We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ATP6AP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ATP6AP2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.7 nTPM
HPA Brain:109.9 nTPM
GTEx:71.7 nTPM
FANTOM5:207.1 Scaled Tags Per Million
Pig:103.3 nTPM
Mouse:278.4 nTPM
Allen mouse:12.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003156
Glial cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 94.4
2288 Male, age 75, left hemisphere 126.9
2290 Female, age 72, unknown 103.1
2846 Female, age 79, unknown 101.1
2481 Female, age 94, left hemisphere 100.4
1857 Female, age 85, left hemisphere 100.1
1781 Male, age 74, unknown 89.4
1854 Male, age 80, left hemisphere 75.6
2289 Male, age 61, right hemisphere 58.3
Globus pallidus, externus
nTPM: 72.1
2772 Female, age 79, unknown 116.5
2395 Male, age 75, both hemispheres 109.4
1996 Male, age 80, right hemisphere 73.2
2646 Male, age 61, right hemisphere 39.6
2567 Female, age 72, unknown 21.9
Globus pallidus, internus
nTPM: 67.7
2287 Male, age 75, right hemisphere 91.5
2483 Female, age 94, right hemisphere 87.7
1818 Male, age 74, unknown 72.5
2037 Male, age 80, right hemisphere 72.1
2778 Female, age 91, both hemispheres 69.0
2111 Female, age 85, right hemisphere 45.9
2566 Female, age 72, unknown 35.1
Nucleus accumbens
nTPM: 97.0
2286 Male, age 75, left hemisphere 145.3
1856 Female, age 91, right hemisphere 127.3
1806 Female, age 85, left hemisphere 96.9
2824 Male, age 61, right hemisphere 96.2
2698 Female, age 72, unknown 93.5
1783 Male, age 74, unknown 81.3
2732 Male, age 80, right hemisphere 67.8
2391 Female, age 94, left hemisphere 67.7
Nucleus basalis of Meynert
nTPM: 63.8
2821 Male, age 75, both hemispheres 77.0
2484 Female, age 94, left hemisphere 70.5
2393 Male, age 80, right hemisphere 63.5
2569 Male, age 61, both hemispheres 44.0
Nucleus of the diagonal band
nTPM: 109.9
2029 Male, age 61, right hemisphere 129.8
1812 Female, age 91, both hemispheres 117.6
2195 Female, age 85, both hemispheres 113.1
2775 Male, age 80, right hemisphere 108.3
1979 Male, age 74, unknown 80.8
Putamen
nTPM: 80.3
2482 Female, age 94, left hemisphere 118.7
1937 Female, age 91, right hemisphere 110.1
2466 Female, age 79, unknown 100.5
1838 Male, age 80, right hemisphere 89.2
1829 Male, age 74, unknown 73.1
2489 Female, age 72, unknown 36.2
2647 Male, age 75, left hemisphere 33.9
Septal nuclei
nTPM: 104.7
2031 Female, age 72, unknown 155.4
2629 Female, age 94, right hemisphere 124.9
1960 Male, age 74, unknown 122.3
2009 Female, age 91, both hemispheres 108.9
2059 Female, age 85, both hemispheres 87.5
2199 Male, age 80, right hemisphere 71.9
2394 Male, age 61, left hemisphere 62.3
Stria terminalis, bed nucleus
nTPM: 109.0
1974 Female, age 91, both hemispheres 117.3
2486 Female, age 94, both hemispheres 108.3
2201 Male, age 74, unknown 101.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.3
Samples: 246

