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GABRR3
HPA
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  • GABRR3
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GABRR3
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Gamma-aminobutyric acid type A receptor subunit rho3
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at transcript level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q11.2
Chromosome location (bp) 97985102 - 98035315
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
Ensembl ENSG00000183185 (version 109)
Entrez gene 200959
HGNC HGNC:17969
UniProt A8MPY1 (UniProt - Inferred from homology)
neXtProt NX_A8MPY1
GeneCards GABRR3
Antibodypedia GABRR3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Rho subunit of the pentameric ligand-gated chloride channels responsible for mediating the effects of gamma-aminobutyric acid (GABA), the major inhibitory neurotransmitter in the brain (By similarity). Rho-containing GABA-gated chloride channels are a subclass of GABA(A) receptors (GABAARs) entirely composed of rho subunits, where GABA molecules bind at the rho intersubunit interfaces (By similarity). When activated by GABA, rho-GABAARs selectively allow the flow of chloride anions across the cell membrane down their electrochemical gradient (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chloride channel, Ion channel
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Chloride
Gene summary (Entrez)i

Useful information about the gene from Entrez

The neurotransmitter gamma-aminobutyric acid (GABA) functions in the central nervous system to regulate synaptic transmission of neurons. This gene encodes one of three related subunits, which combine as homo- or hetero-pentamers to form GABA(C) receptors. In humans, some individuals contain a single-base polymorphism (dbSNP rs832032) that is predicted to inactivate the gene product. [provided by RefSeq, Jan 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GABRR3-202
ENSP00000420790
ENST00000472788
A8MPY1
[Direct mapping] Gamma-aminobutyric acid receptor subunit rho-3
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at transcript level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0004890 [GABA-A receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005231 [excitatory extracellular ligand-gated ion channel activity]
GO:0005254 [chloride channel activity]
GO:0005575 [cellular_component]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006821 [chloride transport]
GO:0007165 [signal transduction]
GO:0007214 [gamma-aminobutyric acid signaling pathway]
GO:0007268 [chemical synaptic transmission]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030594 [neurotransmitter receptor activity]
GO:0034220 [ion transmembrane transport]
GO:0034707 [chloride channel complex]
GO:0042391 [regulation of membrane potential]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050877 [nervous system process]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:1902476 [chloride transmembrane transport]
GO:1902711 [GABA-A receptor complex]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
Show all
467 aa
54.3 kDa
Yes 4

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