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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:60.7 nTPM
HPA Brain:55.2 nTPM
GTEx:60.7 nTPM
FANTOM5:147.3 Scaled Tags Per Million
Pig:23.4 nTPM
Mouse:27.7 nTPM
Allen mouse:1.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003157Antibody CAB003678
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 47.1
2289 Male, age 61, right hemisphere 57.6
2481 Female, age 94, left hemisphere 54.5
1854 Male, age 80, left hemisphere 50.3
2290 Female, age 72, unknown 49.7
2846 Female, age 79, unknown 47.3
2288 Male, age 75, left hemisphere 41.3
1857 Female, age 85, left hemisphere 39.8
1781 Male, age 74, unknown 35.9
Globus pallidus, externus
nTPM: 46.7
1996 Male, age 80, right hemisphere 55.5
2567 Female, age 72, unknown 51.5
2772 Female, age 79, unknown 47.6
2646 Male, age 61, right hemisphere 42.3
2395 Male, age 75, both hemispheres 36.7
Globus pallidus, internus
nTPM: 39.8
2483 Female, age 94, right hemisphere 52.3
2037 Male, age 80, right hemisphere 48.4
2566 Female, age 72, unknown 41.2
2111 Female, age 85, right hemisphere 40.4
2287 Male, age 75, right hemisphere 34.3
1818 Male, age 74, unknown 33.7
2778 Female, age 91, both hemispheres 28.3
Nucleus accumbens
nTPM: 31.3
2391 Female, age 94, left hemisphere 47.6
2698 Female, age 72, unknown 37.8
2732 Male, age 80, right hemisphere 35.1
2286 Male, age 75, left hemisphere 35.0
1806 Female, age 85, left hemisphere 33.9
1783 Male, age 74, unknown 28.7
1856 Female, age 91, right hemisphere 18.1
2824 Male, age 61, right hemisphere 14.2
Nucleus basalis of Meynert
nTPM: 55.2
2821 Male, age 75, both hemispheres 71.1
2484 Female, age 94, left hemisphere 57.8
2393 Male, age 80, right hemisphere 47.8
2569 Male, age 61, both hemispheres 44.0
Nucleus of the diagonal band
nTPM: 20.3
1979 Male, age 74, unknown 23.2
2029 Male, age 61, right hemisphere 23.0
2195 Female, age 85, both hemispheres 19.1
2775 Male, age 80, right hemisphere 18.7
1812 Female, age 91, both hemispheres 17.5
Putamen
nTPM: 51.1
2489 Female, age 72, unknown 92.2
2647 Male, age 75, left hemisphere 64.2
2482 Female, age 94, left hemisphere 55.9
1829 Male, age 74, unknown 49.8
1838 Male, age 80, right hemisphere 36.1
2466 Female, age 79, unknown 36.0
1937 Female, age 91, right hemisphere 23.8
Septal nuclei
nTPM: 29.6
2199 Male, age 80, right hemisphere 55.4
2394 Male, age 61, left hemisphere 40.1
2031 Female, age 72, unknown 27.5
2059 Female, age 85, both hemispheres 24.5
2629 Female, age 94, right hemisphere 23.8
2009 Female, age 91, both hemispheres 18.7
1960 Male, age 74, unknown 17.5
Stria terminalis, bed nucleus
nTPM: 16.3
2201 Male, age 74, unknown 17.4
2486 Female, age 94, both hemispheres 15.9
1974 Female, age 91, both hemispheres 15.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 52.2
Samples: 246

