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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:63.6 nTPM
HPA Brain:75.5 nTPM
GTEx:63.6 nTPM
FANTOM5:345.4 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:3.1 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051507
Glial cells Not detected
Neuronal cells Low

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 49.4
2288 Male, age 75, left hemisphere 77.6
1781 Male, age 74, unknown 59.5
2846 Female, age 79, unknown 52.5
2481 Female, age 94, left hemisphere 47.9
1857 Female, age 85, left hemisphere 44.4
2290 Female, age 72, unknown 41.8
1854 Male, age 80, left hemisphere 38.0
2289 Male, age 61, right hemisphere 33.6
Globus pallidus, externus
nTPM: 65.5
2772 Female, age 79, unknown 87.4
2395 Male, age 75, both hemispheres 80.0
1996 Male, age 80, right hemisphere 64.3
2567 Female, age 72, unknown 50.5
2646 Male, age 61, right hemisphere 45.3
Globus pallidus, internus
nTPM: 75.5
2287 Male, age 75, right hemisphere 118.0
2778 Female, age 91, both hemispheres 82.8
1818 Male, age 74, unknown 75.4
2111 Female, age 85, right hemisphere 71.8
2483 Female, age 94, right hemisphere 65.8
2566 Female, age 72, unknown 59.4
2037 Male, age 80, right hemisphere 55.4
Nucleus accumbens
nTPM: 53.4
2391 Female, age 94, left hemisphere 77.5
2286 Male, age 75, left hemisphere 66.1
2698 Female, age 72, unknown 59.0
1856 Female, age 91, right hemisphere 50.5
1806 Female, age 85, left hemisphere 46.0
1783 Male, age 74, unknown 43.0
2732 Male, age 80, right hemisphere 43.0
2824 Male, age 61, right hemisphere 41.8
Nucleus basalis of Meynert
nTPM: 45.4
2821 Male, age 75, both hemispheres 64.9
2484 Female, age 94, left hemisphere 44.4
2393 Male, age 80, right hemisphere 39.6
2569 Male, age 61, both hemispheres 32.7
Nucleus of the diagonal band
nTPM: 70.3
1812 Female, age 91, both hemispheres 83.5
2775 Male, age 80, right hemisphere 75.6
2195 Female, age 85, both hemispheres 72.1
2029 Male, age 61, right hemisphere 71.1
1979 Male, age 74, unknown 49.3
Putamen
nTPM: 47.5
1937 Female, age 91, right hemisphere 55.8
2482 Female, age 94, left hemisphere 54.2
1829 Male, age 74, unknown 49.7
2647 Male, age 75, left hemisphere 48.1
2466 Female, age 79, unknown 44.7
1838 Male, age 80, right hemisphere 44.4
2489 Female, age 72, unknown 35.5
Septal nuclei
nTPM: 61.7
2031 Female, age 72, unknown 76.5
2629 Female, age 94, right hemisphere 75.4
1960 Male, age 74, unknown 72.7
2009 Female, age 91, both hemispheres 63.9
2394 Male, age 61, left hemisphere 53.0
2059 Female, age 85, both hemispheres 47.0
2199 Male, age 80, right hemisphere 43.3
Stria terminalis, bed nucleus
nTPM: 75.0
1974 Female, age 91, both hemispheres 86.3
2486 Female, age 94, both hemispheres 74.2
2201 Male, age 74, unknown 64.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 56.4
Samples: 246

