PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:59.7 nTPM
FANTOM5:94.9 Scaled Tags Per Million
Pig:158.9 nTPM
Mouse:288.4 nTPM
Allen mouse:6.0 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 59.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 43.7
2090 Male, age 80, both hemispheres 49.0
2188 Female, age 91, both hemispheres 46.6
2301 Female, age 85, both hemispheres 42.7
1984 Male, age 76, both hemispheres 36.6
Area postrema
nTPM: 48.0
2799 Male, age 61, both hemispheres 52.9
2306 Male, age 80, both hemispheres 48.9
2054 Male, age 76, both hemispheres 42.1
Dorsal cochlear nucleus
nTPM: 45.4
2187 Female, age 91, both hemispheres 54.0
2378 Male, age 80, both hemispheres 48.3
2058 Male, age 76, both hemispheres 43.7
2802 Male, age 74, right hemisphere 42.0
2370 Male, age 61, both hemispheres 39.0
Dorsal medullary reticular nucleus
nTPM: 44.0
2040 Female, age 85, both hemispheres 51.5
2373 Male, age 61, both hemispheres 42.7
2088 Male, age 76, both hemispheres 37.8
Dorsal motor vagal complex
nTPM: 40.6
2133 Female, age 91, both hemispheres 46.6
2813 Female, age 72, unknown 45.6
2000 Male, age 74, unknown 43.1
2185 Male, age 76, both hemispheres 41.4
2844 Male, age 55, unknown 39.1
2797 Male, age 61, both hemispheres 37.7
2643 Male, age 74, both hemispheres 36.0
2807 Female, age 85, both hemispheres 35.5
Dorsal tegmental nucleus
nTPM: 44.5
2326 Male, age 74, both hemispheres 51.6
1936 Male, age 76, left hemisphere 44.0
2083 Male, age 80, both hemispheres 43.9
2358 Male, age 61, both hemispheres 38.3
Dorsolateral tegmental area
nTPM: 50.9
2751 Female, age 85, both hemispheres 61.6
2360 Male, age 74, both hemispheres 54.8
2654 Male, age 80, both hemispheres 50.6
2337 Male, age 61, both hemispheres 45.1
2141 Male, age 76, both hemispheres 42.3
Gigantocellular reticular nuclei, medullary
nTPM: 46.7
1876 Female, age 85, both hemispheres 54.3
2314 Male, age 61, both hemispheres 50.1
2387 Female, age 91, both hemispheres 48.7
2462 Male, age 74, both hemispheres 47.4
2022 Male, age 76, right hemisphere 40.6
2310 Male, age 80, both hemispheres 38.9
Gigantocellular reticular nuclei, pars
nTPM: 36.6
2084 Female, age 85, both hemispheres 42.2
2706 Male, age 80, both hemispheres 38.0
2336 Male, age 61, both hemispheres 36.1
2168 Male, age 76, both hemispheres 35.2
2330 Male, age 80, both hemispheres 31.6
Inferior olive
nTPM: 49.3
2085 Female, age 85, both hemispheres 56.3
2178 Male, age 61, both hemispheres 50.4
2379 Male, age 80, both hemispheres 49.6
2563 Male, age 74, both hemispheres 49.3
2628 Female, age 91, both hemispheres 41.2
Kolliker-Fuse nucleus
nTPM: 44.4
2315 Male, age 76, right hemisphere 55.9
2163 Male, age 80, both hemispheres 39.8
2793 Female, age 91, left hemisphere 37.7
Lateral lemniscal nuclei
nTPM: 41.5
2453 Male, age 74, right hemisphere 44.7
2746 Female, age 85, left hemisphere 44.3
2036 Male, age 80, both hemispheres 40.5
2169 Male, age 76, both hemispheres 40.1
2320 Female, age 91, left hemisphere 37.8
Lateral medullary reticular nucleus
nTPM: 49.7
2305 Male, age 74, both hemispheres 65.6
2190 Female, age 85, both hemispheres 53.0
2804 Female, age 91, both hemispheres 49.2
2852 Male, age 80, both hemispheres 44.8
2044 Male, age 76, both hemispheres 44.1
2374 Male, age 61, both hemispheres 41.7
Lateral parabrachial nucleus
nTPM: 46.7
2792 Male, age 76, both hemispheres 57.7
2013 Male, age 80, both hemispheres 48.0
2790 Male, age 61, both hemispheres 44.5
2139 Female, age 85, right hemisphere 36.7
Lateral vestibular nucleus
nTPM: 41.8
2311 Male, age 80, both hemispheres 49.8
2184 Male, age 76, both hemispheres 33.8
Locus coeruleus
