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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:52.5 nTPM
HPA Brain:113.3 nTPM
GTEx:52.5 nTPM
FANTOM5:121.3 Scaled Tags Per Million
Mouse:97.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012956Antibody HPA077702
Glial cells LowLow
Neuronal cells LowMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 55.3
1781 Male, age 74, unknown 67.7
2846 Female, age 79, unknown 58.3
1857 Female, age 85, left hemisphere 58.1
2290 Female, age 72, unknown 57.8
2288 Male, age 75, left hemisphere 57.6
1854 Male, age 80, left hemisphere 50.5
2481 Female, age 94, left hemisphere 50.2
2289 Male, age 61, right hemisphere 41.9
Globus pallidus, externus
nTPM: 27.6
2395 Male, age 75, both hemispheres 36.7
2772 Female, age 79, unknown 36.4
2646 Male, age 61, right hemisphere 23.7
1996 Male, age 80, right hemisphere 22.2
2567 Female, age 72, unknown 19.1
Globus pallidus, internus
nTPM: 31.1
2483 Female, age 94, right hemisphere 43.5
2287 Male, age 75, right hemisphere 40.4
1818 Male, age 74, unknown 34.7
2778 Female, age 91, both hemispheres 28.7
2566 Female, age 72, unknown 26.9
2037 Male, age 80, right hemisphere 22.8
2111 Female, age 85, right hemisphere 20.8
Nucleus accumbens
nTPM: 65.5
1856 Female, age 91, right hemisphere 104.0
1783 Male, age 74, unknown 70.6
2824 Male, age 61, right hemisphere 70.6
1806 Female, age 85, left hemisphere 63.7
2698 Female, age 72, unknown 58.6
2286 Male, age 75, left hemisphere 55.6
2732 Male, age 80, right hemisphere 54.0
2391 Female, age 94, left hemisphere 47.2
Nucleus basalis of Meynert
nTPM: 42.5
2484 Female, age 94, left hemisphere 53.1
2821 Male, age 75, both hemispheres 50.1
2393 Male, age 80, right hemisphere 46.3
2569 Male, age 61, both hemispheres 20.4
Nucleus of the diagonal band
nTPM: 110.4
1812 Female, age 91, both hemispheres 124.8
2775 Male, age 80, right hemisphere 121.8
2195 Female, age 85, both hemispheres 108.9
2029 Male, age 61, right hemisphere 103.5
1979 Male, age 74, unknown 93.2
Putamen
nTPM: 52.1
1937 Female, age 91, right hemisphere 65.3
1838 Male, age 80, right hemisphere 63.9
2466 Female, age 79, unknown 63.9
1829 Male, age 74, unknown 50.7
2482 Female, age 94, left hemisphere 45.7
2647 Male, age 75, left hemisphere 41.8
2489 Female, age 72, unknown 33.5
Septal nuclei
nTPM: 91.7
2031 Female, age 72, unknown 128.2
1960 Male, age 74, unknown 119.2
2009 Female, age 91, both hemispheres 107.0
2629 Female, age 94, right hemisphere 101.2
2059 Female, age 85, both hemispheres 82.3
2394 Male, age 61, left hemisphere 54.4
2199 Male, age 80, right hemisphere 49.6
Stria terminalis, bed nucleus
nTPM: 113.3
1974 Female, age 91, both hemispheres 138.6
2486 Female, age 94, both hemispheres 115.6
2201 Male, age 74, unknown 85.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 37.3
Samples: 246

Max nTPM: 94.5
Min nTPM: 11.3
Std nTPM: 16.2
Median nTPM: 34.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 92.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 91.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 82.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 77.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 74.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 74.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 73.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 70.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 68.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 67.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 66.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 64.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 64.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 62.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 62.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 62.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 62.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 61.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 61.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 60.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 59.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 59.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 58.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 56.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 55.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 55.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 55.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 54.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 54.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 54.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 54.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 53.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 52.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 52.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 52.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 52.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 52.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 51.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 51.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 51.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 51.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 51.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 51.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 50.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 50.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 50.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 50.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 50.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 49.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 49.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 49.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 48.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 48.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 48.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 48.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 47.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 47.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 46.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 46.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 46.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 46.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 46.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 45.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 44.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 44.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 44.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 43.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 43.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 43.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 43.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 43.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 42.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 42.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 41.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 41.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 41.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 41.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 40.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 40.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 40.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 40.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 40.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 39.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 39.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 39.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 39.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 39.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 38.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 38.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 38.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 38.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 37.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 37.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 37.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 37.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 36.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 36.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 36.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 36.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 35.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 35.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 34.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 34.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 34.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 34.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 34.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 34.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 34.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 33.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 33.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 33.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 33.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 33.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 33.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 33.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 32.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 32.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 32.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 32.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 32.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 32.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 31.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 31.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 31.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 31.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 30.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 30.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 30.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 30.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 30.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 30.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 29.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 29.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 29.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 29.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 28.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 28.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 28.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 28.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 28.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 28.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 28.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 27.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 27.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 27.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 27.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 27.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 27.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 27.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 27.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 27.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 27.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 27.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 26.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 26.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 26.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 26.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 26.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 26.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 25.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 25.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 25.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 24.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 24.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 24.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 24.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 24.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 24.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 24.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 24.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 24.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 24.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 24.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 24.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 24.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 23.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 23.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 23.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 23.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 23.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 23.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 23.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 22.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 22.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 22.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 22.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 21.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 21.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 20.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 20.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 19.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 19.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 19.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 19.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 19.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 19.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 18.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 18.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 18.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 18.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 18.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 18.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 18.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 17.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 17.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 17.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 17.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 17.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 17.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 17.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 16.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 15.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 15.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 15.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 15.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 15.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 15.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 14.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 14.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 13.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 12.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 11.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 52.5
Samples: 246

