We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ANXA2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ANXA2
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:109.9 nTPM
HPA Brain:85.7 nTPM
GTEx:109.9 nTPM
FANTOM5:11.3 Scaled Tags Per Million
Pig:213.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 65.0
1981 Female, age 72, midline 89.3
2048 Male, age 55, midline 77.6
2565 Male, age 75, midline 57.3
2816 Male, age 47, midline 56.1
2194 Female, age 79, both hemispheres 44.8
Cervical spinal cord, dorsal horn
nTPM: 62.6
2173 Female, age 72, unknown 122.2
2296 Male, age 66, both hemispheres 67.7
2721 Male, age 90, both hemispheres 63.9
2069 Male, age 47, both hemispheres 49.7
1877 Male, age 55, unknown 40.9
2297 Male, age 75, both hemispheres 31.6
Cervical spinal cord, ventral horn
nTPM: 85.7
2098 Female, age 72, unknown 187.3
2809 Male, age 90, both hemispheres 116.6
2480 Male, age 75, both hemispheres 55.3
2820 Female, age 79, both hemispheres 53.3
2295 Male, age 66, both hemispheres 53.1
2068 Male, age 55, unknown 48.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 109.9
Samples: 159

Max nTPM: 541.8
Min nTPM: 28.4
Std nTPM: 67.7
Median nTPM: 93.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 541.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 364.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 319.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 310.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 253.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 245.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 244.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 241.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 230.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 219.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 218.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 212.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 206.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 205.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 204.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 185.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 180.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 175.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 174.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 172.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 168.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 165.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 159.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 158.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 156.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 154.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 150.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 149.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 148.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 148.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 147.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 146.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 145.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 143.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 142.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 140.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 139.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 139.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 139.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 136.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 134.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 132.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 130.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 129.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 128.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 126.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 125.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 124.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 122.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 120.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 119.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 118.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 116.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 116.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 115.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 112.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 112.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 111.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 111.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 111.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 111.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 107.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 107.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 107.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 105.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 105.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 105.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 105.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 104.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 103.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 101.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 100.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 99.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 98.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 98.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 97.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 97.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 95.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 94.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 93.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 92.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 91.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 91.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 91.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 90.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 90.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 90.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 89.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 87.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 87.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 85.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 85.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 84.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 83.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 83.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 83.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 83.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 82.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 81.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 81.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 78.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 77.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 76.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 74.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 74.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 74.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 74.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 72.7
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 72.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 71.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 71.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 71.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 70.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 70.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 69.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 67.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 66.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 66.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 66.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 65.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 64.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 63.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 63.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 63.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 62.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 62.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 62.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 61.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 61.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 59.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 57.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 57.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 57.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 56.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 56.3
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 55.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 54.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 54.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 52.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 51.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 50.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 49.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 48.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 48.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 48.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 47.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 47.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 47.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 45.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 44.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 39.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 39.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 36.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 34.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 34.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 32.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 31.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 29.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 28.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

11.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 11.3
FF:10181-103D1 60 years, female 16.1
FF:10159-103A6 76 years, female 6.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 171.0
Samples: 4

Max nTPM: 426.9
Min nTPM: 44.1
Sample A Female 44.1
Sample B Female 110.4
Sample C Male 426.9
Sample D Male 102.5
Ventral spinal cord
nTPM: 213.0
Samples: 4

Max nTPM: 322.6
Min nTPM: 145.9
Sample A Female 145.9
Sample B Female 232.8
Sample C Male 322.6
Sample D Male 150.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org