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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:56.4 nTPM
HPA Brain:112.2 nTPM
GTEx:56.4 nTPM
FANTOM5:283.0 Scaled Tags Per Million
Pig:109.9 nTPM
Mouse:146.1 nTPM
Allen mouse:6.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB024875
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 95.5
2481 Female, age 94, left hemisphere 116.2
2288 Male, age 75, left hemisphere 114.0
2289 Male, age 61, right hemisphere 107.3
2290 Female, age 72, unknown 96.6
1857 Female, age 85, left hemisphere 88.5
2846 Female, age 79, unknown 81.6
1781 Male, age 74, unknown 80.9
1854 Male, age 80, left hemisphere 78.6
Globus pallidus, externus
nTPM: 91.3
2646 Male, age 61, right hemisphere 112.9
1996 Male, age 80, right hemisphere 95.0
2395 Male, age 75, both hemispheres 91.0
2772 Female, age 79, unknown 82.2
2567 Female, age 72, unknown 75.2
Globus pallidus, internus
nTPM: 94.4
2111 Female, age 85, right hemisphere 112.5
2778 Female, age 91, both hemispheres 101.0
1818 Male, age 74, unknown 96.5
2287 Male, age 75, right hemisphere 95.6
2037 Male, age 80, right hemisphere 91.5
2566 Female, age 72, unknown 84.0
2483 Female, age 94, right hemisphere 79.8
Nucleus accumbens
nTPM: 86.7
2286 Male, age 75, left hemisphere 111.9
2391 Female, age 94, left hemisphere 106.0
1806 Female, age 85, left hemisphere 90.6
1783 Male, age 74, unknown 85.6
2824 Male, age 61, right hemisphere 82.1
2698 Female, age 72, unknown 79.7
1856 Female, age 91, right hemisphere 72.8
2732 Male, age 80, right hemisphere 64.6
Nucleus basalis of Meynert
nTPM: 88.7
2569 Male, age 61, both hemispheres 99.9
2393 Male, age 80, right hemisphere 89.9
2821 Male, age 75, both hemispheres 86.4
2484 Female, age 94, left hemisphere 78.5
Nucleus of the diagonal band
nTPM: 111.4
2195 Female, age 85, both hemispheres 128.5
1979 Male, age 74, unknown 118.3
2775 Male, age 80, right hemisphere 106.6
2029 Male, age 61, right hemisphere 104.8
1812 Female, age 91, both hemispheres 98.9
Putamen
nTPM: 99.6
2647 Male, age 75, left hemisphere 121.3
2489 Female, age 72, unknown 107.5
2482 Female, age 94, left hemisphere 103.9
1838 Male, age 80, right hemisphere 102.1
1937 Female, age 91, right hemisphere 94.2
1829 Male, age 74, unknown 89.2
2466 Female, age 79, unknown 79.0
Septal nuclei
nTPM: 112.2
2059 Female, age 85, both hemispheres 142.4
1960 Male, age 74, unknown 122.2
2199 Male, age 80, right hemisphere 119.5
2629 Female, age 94, right hemisphere 109.0
2009 Female, age 91, both hemispheres 99.9
2031 Female, age 72, unknown 97.8
2394 Male, age 61, left hemisphere 94.7
Stria terminalis, bed nucleus
nTPM: 92.8
2201 Male, age 74, unknown 98.0
2486 Female, age 94, both hemispheres 94.7
1974 Female, age 91, both hemispheres 85.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 54.0
Samples: 246