Max nTPM: 162.4
Min nTPM: 9.7
Std nTPM: 24.2
Median nTPM: 52.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 162.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 107.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 105.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 105.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 105.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 99.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 95.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 94.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 93.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 93.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 93.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 93.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 92.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 92.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 92.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 92.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 92.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 91.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 90.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 90.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 89.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 88.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 88.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 86.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 86.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 86.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 85.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 84.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 83.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 82.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 81.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 79.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 79.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 79.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 78.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 78.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 78.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 77.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 76.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 76.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 76.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 76.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 75.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 75.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 75.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 74.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 74.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 73.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 73.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 73.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 73.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 73.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 72.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 70.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 70.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 70.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 69.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 69.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 69.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 68.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 68.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 67.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 67.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 67.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 66.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 66.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 66.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 66.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 65.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 65.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 64.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 64.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 63.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 63.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 63.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 62.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 62.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 61.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 61.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 61.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 61.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 60.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 60.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 59.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 59.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 59.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 58.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 58.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 58.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 57.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 57.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 57.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 56.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 56.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 55.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 54.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 54.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 54.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 54.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 53.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 53.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 53.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 53.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 53.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 53.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 53.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 53.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 52.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 52.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 52.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 52.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 52.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 51.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 51.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 51.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 51.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 51.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 50.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 50.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 49.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 49.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 49.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 48.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 48.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 48.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 47.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 47.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 46.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 46.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 46.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 46.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 45.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 45.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 44.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 44.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 44.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 44.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 44.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 44.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 43.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 43.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 43.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 42.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 42.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 42.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 40.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 40.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 40.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 39.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 39.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 38.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 37.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 36.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 36.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 36.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 35.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 35.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 35.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 35.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 35.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 34.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 34.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 34.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 34.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 34.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 33.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 33.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 33.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 32.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 32.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 31.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 31.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 31.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 30.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 30.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 29.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 28.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 28.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 28.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 28.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 27.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 27.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 27.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 26.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 26.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 26.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 26.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 26.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 26.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 26.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 25.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 25.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 24.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 24.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 24.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 24.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 24.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 23.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 23.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 23.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 21.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 21.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 21.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 20.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 19.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 19.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 19.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 19.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 19.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 18.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 18.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 17.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 16.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 15.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 15.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 15.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 14.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 14.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 14.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 13.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 13.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 12.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 12.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 9.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 33.5
Samples: 205

Max nTPM: 95.2
Min nTPM: 10.1
Std nTPM: 15.4
Median nTPM: 31.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 95.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 81.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 78.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 71.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 68.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 65.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 65.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 61.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 60.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 59.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 59.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 58.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 57.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 57.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 56.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 56.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 56.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 55.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 55.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 55.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 55.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 54.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 52.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 52.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 51.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 51.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 51.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 51.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 51.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 50.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 49.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 49.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 49.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 48.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 48.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 48.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 48.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 48.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 47.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 47.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 46.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 45.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 44.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 44.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 43.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 43.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 42.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 42.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 42.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 41.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 41.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 41.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 40.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 40.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 40.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 39.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 39.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 38.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 38.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 37.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 37.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 36.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 36.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 36.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 36.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 36.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 36.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 36.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 35.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 35.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 35.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 34.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 34.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 34.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 34.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 34.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 33.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 33.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 33.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 33.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 33.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 33.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 33.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 33.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 32.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 32.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 32.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 32.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 32.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 32.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 32.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 32.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 31.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 31.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 30.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 30.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 30.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 30.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 30.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 30.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 30.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 29.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 29.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 29.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 29.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 28.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 28.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 28.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 27.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 27.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 27.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 27.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 27.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 27.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 26.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 26.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 26.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 26.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 26.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 26.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 26.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 25.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 25.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 25.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 25.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 24.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 24.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 23.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 23.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 23.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 23.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 22.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 22.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 22.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 22.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 22.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 22.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 22.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 22.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 21.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 21.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 21.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 21.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 21.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 21.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 20.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 20.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 20.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 20.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 20.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 20.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 20.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 20.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 19.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 19.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 19.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 19.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 18.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 18.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 18.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 18.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 17.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 17.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 17.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 16.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 16.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 16.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 16.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 16.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 15.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 15.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 15.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 14.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 14.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 14.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 14.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 14.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 14.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 14.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 13.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 12.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 12.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 12.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 11.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 11.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 10.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

121.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 75.6
FF:10164-103B2 76 years, female 75.6
Nucleus accumbens
Scaled Tags Per Million: 101.1
FF:10037-101F1 23-56 years, mixed 101.1
Putamen
Scaled Tags Per Million: 121.3
FF:10176-103C5 60 years, female 121.3
Globus pallidus
Scaled Tags Per Million: 33.3
FF:10175-103C4 60 years, female 53.3
FF:10161-103A8 76 years, female 13.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 75.0
Samples: 4

Max nTPM: 78.8
Min nTPM: 70.5
Sample A Male 72.3
Sample B Male 70.5
Sample C Female 78.2
Sample D Female 78.8
Septum
nTPM: 97.7
Samples: 4

Max nTPM: 107.5
Min nTPM: 93.8
Sample A Male 107.5
Sample B Male 94.1
Sample C Female 93.8
Sample D Female 95.2
Ventral forebrain
nTPM: 89.9
Samples: 4

Max nTPM: 97.2
Min nTPM: 85.9
Sample A Male 85.9
Sample B Male 97.2
Sample C Female 87.2
Sample D Female 89.2

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


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