nTPM: 46.9
2014 Male, age 55, unknown 56.9
2788 Male, age 74, unknown 50.5
1980 Male, age 76, both hemispheres 49.5
2123 Female, age 91, both hemispheres 46.2
2317 Female, age 72, unknown 43.3
2162 Male, age 80, both hemispheres 41.0
2720 Male, age 74, both hemispheres 40.8
Medial olivary nucleus
nTPM: 59.7
1962 Male, age 76, both hemispheres 66.7
1943 Male, age 61, both hemispheres 66.3
2138 Female, age 91, both hemispheres 60.6
2851 Male, age 80, both hemispheres 45.3
Medial parabrachial nucleus
nTPM: 44.7
2170 Female, age 91, both hemispheres 53.2
2854 Male, age 80, both hemispheres 45.7
2786 Male, age 76, both hemispheres 43.8
2463 Female, age 85, right hemisphere 42.1
2156 Male, age 61, both hemispheres 38.8
Medial periolivary nuclei
nTPM: 46.2
2791 Male, age 74, right hemisphere 57.8
2063 Male, age 76, both hemispheres 48.6
2081 Male, age 80, both hemispheres 47.1
2171 Female, age 85, both hemispheres 39.9
2458 Female, age 91, both hemispheres 37.6
Medial vestibular nucleus
nTPM: 45.8
2743 Female, age 85, both hemispheres 52.6
2803 Female, age 91, both hemispheres 49.8
2801 Male, age 74, both hemispheres 45.5
2134 Male, age 76, both hemispheres 43.8
2093 Male, age 80, both hemispheres 43.2
2624 Male, age 61, both hemispheres 40.0
Motor facial nucleus
nTPM: 42.3
2365 Male, age 74, right hemisphere 50.1
2062 Male, age 76, both hemispheres 47.4
2126 Male, age 61, both hemispheres 41.9
2795 Female, age 91, both hemispheres 41.9
2697 Female, age 85, both hemispheres 36.5
2327 Male, age 80, both hemispheres 35.8
Motor hypoglossal nucleus
nTPM: 44.8
2125 Female, age 91, both hemispheres 53.1
2132 Female, age 85, both hemispheres 46.2
2182 Male, age 80, both hemispheres 42.7
2461 Male, age 61, both hemispheres 41.6
2277 Male, age 76, both hemispheres 40.2
Motor trigeminal nucleus
nTPM: 40.6
2560 Male, age 74, both hemispheres 44.4
2309 Male, age 76, both hemispheres 42.2
2079 Male, age 80, both hemispheres 41.9
2321 Female, age 91, both hemispheres 38.6
2335 Male, age 61, both hemispheres 36.1
Nuclei of the trapezoid body
nTPM: 43.2
1983 Male, age 76, both hemispheres 51.5
2735 Female, age 85, both hemispheres 43.7
2159 Male, age 61, both hemispheres 42.2
2368 Female, age 91, both hemispheres 41.2
2166 Male, age 80, both hemispheres 37.4
Nucleus ambiguus
nTPM: 44.0
2071 Male, age 76, both hemispheres 63.9
2096 Female, age 85, both hemispheres 24.2
Nucleus cuneatus
nTPM: 40.8
2808 Female, age 85, both hemispheres 49.1
2380 Male, age 80, both hemispheres 49.0
2376 Male, age 61, both hemispheres 47.9
2564 Male, age 74, both hemispheres 44.8
2562 Male, age 61, both hemispheres 40.3
2381 Male, age 80, both hemispheres 38.0
2131 Male, age 76, both hemispheres 33.9
2100 Male, age 76, both hemispheres 33.8
2805 Female, age 91, both hemispheres 30.1
Nucleus gracilis
nTPM: 45.9
2627 Male, age 74, both hemispheres 48.6
2382 Male, age 80, both hemispheres 45.4
2299 Female, age 85, both hemispheres 43.8
Nucleus raphe magnus
nTPM: 42.1
2455 Male, age 74, both hemispheres 47.0
2459 Female, age 91, both hemispheres 46.2
2160 Male, age 61, both hemispheres 44.3
2051 Male, age 76, both hemispheres 41.7
2328 Male, age 80, both hemispheres 38.8
2172 Female, age 85, both hemispheres 34.8
Nucleus raphe obscurus
nTPM: 55.7
2845 Female, age 85, midline 59.9
2142 Male, age 76, midline 56.4
2800 Male, age 61, midline 50.7
Nucleus raphe pallidus
nTPM: 58.9
1924 Male, age 61, midline 66.3
2145 Male, age 76, midline 61.7
2183 Male, age 80, midline 48.7
Nucleus tractus solitarii
nTPM: 46.9
2144 Female, age 91, right hemisphere 73.6
2191 Female, age 85, both hemispheres 42.2
