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ARL6IP4
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  • ARL6IP4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:147.9 nTPM
FANTOM5:128.0 Scaled Tags Per Million
Pig:12.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA052098
Glial cells Medium
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 147.9
Samples: 246

Max nTPM: 324.9
Min nTPM: 72.5
Std nTPM: 39.4
Median nTPM: 142.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 324.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 294.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 290.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 280.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 278.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 276.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 259.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 259.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 247.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 222.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 220.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 216.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 216.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 210.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 210.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 209.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 204.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 203.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 202.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 202.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 201.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 200.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 196.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 196.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 195.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 192.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 190.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 190.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 188.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 187.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 186.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 186.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 185.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 185.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 185.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 184.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 183.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 182.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 181.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 180.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 179.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 178.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 176.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 176.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 175.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 175.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 174.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 174.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 173.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 173.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 173.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 173.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 172.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 172.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 171.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 170.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 169.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 169.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 168.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 167.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 167.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 166.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 165.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 165.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 164.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 164.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 164.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 164.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 163.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 161.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 161.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 161.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 161.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 159.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 158.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 158.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 158.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 158.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 157.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 157.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 156.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 155.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 154.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 154.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 153.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 153.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 151.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 151.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 151.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 151.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 149.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 149.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 149.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 148.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 148.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 148.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 148.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 148.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 148.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 148.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 147.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 147.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 147.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 146.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 146.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 146.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 145.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 145.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 145.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 144.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 144.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 144.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 144.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 144.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 143.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 143.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 143.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 142.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 142.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 142.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 142.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 141.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 141.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 141.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 141.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 141.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 140.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 139.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 138.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 137.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 137.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 136.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 136.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 136.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 136.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 135.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 135.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 135.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 135.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 134.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 134.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 134.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 134.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 133.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 132.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 132.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 132.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 131.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 131.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 131.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 130.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 130.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 130.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 130.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 130.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 130.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 129.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 129.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 129.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 128.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 128.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 127.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 127.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 126.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 126.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 126.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 126.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 126.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 125.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 125.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 125.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 125.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 124.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 124.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 124.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 123.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 123.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 123.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 123.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 123.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 121.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 121.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 121.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 121.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 121.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 121.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 120.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 119.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 119.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 119.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 119.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 118.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 117.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 116.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 116.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 115.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 115.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 115.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 115.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 114.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 114.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 114.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 113.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 113.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 113.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 110.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 110.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 110.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 110.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 108.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 107.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 107.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 107.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 106.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 106.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 106.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 106.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 105.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 105.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 103.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 103.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 103.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 101.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 98.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 98.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 96.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 96.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 95.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 92.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 92.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 92.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 90.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 87.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 87.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 86.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 72.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

128.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 128.0
FF:10164-103B2 76 years, female 128.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.6
Pig sample Sample description nTPM
Caudate
nTPM: 12.6
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 13.0
Sample C Male 13.4
Sample D Male 12.2

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