Max nTPM: 143.2
Min nTPM: 23.3
Std nTPM: 19.2
Median nTPM: 54.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 143.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 126.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 123.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 120.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 117.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 114.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 107.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 105.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 101.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 97.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 97.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 96.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 93.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 91.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 87.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 86.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 85.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 84.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 84.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 83.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 80.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 78.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 78.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 78.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 77.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 77.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 77.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 77.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 76.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 75.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 75.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 75.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 75.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 75.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 75.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 74.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 72.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 71.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 71.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 69.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 69.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 69.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 68.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 68.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 68.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 67.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 67.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 67.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 66.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 66.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 66.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 66.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 66.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 65.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 64.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 64.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 64.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 64.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 63.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 63.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 63.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 61.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 61.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 61.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 60.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 60.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 60.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 60.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 60.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 60.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 60.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 59.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 59.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 59.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 59.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 59.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 59.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 59.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 59.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 58.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 58.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 58.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 58.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 58.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 58.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 58.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 58.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 57.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 57.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 57.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 57.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 56.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 56.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 56.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 56.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 56.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 56.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 56.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 55.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 55.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 54.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 54.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 54.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 54.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 54.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 54.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 53.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 53.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 53.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 52.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 52.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 52.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 52.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 52.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 52.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 51.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 51.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 51.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 51.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 51.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 51.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 51.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 50.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 50.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 50.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 49.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 49.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 49.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 49.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 48.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 48.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 48.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 48.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 48.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 47.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 47.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 47.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 47.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 47.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 46.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 46.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 46.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 46.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 46.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 46.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 46.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 46.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 45.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 45.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 44.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 44.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 44.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 44.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 44.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 44.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 44.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 43.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 43.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 43.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 43.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 43.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 42.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 42.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 42.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 41.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 41.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 40.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 39.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 39.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 39.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 38.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 38.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 37.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 37.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 37.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 36.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 36.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 36.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 36.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 36.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 35.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 35.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 35.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 35.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 34.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 34.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 34.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 34.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 34.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 34.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 34.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 34.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 33.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 33.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 33.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 33.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 31.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 30.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 29.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 29.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 29.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 28.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 28.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 27.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 25.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 24.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 24.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 23.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 58.3
Samples: 246

Max nTPM: 165.8
Min nTPM: 17.8
Std nTPM: 22.1
Median nTPM: 54.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 165.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 164.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 152.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 151.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 132.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 121.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 119.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 117.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 105.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 93.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 93.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 93.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 91.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 88.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 84.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 84.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 83.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 82.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 81.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 80.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 80.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 79.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 78.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 78.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 78.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 77.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 77.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 77.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 76.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 76.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 76.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 76.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 76.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 76.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 75.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 75.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 75.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 75.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 75.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 75.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 75.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 74.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 74.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 74.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 73.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 72.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 71.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 71.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 71.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 71.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 70.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 70.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 69.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 69.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 69.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 69.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 69.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 68.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 68.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 68.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 68.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 67.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 67.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 67.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 67.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 67.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 67.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 66.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 66.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 66.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 66.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 66.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 66.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 65.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 65.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 65.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 64.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 64.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 64.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 64.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 64.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 64.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 63.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 63.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 63.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 63.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 62.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 62.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 62.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 62.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 61.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 61.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 61.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 61.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 61.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 60.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 60.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 60.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 60.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 59.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 59.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 59.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 58.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 58.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 58.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 57.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 57.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 57.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 57.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 57.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 56.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 56.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 55.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 55.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 55.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 55.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 55.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 54.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 54.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 54.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 54.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 54.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 54.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 54.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 54.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 54.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 53.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 53.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 53.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 53.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 53.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 53.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 53.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 53.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 53.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 53.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 52.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 52.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 52.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 52.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 52.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 52.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 52.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 51.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 51.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 51.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 51.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 51.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 51.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 50.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 50.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 50.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 50.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 50.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 50.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 49.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 49.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 49.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 49.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 49.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 49.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 49.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 49.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 48.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 48.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 48.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 47.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 47.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 47.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 47.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 46.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 46.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 46.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 46.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 45.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 45.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 45.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 45.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 44.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 44.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 44.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 43.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 42.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 42.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 42.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 42.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 42.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 42.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 41.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 41.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 41.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 40.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 40.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 40.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 39.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 39.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 39.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 39.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 39.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 39.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 38.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 37.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 37.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 35.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 35.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 34.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 32.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 32.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 31.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 31.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 31.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 31.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 31.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 29.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 29.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 29.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 29.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 28.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 27.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 27.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 26.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 26.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 26.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 25.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 24.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 22.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 22.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 19.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 18.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 17.8
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Brain - Putamen (basal ganglia)
Average nTPM: 63.6
Samples: 205