Max nTPM: 212.7
Min nTPM: 8.3
Std nTPM: 26.9
Median nTPM: 46.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 212.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 131.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 128.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 127.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 115.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 113.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 108.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 108.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 101.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 101.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 99.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 99.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 98.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 97.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 96.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 96.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 96.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 94.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 94.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 90.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 89.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 88.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 88.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 87.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 86.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 86.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 86.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 85.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 85.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 85.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 84.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 82.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 81.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 81.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 80.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 80.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 80.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 79.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 78.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 78.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 78.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 76.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 76.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 76.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 76.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 75.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 74.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 74.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 73.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 70.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 69.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 68.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 67.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 67.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 67.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 66.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 66.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 65.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 64.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 63.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 62.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 61.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 61.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 60.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 60.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 59.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 59.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 59.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 59.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 59.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 58.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 58.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 58.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 58.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 58.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 58.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 58.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 57.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 56.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 56.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 55.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 53.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 53.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 52.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 52.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 52.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 52.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 51.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 51.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 51.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 50.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 50.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 50.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 49.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 49.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 49.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 49.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 48.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 48.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 47.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 47.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 47.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 47.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 45.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 45.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 45.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 45.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 45.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 45.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 44.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 44.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 43.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 43.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 43.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 43.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 42.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 42.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 42.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 42.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 41.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 41.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 41.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 41.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 41.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 41.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 40.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 40.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 39.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 39.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 38.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 38.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 38.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 38.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 38.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 38.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 37.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 37.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 36.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 35.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 35.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 35.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 35.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 35.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 35.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 35.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 34.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 34.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 34.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 34.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 33.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 33.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 33.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 32.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 32.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 32.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 31.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 31.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 31.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 31.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 31.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 31.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 30.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 30.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 30.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 30.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 30.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 30.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 30.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 29.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 29.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 29.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 29.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 28.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 28.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 28.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 28.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 28.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 27.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 27.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 27.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 26.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 26.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 26.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 26.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 25.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 25.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 25.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 25.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 24.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 23.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 23.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 23.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 23.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 22.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 22.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 21.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 21.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 21.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 21.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 20.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 20.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 20.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 20.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 19.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 19.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 18.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 17.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 17.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 17.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 16.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 16.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 14.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 13.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 13.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 12.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 9.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 8.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 29.3
Samples: 246

Max nTPM: 103.0
Min nTPM: 2.7
Std nTPM: 17.3
Median nTPM: 25.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 103.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 102.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 95.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 94.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 92.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 85.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 72.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 72.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 69.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 69.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 64.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 62.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 62.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 62.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 60.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 60.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 60.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 59.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 59.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 57.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 56.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 55.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 54.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 53.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 53.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 52.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 51.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 50.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 49.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 49.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 48.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 48.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 47.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 46.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 45.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 45.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 44.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 43.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 42.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 41.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 41.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 40.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 40.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 40.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 40.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 39.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 38.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 38.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 37.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 37.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 37.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 37.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 36.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 36.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 36.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 36.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 36.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 35.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 35.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 35.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 35.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 35.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 34.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 34.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 34.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 34.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 34.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 33.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 33.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 32.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 32.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 32.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 31.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 31.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 31.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 31.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 31.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 31.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 30.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 30.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 30.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 30.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 30.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 30.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 30.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 30.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 30.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 30.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 29.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 29.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 29.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 29.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 29.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 29.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 28.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 28.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 28.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 28.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 28.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 28.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 28.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 27.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 27.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 27.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 27.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 27.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 26.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 26.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 26.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 26.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 26.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 26.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 26.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 26.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 26.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 26.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 25.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 25.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 25.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 25.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 25.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 25.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 24.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 24.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 24.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 24.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 24.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 23.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 23.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 23.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 23.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 23.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 23.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 23.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 23.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 23.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 23.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 22.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 22.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 22.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 22.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 22.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 22.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 22.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 22.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 22.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 22.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 22.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 22.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 22.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 21.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 21.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 21.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 21.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 21.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 21.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 21.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 21.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 20.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 20.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 20.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 20.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 20.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 20.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 20.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 20.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 19.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 19.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 19.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 19.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 18.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 18.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 18.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 18.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 18.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 18.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 18.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 18.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 18.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 18.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 18.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 18.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 17.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 17.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 17.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 17.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 17.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 16.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 16.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 16.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 16.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 16.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 16.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 16.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 16.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 16.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 15.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 15.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 15.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 15.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 15.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 15.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 15.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 15.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 15.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 14.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 14.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 14.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 14.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 14.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 14.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 14.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 14.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 13.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 13.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 13.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 13.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 13.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 13.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 13.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 13.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 13.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 13.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 13.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 12.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 12.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 12.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 12.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 11.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 11.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 10.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 10.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 10.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 9.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 9.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 9.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 8.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 7.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 7.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 7.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 60.7
Samples: 205

