HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:128.8 nTPM
HPA Brain:80.7 nTPM
GTEx:128.8 nTPM
FANTOM5:146.9 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:38.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 80.7
Sample id Sample description nTPM
Hippocampus
nTPM: 71.6
2529 Female, age 94, left hemisphere 88.0
1898 Male, age 80, left hemisphere 87.5
2621 Female, age 67, right hemisphere 70.9
1855 Male, age 76, left hemisphere 62.5
1911 Female, age 85, right hemisphere 62.4
2148 Female, age 91, left hemisphere 58.5
Dentate gyrus
nTPM: 70.1
2530 Female, age 94, left hemisphere 82.3
1927 Female, age 91, both hemispheres 71.6
2246 Female, age 85, both hemispheres 68.8
2531 Female, age 67, both hemispheres 68.2
2528 Male, age 74, both hemispheres 67.4
2010 Male, age 76, both hemispheres 62.3
Entorhinal gyrus
nTPM: 68.8
2764 Male, age 80, right hemisphere 81.1
1787 Male, age 76, left hemisphere 75.9
1938 Female, age 85, left hemisphere 74.3
2117 Female, age 91, right hemisphere 68.4
2613 Female, age 94, left hemisphere 62.1
2686 Male, age 75, right hemisphere 51.0
Hippocampus, CA1
nTPM: 75.7
2749 Male, age 80, left hemisphere 105.5
2527 Male, age 74, both hemispheres 73.2
2045 Male, age 76, both hemispheres 72.8
1873 Female, age 85, both hemispheres 63.9
2082 Female, age 91, right hemisphere 63.2
Hippocampus, CA2
nTPM: 68.0
1892 Male, age 76, both hemispheres 80.4
1963 Male, age 80, left hemisphere 73.8
2249 Male, age 74, both hemispheres 68.7
2437 Female, age 94, left hemisphere 66.9
2113 Female, age 91, right hemisphere 59.8
1940 Female, age 85, left hemisphere 58.2
Hippocampus, CA3
nTPM: 74.5
2436 Male, age 74, both hemispheres 84.6
2137 Male, age 80, left hemisphere 84.4
1867 Male, age 76, both hemispheres 76.8
2620 Female, age 94, left hemisphere 76.3
1891 Female, age 85, both hemispheres 62.7
2861 Female, age 67, both hemispheres 62.6
Parahippocampal cortex
nTPM: 68.5
2250 Female, age 67, right hemisphere 84.3
2245 Female, age 91, both hemispheres 78.8
1933 Female, age 85, both hemispheres 76.2
1990 Female, age 91, right hemisphere 71.7
1850 Male, age 80, both hemispheres 70.2
2532 Female, age 72, left hemisphere 67.2
2018 Male, age 76, both hemispheres 65.1
2693 Female, age 94, both hemispheres 57.5
2692 Male, age 74, both hemispheres 57.0
2622 Female, age 67, right hemisphere 56.6
Perirhinal gyrus
nTPM: 80.7
1794 Male, age 80, right hemisphere 93.5
1847 Female, age 91, left hemisphere 91.0
1841 Female, age 85, right hemisphere 79.3
2848 Male, age 76, right hemisphere 70.7
2521 Female, age 94, right hemisphere 68.8
Subiculum
nTPM: 70.2
1977 Female, age 85, both hemispheres 81.4
2619 Male, age 74, both hemispheres 76.5
1901 Male, age 80, both hemispheres 72.1
2438 Female, age 94, left hemisphere 69.6
2729 Female, age 91, right hemisphere 62.9
2042 Male, age 76, both hemispheres 58.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 128.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 128.8
Samples: 197

Max nTPM: 342.1
Min nTPM: 42.5
Std nTPM: 42.4
Median nTPM: 123.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 342.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 313.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 278.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 270.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 255.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 236.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 220.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 215.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 213.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 210.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 208.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 146.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 146.9
FF:10169-103B7 60 years, female 181.7
FF:10153-102I9 76 years, female 112.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.9
Pig sample Sample description nTPM
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 24.7
Min nTPM: 14.5
Sample A Female 24.7
Sample B Female 16.2
Sample C Male 14.5
Sample D Male 15.8
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 27.7
Min nTPM: 19.4
Sample A Female 27.7
Sample B Female 19.6
Sample C Male 20.8
Sample D Male 19.4
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 23.4
Min nTPM: 14.8
Sample A Female 21.4
Sample B Female 23.4
Sample C Male 20.4
Sample D Male 14.8
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.0
Sample A Female 21.0
Sample B Female 15.0
Sample C Male 22.1
Sample D Male 20.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 38.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.2
Samples: 4

Max nTPM: 33.9
Min nTPM: 30.5
Sample A Male 32.7
Sample B Male 30.5
Sample C Female 33.9
Sample D Female 31.7
Hippocampal formation
nTPM: 38.6
Samples: 4

Max nTPM: 41.9
Min nTPM: 36.1
Sample A Male 39.5
Sample B Male 36.1
Sample C Female 37.0
Sample D Female 41.9

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