Max nTPM: 127.1
Min nTPM: 35.0
Std nTPM: 14.8
Median nTPM: 60.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 127.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 118.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 116.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 112.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 109.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 108.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 106.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 105.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 103.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 95.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 93.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 92.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 91.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 90.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 88.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 88.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 87.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 87.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 85.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 84.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 84.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 84.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 82.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 82.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 82.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 82.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 81.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 80.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 79.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 79.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 79.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 78.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 77.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 77.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 76.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 76.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 74.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 74.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 74.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 74.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 73.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 73.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 73.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 73.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 73.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 73.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 73.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 72.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 72.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 72.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 71.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 71.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 71.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 71.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 71.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 71.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 70.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 70.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 70.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 69.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 69.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 69.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 68.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 68.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 68.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 68.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 67.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 67.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 67.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 66.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 66.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 66.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 65.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 64.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 64.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 64.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 64.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 64.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 64.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 64.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 64.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 63.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 63.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 63.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 63.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 63.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 62.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 62.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 62.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 62.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 62.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 62.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 62.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 62.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 61.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 61.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 61.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 61.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 61.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 61.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 60.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 60.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 60.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 60.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 60.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 59.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 59.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 59.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 59.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 59.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 59.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 59.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 59.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 59.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 59.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 59.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 58.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 58.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 58.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 58.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 58.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 58.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 58.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 57.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 57.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 57.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 56.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 56.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 56.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 56.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 55.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 55.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 55.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 55.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 55.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 55.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 55.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 55.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 54.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 54.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 54.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 54.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 54.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 54.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 54.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 53.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 53.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 53.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 53.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 53.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 53.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 53.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 53.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 53.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 53.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 52.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 52.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 52.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 52.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 52.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 52.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 52.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 51.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 51.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 51.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 51.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 51.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 51.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 51.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 51.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 51.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 51.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 51.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 51.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 50.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 50.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 50.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 50.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 50.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 50.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 49.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 49.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 49.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 49.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 48.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 48.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 48.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 48.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 48.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 47.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 47.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 47.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 45.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 45.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 44.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 43.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 42.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 42.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 42.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 40.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 39.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 38.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 35.0
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 71.7
Samples: 246

Max nTPM: 137.3
Min nTPM: 44.8
Std nTPM: 16.6
Median nTPM: 70.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 137.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 133.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 125.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 120.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 116.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 115.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 114.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 114.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 108.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 107.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 104.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 102.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 102.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 102.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 101.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 101.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 97.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 96.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 95.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 95.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 95.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 94.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 93.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 93.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 93.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 93.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 92.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 91.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 91.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 90.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 90.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 89.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 89.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 89.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 87.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 87.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 87.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 86.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 86.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 86.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 85.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 85.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 85.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 85.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 85.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 84.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 84.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 83.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 83.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 82.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 82.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 82.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 81.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 81.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 81.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 81.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 81.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 80.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 80.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 80.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 79.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 79.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 79.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 79.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 79.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 78.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 78.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 78.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 78.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 78.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 78.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 77.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 77.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 77.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 77.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 76.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 76.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 76.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 76.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 76.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 76.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 75.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 75.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 75.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 75.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 74.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 74.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 74.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 74.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 74.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 74.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 73.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 73.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 73.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 73.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 73.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 73.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 73.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 73.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 73.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 72.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 72.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 72.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 72.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 72.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 72.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 71.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 71.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 71.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 71.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 71.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 71.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 71.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 71.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 71.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 70.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 70.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 70.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 70.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 70.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 70.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 70.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 69.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 69.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 69.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 69.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 68.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 68.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 68.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 68.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 67.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 67.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 67.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 67.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 67.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 67.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 67.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 66.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 66.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 66.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 66.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 66.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 66.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 66.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 65.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 65.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 65.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 65.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 65.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 65.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 64.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 64.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 64.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 64.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 64.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 63.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 63.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 63.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 62.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 62.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 62.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 62.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 62.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 62.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 62.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 61.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 61.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 61.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 60.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 60.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 60.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 60.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 60.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 60.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 60.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 60.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 59.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 59.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 59.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 59.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 59.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 59.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 59.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 59.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 58.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 58.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 58.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 58.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 57.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 57.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 57.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 57.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 57.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 57.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 56.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 56.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 56.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 56.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 55.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 55.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 54.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 53.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 53.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 53.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 53.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 52.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 52.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 52.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 51.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 51.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 50.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 50.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 50.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 50.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 49.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 49.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 49.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 49.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 48.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 48.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 48.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 47.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 46.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 46.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 46.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 45.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 45.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 44.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 63.3
Samples: 205