Max nTPM: 182.0
Min nTPM: 9.9
Std nTPM: 31.0
Median nTPM: 54.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 182.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 179.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 169.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 168.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 150.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 142.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 138.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 133.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 127.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 125.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 121.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 121.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 111.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 108.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 105.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 104.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 103.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 102.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 101.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 99.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 99.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 98.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 96.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 96.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 92.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 92.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 91.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 90.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 89.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 89.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 88.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 86.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 86.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 84.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 84.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 84.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 84.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 83.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 83.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 82.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 81.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 81.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 81.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 80.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 80.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 79.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 78.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 78.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 78.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 77.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 76.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 75.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 74.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 73.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 73.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 73.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 73.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 72.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 72.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 72.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 71.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 71.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 70.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 69.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 69.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 69.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 68.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 68.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 68.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 68.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 67.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 67.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 66.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 66.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 66.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 64.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 64.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 63.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 63.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 62.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 61.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 61.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 61.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 61.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 60.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 60.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 60.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 60.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 59.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 58.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 58.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 58.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 58.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 57.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 57.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 57.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 57.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 56.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 55.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 54.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 54.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 53.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 53.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 52.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 52.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 52.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 51.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 51.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 50.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 50.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 49.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 48.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 48.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 48.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 48.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 48.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 47.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 47.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 47.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 47.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 45.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 45.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 45.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 45.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 44.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 44.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 43.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 43.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 42.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 42.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 42.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 42.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 42.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 42.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 42.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 42.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 42.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 41.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 40.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 40.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 40.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 40.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 40.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 40.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 40.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 39.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 39.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 38.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 38.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 38.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 37.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 37.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 37.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 36.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 36.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 36.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 36.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 35.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 35.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 35.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 34.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 34.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 34.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 34.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 33.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 33.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 33.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 32.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 32.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 31.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 31.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 31.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 31.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 31.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 30.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 30.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 30.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 29.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 28.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 28.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 27.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 27.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 25.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 25.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 24.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 24.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 21.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 21.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 20.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 19.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 19.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 18.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 17.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 15.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 9.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

147.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 100.0
FF:10164-103B2 76 years, female 100.0
Nucleus accumbens
Scaled Tags Per Million: 133.5
FF:10037-101F1 23-56 years, mixed 133.5
Putamen
Scaled Tags Per Million: 55.9
FF:10176-103C5 60 years, female 55.9
Globus pallidus
Scaled Tags Per Million: 147.3
FF:10161-103A8 76 years, female 200.4
FF:10175-103C4 60 years, female 94.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.4
Pig sample Sample description nTPM
Caudate
nTPM: 16.9
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.9
Sample A Female 16.6
Sample B Female 15.9
Sample C Male 20.0
Sample D Male 14.9
Putamen
nTPM: 23.5
Samples: 4

Max nTPM: 27.4
Min nTPM: 15.7
Sample A Female 27.4
Sample B Female 15.7
Sample C Male 26.6
Sample D Male 24.2
Septum
nTPM: 22.3
Samples: 4

Max nTPM: 32.8
Min nTPM: 13.0
Sample A Female 27.5
Sample B Female 15.9
Sample C Male 32.8
Sample D Male 13.0
Ventral pallidum
nTPM: 21.2
Samples: 4

Max nTPM: 26.9
Min nTPM: 18.2
Sample A Female 18.2
Sample B Female 21.1
Sample C Male 26.9
Sample D Male 18.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 13.2
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.2
Sample A Male 12.2
Sample B Male 12.2
Sample C Female 13.3
Sample D Female 14.9
Septum
nTPM: 15.2
Samples: 4

Max nTPM: 24.3
Min nTPM: 11.7
Sample A Male 24.3
Sample B Male 11.7
Sample C Female 13.1
Sample D Female 11.8
Ventral forebrain
nTPM: 27.7
Samples: 4

Max nTPM: 41.6
Min nTPM: 17.5
Sample A Male 17.5
Sample B Male 33.4
Sample C Female 41.6
Sample D Female 18.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.0
68443178 Antisense, RP_050111_01_E05, Mouse strain C57BL/6J (56 days, male) 1.0
Pallidum
Expression energy: 1.0
68443178 Antisense, RP_050111_01_E05, Mouse strain C57BL/6J (56 days, male) 1.0

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