 124.7
1963 Male, age 80, left hemisphere 145.4
2249 Male, age 74, both hemispheres 134.5
2437 Female, age 94, left hemisphere 133.5
2113 Female, age 91, right hemisphere 126.6
1940 Female, age 85, left hemisphere 123.4
1892 Male, age 76, both hemispheres 84.8
Hippocampus, CA3
nTPM: 117.0
2620 Female, age 94, left hemisphere 189.7
1891 Female, age 85, both hemispheres 154.7
1867 Male, age 76, both hemispheres 111.6
2137 Male, age 80, left hemisphere 90.4
2861 Female, age 67, both hemispheres 79.3
2436 Male, age 74, both hemispheres 76.0
Parahippocampal cortex
nTPM: 122.7
2692 Male, age 74, both hemispheres 166.0
1990 Female, age 91, right hemisphere 161.7
2532 Female, age 72, left hemisphere 151.0
2245 Female, age 91, both hemispheres 120.1
2693 Female, age 94, both hemispheres 118.4
1850 Male, age 80, both hemispheres 117.5
1933 Female, age 85, both hemispheres 111.5
2018 Male, age 76, both hemispheres 103.5
2622 Female, age 67, right hemisphere 100.2
2250 Female, age 67, right hemisphere 77.0
Perirhinal gyrus
nTPM: 95.3
1794 Male, age 80, right hemisphere 110.4
2521 Female, age 94, right hemisphere 105.6
1847 Female, age 91, left hemisphere 93.3
2848 Male, age 76, right hemisphere 87.8
1841 Female, age 85, right hemisphere 79.2
Subiculum
nTPM: 154.8
2042 Male, age 76, both hemispheres 203.2
1901 Male, age 80, both hemispheres 184.2
1977 Female, age 85, both hemispheres 155.6
2619 Male, age 74, both hemispheres 148.5
2438 Female, age 94, left hemisphere 120.3
2729 Female, age 91, right hemisphere 117.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 60.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.8
Samples: 197

Max nTPM: 261.2
Min nTPM: 7.4
Std nTPM: 38.4
Median nTPM: 50.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 261.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 237.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 185.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 157.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 153.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 153.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 152.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 151.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 149.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 143.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 143.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 86.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.9
FF:10153-102I9 76 years, female 97.1
FF:10169-103B7 60 years, female 76.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 26.1
Pig sample Sample description nTPM
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 27.7
Min nTPM: 13.4
Sample A Female 27.7
Sample B Female 18.2
Sample C Male 16.3
Sample D Male 13.4
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 38.2
Min nTPM: 11.8
Sample A Female 38.2
Sample B Female 24.8
Sample C Male 29.7
Sample D Male 11.8
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 17.4
Sample C Male 19.4
Sample D Male 14.8
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 27.2
Min nTPM: 14.4
Sample A Female 25.8
Sample B Female 14.4
Sample C Male 27.2
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 60.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.6
Samples: 4

Max nTPM: 60.2
Min nTPM: 42.0
Sample A Male 60.2
Sample B Male 53.1
Sample C Female 46.9
Sample D Female 42.0
Hippocampal formation
nTPM: 60.1
Samples: 4

Max nTPM: 68.8
Min nTPM: 46.9
Sample A Male 46.9
Sample B Male 58.6
Sample C Female 66.2
Sample D Female 68.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
71213880 Antisense, RP_050816_04_H10, Mouse strain C57BL/6J (56 days, male) 8.2

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