Max nTPM: 187.7
Min nTPM: 15.9
Std nTPM: 22.5
Median nTPM: 60.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 187.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 148.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 138.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 127.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 122.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 119.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 116.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 116.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 112.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 110.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 99.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 95.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 94.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 92.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 90.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 90.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 90.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 90.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 87.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 87.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 87.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 86.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 85.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 85.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 85.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 84.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 84.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 84.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 83.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 82.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 82.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 82.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 82.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 82.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 81.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 81.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 81.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 81.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 80.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 79.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 79.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 79.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 79.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 77.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 77.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 76.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 76.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 76.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 75.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 75.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 74.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 74.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 74.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 73.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 73.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 72.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 72.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 72.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 72.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 72.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 71.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 71.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 71.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 71.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 69.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 69.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 69.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 69.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 68.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 68.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 67.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 67.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 67.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 67.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 66.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 66.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 66.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 66.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 65.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 65.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 65.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 65.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 64.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 64.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 64.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 64.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 63.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 62.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 62.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 61.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 61.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 61.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 61.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 60.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 60.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 60.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 60.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 60.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 59.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 59.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 59.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 59.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 59.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 58.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 58.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 58.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 58.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 58.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 58.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 57.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 56.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 56.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 56.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 56.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 55.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 55.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 55.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 55.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 55.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 55.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 55.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 55.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 54.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 54.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 54.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 53.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 53.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 53.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 53.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 53.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 52.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 52.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 52.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 51.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 51.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 51.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 50.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 50.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 50.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 49.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 49.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 49.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 49.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 48.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 48.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 48.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 47.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 47.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 47.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 47.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 47.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 47.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 47.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 46.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 46.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 45.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 45.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 45.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 44.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 44.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 42.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 42.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 42.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 42.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 42.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 41.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 41.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 39.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 39.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 38.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 38.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 37.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 36.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 36.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 36.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 34.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 33.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 32.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 31.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 30.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 30.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 27.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 27.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 27.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 25.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

345.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 120.4
FF:10164-103B2 76 years, female 120.4
Nucleus accumbens
Scaled Tags Per Million: 205.9
FF:10037-101F1 23-56 years, mixed 205.9
Putamen
Scaled Tags Per Million: 159.5
FF:10176-103C5 60 years, female 159.5
Globus pallidus
Scaled Tags Per Million: 345.4
FF:10175-103C4 60 years, female 521.8
FF:10161-103A8 76 years, female 169.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.7
Pig sample Sample description nTPM
Caudate
nTPM: 12.6
Samples: 4

Max nTPM: 14.8
Min nTPM: 10.8
Sample A Female 10.8
Sample B Female 11.8
Sample C Male 14.8
Sample D Male 13.1
Putamen
nTPM: 14.4
Samples: 4

Max nTPM: 21.8
Min nTPM: 10.1
Sample A Female 11.1
Sample B Female 10.1
Sample C Male 21.8
Sample D Male 14.6
Septum
nTPM: 18.7
Samples: 4

Max nTPM: 44.1
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 10.7
Sample C Male 44.1
Sample D Male 10.2
Ventral pallidum
nTPM: 13.3
Samples: 4

Max nTPM: 23.2
Min nTPM: 9.4
Sample A Female 9.4
Sample B Female 9.8
Sample C Male 23.2
Sample D Male 10.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.1
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.0
Sample A Male 4.2
Sample B Male 3.6
Sample C Female 2.0
Sample D Female 2.6
Septum
nTPM: 2.9
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.0
Sample A Male 2.5
Sample B Male 2.7
Sample C Female 4.2
Sample D Female 2.0
Ventral forebrain
nTPM: 2.3
Samples: 4

Max nTPM: 3.1
Min nTPM: 1.1
Sample A Male 2.2
Sample B Male 2.8
Sample C Female 3.1
Sample D Female 1.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
71492760 Antisense, RP_050913_01_E04, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71492760 Antisense, RP_050913_01_E04, Mouse strain C57BL/6J (56 days, male) 0.0

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