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C11orf54
HPA
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  • C11orf54
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

C11orf54
Synonyms PTD012
Gene descriptioni

Full gene name according to HGNC.

Chromosome 11 open reading frame 54
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q21
Chromosome location (bp) 93741591 - 93764749
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

14
Ensembl ENSG00000182919 (version 109)
Entrez gene 28970
HGNC HGNC:30204
UniProt Q9H0W9 (UniProt - Evidence at protein level)
neXtProt NX_Q9H0W9
GeneCards C11orf54
Antibodypedia C11orf54 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Exhibits ester hydrolase activity on the substrate p-nitrophenyl acetate.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables hydrolase activity, acting on ester bonds and zinc ion binding activity. Located in nuclear body. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
C11orf54-201
ENSP00000331209
ENST00000331239
Q9H0W9
[Direct mapping] Ester hydrolase C11orf54
Show all
A0A024R396
[Target identity:100%; Query identity:100%] Chromosome 11 open reading frame 54, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0008270 [zinc ion binding]
GO:0016604 [nuclear body]
GO:0016787 [hydrolase activity]
GO:0016788 [hydrolase activity, acting on ester bonds]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
315 aa
35.1 kDa
No 0
C11orf54-202
ENSP00000346403
ENST00000354421
Q9H0W9
[Direct mapping] Ester hydrolase C11orf54
Show all
A0A024R396
[Target identity:100%; Query identity:100%] Chromosome 11 open reading frame 54, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0008270 [zinc ion binding]
GO:0016604 [nuclear body]
GO:0016787 [hydrolase activity]
GO:0016788 [hydrolase activity, acting on ester bonds]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
315 aa
35.1 kDa
No 0
C11orf54-203
ENSP00000435231
ENST00000526335
E9PLB3
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0016604 [nuclear body]
Show all
149 aa
16.1 kDa
No 0
C11orf54-204
ENSP00000434291
ENST00000527003
E9PR95
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
Show all
76 aa
8.3 kDa
No 0
C11orf54-205
ENSP00000435729
ENST00000527363
E9PIP1
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0016604 [nuclear body]
Show all
171 aa
18.5 kDa
No 0
C11orf54-206
ENSP00000435113
ENST00000528099
Q9H0W9
[Direct mapping] Ester hydrolase C11orf54
Show all
A0A024R396
[Target identity:100%; Query identity:100%] Chromosome 11 open reading frame 54, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0008270 [zinc ion binding]
GO:0016604 [nuclear body]
GO:0016787 [hydrolase activity]
GO:0016788 [hydrolase activity, acting on ester bonds]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
315 aa
35.1 kDa
No 0
C11orf54-207
ENSP00000433721
ENST00000528288
Q9H0W9
[Direct mapping] Ester hydrolase C11orf54
Show all
A0A024R3B0
[Target identity:100%; Query identity:100%] Chromosome 11 open reading frame 54, isoform CRA_b; Epididymis secretory sperm binding protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0008270 [zinc ion binding]
GO:0016604 [nuclear body]
GO:0016787 [hydrolase activity]
GO:0016788 [hydrolase activity, acting on ester bonds]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
265 aa
29.5 kDa
No 0
C11orf54-208
ENSP00000434065
ENST00000530279
E9PSC3
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0016604 [nuclear body]
Show all
95 aa
10.4 kDa
No 0
C11orf54-209
ENSP00000434382
ENST00000530620
E9PQS1
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0016604 [nuclear body]
Show all
239 aa
26.3 kDa
No 0
C11orf54-211
ENSP00000434627
ENST00000531650
E9PPB5
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0016604 [nuclear body]
Show all
185 aa
20.4 kDa
No 0
C11orf54-212
ENSP00000433723
ENST00000533154
E9PJU8
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
Show all
187 aa
21.1 kDa
No 0
C11orf54-213
ENSP00000435204
ENST00000533585
E9PLC5
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0016604 [nuclear body]
Show all
100 aa
10.7 kDa
No 0
C11orf54-214
ENSP00000442094
ENST00000540113
Q9H0W9
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0008270 [zinc ion binding]
GO:0016604 [nuclear body]
GO:0016787 [hydrolase activity]
GO:0016788 [hydrolase activity, acting on ester bonds]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
Show all
296 aa
33.1 kDa
No 0
C11orf54-215
ENSP00000477694
ENST00000617482
A0A087WT99
[Direct mapping] Ester hydrolase C11orf54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0016604 [nuclear body]
Show all
256 aa
28.7 kDa
No 0

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