Max nTPM: 139.9
Min nTPM: 14.9
Std nTPM: 17.8
Median nTPM: 51.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 139.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 120.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 118.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 114.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 114.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 107.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 102.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 101.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 99.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 92.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 90.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 86.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 85.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 84.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 81.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 81.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 81.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 80.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 80.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 80.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 79.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 78.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 76.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 74.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 74.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 73.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 73.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 71.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 71.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 71.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 70.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 70.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 69.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 69.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 68.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 68.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 67.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 67.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 67.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 66.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 65.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 65.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 65.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 65.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 65.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 65.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 64.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 64.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 64.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 64.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 64.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 63.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 63.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 62.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 62.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 61.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 61.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 61.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 61.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 61.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 60.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 59.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 58.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 58.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 57.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 57.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 57.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 56.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 56.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 56.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 56.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 56.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 56.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 55.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 55.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 54.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 54.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 54.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 54.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 54.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 54.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 54.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 53.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 53.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 53.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 53.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 53.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 53.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 53.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 53.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 52.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 52.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 52.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 52.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 52.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 52.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 52.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 52.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 51.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 51.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 51.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 51.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 51.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 50.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 50.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 50.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 50.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 50.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 50.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 50.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 49.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 49.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 49.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 49.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 49.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 49.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 48.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 48.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 48.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 48.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 48.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 47.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 47.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 47.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 47.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 47.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 46.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 46.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 46.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 46.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 46.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 46.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 46.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 46.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 46.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 46.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 46.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 45.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 45.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 45.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 45.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 45.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 45.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 45.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 44.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 44.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 44.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 43.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 43.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 43.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 43.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 42.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 42.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 42.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 42.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 42.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 42.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 42.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 42.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 42.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 42.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 41.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 41.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 41.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 40.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 40.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 40.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 40.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 40.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 40.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 40.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 39.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 38.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 38.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 38.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 38.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 37.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 37.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 37.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 37.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 36.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 36.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 36.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 36.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 35.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 35.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 34.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 34.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 34.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 34.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 34.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 33.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 33.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 33.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 32.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 31.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 30.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 30.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 26.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 25.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 25.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 25.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 23.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 23.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 21.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 14.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 47.4
Samples: 246

Max nTPM: 150.1
Min nTPM: 14.6
Std nTPM: 18.6
Median nTPM: 43.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 150.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 149.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 112.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 100.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 93.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 91.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 90.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 86.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 85.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 83.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 82.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 76.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 76.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 76.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 76.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 76.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 73.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 73.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 72.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 71.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 71.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 71.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 71.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 70.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 70.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 70.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 70.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 70.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 70.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 69.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 69.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 67.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 67.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 67.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 66.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 64.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 64.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 63.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 63.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 63.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 63.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 62.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 62.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 62.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 61.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 61.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 60.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 60.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 59.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 58.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 58.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 58.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 58.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 58.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 57.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 57.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 57.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 56.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 56.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 56.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 55.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 55.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 55.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 54.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 54.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 54.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 54.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 53.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 53.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 53.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 53.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 52.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 52.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 52.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 51.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 51.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 51.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 51.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 51.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 51.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 50.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 50.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 50.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 50.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 49.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 49.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 49.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 49.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 49.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 49.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 48.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 48.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 48.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 48.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 48.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 48.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 48.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 48.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 47.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 47.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 47.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 47.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 46.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 46.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 46.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 46.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 46.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 45.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 45.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 45.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 45.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 45.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 45.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 44.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 44.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 44.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 44.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 44.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 44.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 43.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 43.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 43.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 43.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 43.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 43.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 42.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 42.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 42.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 42.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 42.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 42.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 42.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 41.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 41.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 41.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 41.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 41.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 41.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 41.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 41.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 40.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 40.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 40.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 40.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 40.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 40.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 40.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 40.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 40.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 40.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 40.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 39.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 39.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 39.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 39.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 39.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 39.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 38.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 38.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 38.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 38.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 38.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 38.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 38.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 38.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 38.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 37.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 37.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 37.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 37.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 36.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 36.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 36.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 36.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 36.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 36.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 36.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 35.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 35.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 35.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 35.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 35.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 35.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 35.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 35.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 34.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 34.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 34.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 34.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 33.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 33.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 33.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 33.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 33.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 33.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 33.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 32.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 32.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 32.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 32.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 32.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 31.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 31.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 31.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 31.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 30.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 30.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 30.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 30.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 30.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 30.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 29.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 29.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 29.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 29.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 29.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 28.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 28.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 28.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 28.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 26.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 25.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 25.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 25.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 25.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 24.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 24.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 23.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 23.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 23.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 22.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 22.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 22.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 22.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 21.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 21.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 21.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 20.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 20.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 18.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 14.6
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Brain - Putamen (basal ganglia)
Average nTPM: 56.4
Samples: 205