Max nTPM: 107.3
Min nTPM: 38.3
Std nTPM: 12.0
Median nTPM: 61.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 107.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 98.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 96.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 93.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 93.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 90.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 89.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 88.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 87.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 84.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 83.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 83.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 82.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 81.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 81.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 81.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 81.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 81.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 81.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 80.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 79.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 78.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 77.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 77.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 77.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 77.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 77.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 77.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 77.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 76.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 76.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 75.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 75.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 74.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 74.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 74.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 74.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 74.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 74.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 74.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 74.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 73.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 73.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 72.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 72.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 72.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 71.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 71.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 71.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 71.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 70.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 69.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 69.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 69.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 69.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 69.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 68.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 68.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 68.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 68.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 67.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 67.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 67.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 67.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 67.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 67.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 66.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 66.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 66.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 65.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 65.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 65.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 65.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 65.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 65.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 65.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 65.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 65.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 64.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 64.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 64.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 64.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 64.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 63.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 63.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 63.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 63.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 63.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 63.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 62.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 62.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 62.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 62.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 62.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 62.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 62.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 62.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 62.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 61.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 61.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 61.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 61.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 61.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 61.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 60.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 60.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 60.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 60.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 60.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 60.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 60.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 59.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 59.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 59.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 59.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 59.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 59.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 58.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 58.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 58.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 58.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 58.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 58.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 58.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 58.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 57.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 57.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 57.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 57.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 57.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 57.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 57.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 57.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 56.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 56.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 56.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 56.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 56.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 56.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 56.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 56.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 55.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 55.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 55.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 55.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 55.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 54.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 54.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 54.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 54.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 54.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 54.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 53.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 53.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 53.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 52.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 52.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 52.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 52.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 52.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 52.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 52.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 52.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 52.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 52.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 51.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 51.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 51.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 51.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 51.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 50.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 49.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 49.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 48.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 48.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 47.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 47.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 46.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 46.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 45.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 45.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 43.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 42.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 41.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 41.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 41.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 40.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 39.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 38.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

207.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 140.8
FF:10164-103B2 76 years, female 140.8
Nucleus accumbens
Scaled Tags Per Million: 207.1
FF:10037-101F1 23-56 years, mixed 207.1
Putamen
Scaled Tags Per Million: 187.6
FF:10176-103C5 60 years, female 187.6
Globus pallidus
Scaled Tags Per Million: 136.4
FF:10175-103C4 60 years, female 179.7
FF:10161-103A8 76 years, female 93.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.3
Pig sample Sample description nTPM
Caudate
nTPM: 84.4
Samples: 4

Max nTPM: 95.5
Min nTPM: 78.3
Sample A Female 78.8
Sample B Female 78.3
Sample C Male 95.5
Sample D Male 84.9
Putamen
nTPM: 103.3
Samples: 4

Max nTPM: 153.2
Min nTPM: 81.8
Sample A Female 89.3
Sample B Female 81.8
Sample C Male 153.2
Sample D Male 88.8
Septum
nTPM: 90.3
Samples: 4

Max nTPM: 118.5
Min nTPM: 69.6
Sample A Female 92.8
Sample B Female 69.6
Sample C Male 118.5
Sample D Male 80.1
Ventral pallidum
nTPM: 82.9
Samples: 4

Max nTPM: 104.3
Min nTPM: 74.9
Sample A Female 76.7
Sample B Female 74.9
Sample C Male 104.3
Sample D Male 75.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 197.5
Samples: 4

Max nTPM: 213.0
Min nTPM: 178.1
Sample A Male 195.2
Sample B Male 178.1
Sample C Female 213.0
Sample D Female 203.7
Septum
nTPM: 278.4
Samples: 4

Max nTPM: 311.1
Min nTPM: 253.2
Sample A Male 263.6
Sample B Male 311.1
Sample C Female 285.5
Sample D Female 253.2
Ventral forebrain
nTPM: 255.8
Samples: 4

Max nTPM: 264.2
Min nTPM: 246.4
Sample A Male 250.5
Sample B Male 246.4
Sample C Female 264.2
Sample D Female 262.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.7
69015578 Antisense, RP_050315_01_C06, Mouse strain C57BL/6J (56 days, male) 10.7
Pallidum
Expression energy: 12.5
69015578 Antisense, RP_050315_01_C06, Mouse strain C57BL/6J (56 days, male) 12.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org