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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:174.1 nTPM
GTEx:174.1 nTPM
FANTOM5:368.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003157Antibody CAB003678
Squamous epithelial cells LowNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 174.1
Samples: 156

Max nTPM: 766.8
Min nTPM: 25.6
Std nTPM: 125.3
Median nTPM: 136.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 766.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 614.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 590.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 565.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 510.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 427.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 426.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 410.4
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 407.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 397.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 358.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 349.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 344.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 341.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 338.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 336.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 336.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 332.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 326.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 322.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 317.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 298.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 289.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 289.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 287.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 282.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 282.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 281.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 274.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 268.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 262.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 258.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 252.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 245.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 240.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 231.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 229.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 229.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 227.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 226.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 225.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 224.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 224.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 224.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 221.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 219.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 218.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 212.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 210.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 205.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 197.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 193.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 192.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 192.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 185.8
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 185.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 178.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 176.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 174.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 173.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 170.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 169.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 168.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 166.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 165.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 161.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 160.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 155.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 154.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 151.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 148.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 147.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 147.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 146.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 144.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 144.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 142.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 137.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 136.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 135.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 131.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 130.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 128.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 127.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 126.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 125.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 125.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 121.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 121.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 121.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 118.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 118.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 116.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 116.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 115.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 115.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 110.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 110.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 109.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 108.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 107.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 105.2
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 105.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 101.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 100.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 98.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 98.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 97.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 95.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 95.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 93.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 93.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 91.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 90.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 88.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 87.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 85.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 83.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 82.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 79.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 78.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 77.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 76.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 74.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 73.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 70.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 68.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 67.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 67.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 64.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 63.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 62.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 61.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 61.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 60.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 60.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 60.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 60.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 59.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 57.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 55.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 52.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 52.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 50.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 49.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 49.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 49.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 45.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 44.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 43.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 41.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 35.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 33.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 32.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 31.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 25.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

368.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 368.2
FF:10204-103F6 68 years, female 368.2

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