Max nTPM: 184.7
Min nTPM: 19.6
Std nTPM: 20.7
Median nTPM: 53.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 184.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 144.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 141.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 115.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 105.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 103.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 101.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 98.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 93.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 92.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 90.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 88.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 85.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 85.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 85.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 84.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 83.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 82.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 81.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 81.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 80.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 80.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 79.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 79.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 78.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 78.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 78.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 77.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 77.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 76.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 74.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 73.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 73.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 71.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 67.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 67.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 67.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 66.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 66.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 66.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 65.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 65.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 65.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 65.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 64.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 64.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 63.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 63.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 63.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 63.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 62.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 62.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 61.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 61.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 61.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 61.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 61.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 60.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 60.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 60.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 60.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 60.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 60.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 59.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 59.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 59.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 59.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 59.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 59.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 59.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 58.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 57.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 57.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 57.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 56.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 56.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 56.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 56.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 56.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 55.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 55.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 55.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 55.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 54.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 54.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 54.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 54.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 54.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 54.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 54.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 54.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 54.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 54.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 53.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 53.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 53.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 53.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 53.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 52.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 52.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 52.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 51.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 51.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 51.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 51.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 51.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 50.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 50.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 50.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 50.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 50.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 49.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 49.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 49.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 49.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 48.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 48.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 48.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 48.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 47.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 47.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 47.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 46.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 46.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 46.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 46.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 46.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 45.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 45.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 45.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 45.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 45.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 45.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 44.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 44.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 44.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 44.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 44.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 44.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 43.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 43.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 43.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 43.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 42.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 42.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 42.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 41.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 41.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 40.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 40.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 40.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 40.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 39.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 39.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 39.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 39.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 39.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 39.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 39.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 39.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 38.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 38.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 37.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 37.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 37.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 37.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 36.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 36.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 36.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 35.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 35.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 35.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 34.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 34.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 34.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 33.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 33.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 32.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 32.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 32.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 31.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 28.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 26.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 20.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 19.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

283.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 108.9
FF:10164-103B2 76 years, female 108.9
Nucleus accumbens
Scaled Tags Per Million: 205.0
FF:10037-101F1 23-56 years, mixed 205.0
Putamen
Scaled Tags Per Million: 193.9
FF:10176-103C5 60 years, female 193.9
Globus pallidus
Scaled Tags Per Million: 283.0
FF:10175-103C4 60 years, female 341.3
FF:10161-103A8 76 years, female 224.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.9
Pig sample Sample description nTPM
Caudate
nTPM: 84.9
Samples: 4

Max nTPM: 114.9
Min nTPM: 61.2
Sample A Female 61.2
Sample B Female 69.5
Sample C Male 114.9
Sample D Male 94.1
Putamen
nTPM: 110.0
Samples: 4

Max nTPM: 184.6
Min nTPM: 43.1
Sample A Female 43.1
Sample B Female 107.0
Sample C Male 184.6
Sample D Male 105.1
Septum
nTPM: 52.9
Samples: 4

Max nTPM: 62.6
Min nTPM: 41.0
Sample A Female 41.0
Sample B Female 62.6
Sample C Male 53.1
Sample D Male 55.0
Ventral pallidum
nTPM: 63.1
Samples: 4

Max nTPM: 74.5
Min nTPM: 49.1
Sample A Female 70.8
Sample B Female 74.5
Sample C Male 58.0
Sample D Male 49.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

146.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 141.7
Samples: 4

Max nTPM: 159.2
Min nTPM: 126.3
Sample A Male 126.3
Sample B Male 134.0
Sample C Female 159.2
Sample D Female 147.1
Septum
nTPM: 126.1
Samples: 4

Max nTPM: 134.3
Min nTPM: 118.5
Sample A Male 134.3
Sample B Male 118.5
Sample C Female 119.8
Sample D Female 131.9
Ventral forebrain
nTPM: 146.1
Samples: 4

Max nTPM: 161.9
Min nTPM: 130.0
Sample A Male 159.2
Sample B Male 133.3
Sample C Female 130.0
Sample D Female 161.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.3
77866868 Antisense, RP_070129_01_E11, Mouse strain C57BL/6J (56 days, male) 8.9
574 Antisense, RP_Baylor_103392, Mouse strain C57BL/6J (56 days, male) 3.7
573 Antisense, RP_Baylor_103392, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 4.2
77866868 Antisense, RP_070129_01_E11, Mouse strain C57BL/6J (56 days, male) 5.5
574 Antisense, RP_Baylor_103392, Mouse strain C57BL/6J (56 days, male) 3.0
573 Antisense, RP_Baylor_103392, Mouse strain C57BL/6J (56 days, male) 0.6

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