COLON - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:168.3 nTPM
HPA:18.7 nTPM
GTEx:168.3 nTPM
FANTOM5:43.6 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPMi 18.7
overview
Male, age 54
Colon sample 67
nTPM: 7.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 6.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 2.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 6.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 7.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 63.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 3.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 4.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 57.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 6.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 16.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 40.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 21
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 168.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 168.3
Samples: 373

Max nTPM: 417.7
Min nTPM: 3.4
Std nTPM: 75.3
Median nTPM: 163.3
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 417.7
GTEX-1LBAC-1726-SM-D3L9W 20-29 years, male 404.5
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 382.2
GTEX-1R9K5-2226-SM-DTX9G 50-59 years, male 368.8
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 354.8
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 353.4
GTEX-1PIGE-1526-SM-DTXFC 20-29 years, male 331.6
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 321.0
GTEX-17HGU-2626-SM-79OKN 50-59 years, male 316.5
GTEX-1C4CL-1626-SM-7DUF3 30-39 years, male 313.1
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 312.8
Show allShow less
Colon - Transverse
Average nTPM: 82.9
Samples: 406

Max nTPM: 417.6
Min nTPM: 0.3
Std nTPM: 82.4
Median nTPM: 61.6
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 417.6
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 417.5
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 364.3
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 350.3
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 331.1
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 316.9
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 315.6
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 314.9
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 298.7
GTEX-1C64O-2326-SM-73KU8 60-69 years, male 281.9
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 281.5
Show allShow less

COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 43.6
FF:10014-101C5 62,83,84 years, mixed 43.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org