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GJC1
HPA
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  • GJC1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GJC1
Synonyms CX45, GJA7
Gene descriptioni

Full gene name according to HGNC.

Gap junction protein gamma 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q21.31
Chromosome location (bp) 44798448 - 44830816
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000182963 (version 109)
Entrez gene 10052
HGNC HGNC:4280
UniProt P36383 (UniProt - Evidence at protein level)
neXtProt NX_P36383
GeneCards GJC1
Antibodypedia GJC1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is a member of the connexin gene family. The encoded protein is a component of gap junctions, which are composed of arrays of intercellular channels that provide a route for the diffusion of low molecular weight materials from cell to cell. Alternatively spliced transcript variants encoding the same isoform have been described. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GJC1-201
ENSP00000333193
ENST00000330514
P36383
[Direct mapping] Gap junction gamma-1 protein
Show all
A0A654IDC0
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0006936 [muscle contraction]
GO:0007043 [cell-cell junction assembly]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0034220 [ion transmembrane transport]
GO:0045202 [synapse]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
GO:0086014 [atrial cardiac muscle cell action potential]
GO:0086020 [gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling]
GO:0086021 [SA node cell to atrial cardiac muscle cell communication by electrical coupling]
GO:0086053 [AV node cell to bundle of His cell communication by electrical coupling]
GO:0086077 [gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling]
Show all
396 aa
45.5 kDa
No 4
GJC1-202
ENSP00000467090
ENST00000586267
K7ENT9
[Direct mapping] Gap junction gamma-1 protein
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0016020 [membrane]
GO:0070161 [anchoring junction]
Show all
70 aa
8 kDa
No 1
GJC1-203
ENSP00000468258
ENST00000586347
K7ERH3
[Direct mapping] Connexin-45
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
Show all
113 aa
12.3 kDa
No 0
GJC1-204
ENSP00000468716
ENST00000587113
Q5H9P2
[Direct mapping] Gap junction protein
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0016020 [membrane]
GO:0070161 [anchoring junction]
Show all
260 aa
29.7 kDa
No 2
GJC1-205
ENSP00000467626
ENST00000587239
K7EQ14
[Direct mapping] Gap junction gamma-1 protein
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0016020 [membrane]
GO:0070161 [anchoring junction]
Show all
72 aa
8.2 kDa
No 1
GJC1-206
ENSP00000466339
ENST00000590758
P36383
[Direct mapping] Gap junction gamma-1 protein
Show all
A0A654IDC0
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0006936 [muscle contraction]
GO:0007043 [cell-cell junction assembly]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0034220 [ion transmembrane transport]
GO:0045202 [synapse]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
GO:0086014 [atrial cardiac muscle cell action potential]
GO:0086020 [gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling]
GO:0086021 [SA node cell to atrial cardiac muscle cell communication by electrical coupling]
GO:0086053 [AV node cell to bundle of His cell communication by electrical coupling]
GO:0086077 [gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling]
Show all
396 aa
45.5 kDa
No 4
GJC1-207
ENSP00000466392
ENST00000591424
K7EM78
[Direct mapping] Gap junction gamma-1 protein
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0016020 [membrane]
GO:0070161 [anchoring junction]
Show all
103 aa
11.9 kDa
No 2
GJC1-208
ENSP00000467201
ENST00000592524
P36383
[Direct mapping] Gap junction gamma-1 protein
Show all
A0A654IDC0
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0001570 [vasculogenesis]
GO:0005216 [ion channel activity]
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0006936 [muscle contraction]
GO:0007043 [cell-cell junction assembly]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007268 [chemical synaptic transmission]
GO:0007507 [heart development]
GO:0007601 [visual perception]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0034220 [ion transmembrane transport]
GO:0045202 [synapse]
GO:0048468 [cell development]
GO:0048738 [cardiac muscle tissue development]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
GO:0086014 [atrial cardiac muscle cell action potential]
GO:0086020 [gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling]
GO:0086021 [SA node cell to atrial cardiac muscle cell communication by electrical coupling]
GO:0086053 [AV node cell to bundle of His cell communication by electrical coupling]
GO:0086077 [gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling]
Show all
396 aa
45.5 kDa
No 4

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