2656 Male, age 76, both hemispheres 41.9
2307 Male, age 80, both hemispheres 30.0
Paramedian reticular nucleus
nTPM: 50.3
2052 Male, age 76, both hemispheres 55.4
2313 Male, age 61, both hemispheres 54.2
2057 Male, age 80, both hemispheres 50.8
2050 Female, age 85, both hemispheres 41.0
Parvicellular reticular nuclei
nTPM: 44.1
2119 Male, age 80, both hemispheres 51.0
2095 Male, age 76, both hemispheres 47.7
2558 Male, age 74, both hemispheres 33.5
Parvicellular reticular nuclei, medullary
nTPM: 41.6
2189 Female, age 91, both hemispheres 43.4
2091 Female, age 85, both hemispheres 40.8
2181 Male, age 80, left hemisphere 40.6
Pedunculopontine tegmental nucleus
nTPM: 48.3
2338 Male, age 61, both hemispheres 51.0
2334 Male, age 80, both hemispheres 47.5
1921 Female, age 85, both hemispheres 46.4
Peritrigeminal nucleus
nTPM: 52.8
2067 Female, age 85, both hemispheres 55.7
2136 Male, age 76, both hemispheres 53.3
2179 Male, age 61, both hemispheres 49.5
Pontine nuclei
nTPM: 47.5
2454 Male, age 74, left hemisphere 55.7
2109 Female, age 72, unknown 54.2
2727 Male, age 61, right hemisphere 52.2
2319 Female, age 91, both hemispheres 49.7
1863 Male, age 55, unknown 46.9
1968 Male, age 76, left hemisphere 45.2
2115 Male, age 80, left hemisphere 40.2
2787 Female, age 85, both hemispheres 36.3
Pontine raphe nucleus
nTPM: 46.1
2122 Female, age 85, midline 46.5
2853 Male, age 76, midline 45.7
Posteroventral cochlear nucleus
nTPM: 52.3
2341 Male, age 80, both hemispheres 58.6
2135 Female, age 91, both hemispheres 55.8
2371 Male, age 61, both hemispheres 50.4
2070 Male, age 76, both hemispheres 50.3
2752 Female, age 85, both hemispheres 46.4
Prepositus hypoglossal nucleus
nTPM: 53.7
2855 Female, age 85, right hemisphere 60.0
2086 Male, age 80, both hemispheres 47.3
Principal sensory trigeminal nucleus
nTPM: 41.6
2367 Female, age 91, left hemisphere 44.0
2324 Male, age 76, both hemispheres 41.8
2158 Male, age 61, both hemispheres 41.0
2008 Male, age 80, left hemisphere 39.5
Reticular pontine nucleus, caudal
nTPM: 40.6
2559 Male, age 74, both hemispheres 47.2
2092 Male, age 76, both hemispheres 45.7
2457 Female, age 91, both hemispheres 39.8
2332 Male, age 80, right hemisphere 29.8
Reticular pontine nucleus, oral
nTPM: 45.4
1939 Male, age 80, both hemispheres 52.0
2012 Female, age 85, both hemispheres 46.3
2167 Male, age 76, both hemispheres 45.4
2361 Male, age 74, both hemispheres 42.8
2366 Female, age 91, both hemispheres 40.6
Reticulotegmental nucleus
nTPM: 40.7
2322 Female, age 91, both hemispheres 42.2
2333 Male, age 80, both hemispheres 40.8
2452 Male, age 74, both hemispheres 40.4
2325 Male, age 76, both hemispheres 39.4
Spinal trigeminal nucleus, caudal
nTPM: 43.3
2312 Male, age 61, both hemispheres 49.4
2390 Female, age 91, both hemispheres 46.1
2308 Male, age 80, both hemispheres 42.2
2447 Male, age 76, both hemispheres 40.1
2642 Male, age 74, both hemispheres 38.7
Spinal trigeminal nucleus, interpolar
nTPM: 45.8
2066 Male, age 76, right hemisphere 52.3
2625 Male, age 61, both hemispheres 47.7
2386 Female, age 85, both hemispheres 47.6
2033 Male, age 80, both hemispheres 44.8
2389 Female, age 91, both hemispheres 36.7
Spinal trigeminal nucleus, oral
nTPM: 42.6
1978 Male, age 76, both hemispheres 45.1
2737 Female, age 85, both hemispheres 44.1
2164 Male, age 80, both hemispheres 38.7
Spinal vestibular nucleus
nTPM: 43.9
2806 Female, age 85, both hemispheres 49.2
2186 Female, age 91, both hemispheres 46.4
2748 Male, age 76, both hemispheres 44.9
2384 Male, age 74, both hemispheres 43.0
2780 Male, age 80, both hemispheres 40.2
2796 Male, age 61, both hemispheres 39.6
Subcoeruleus area
nTPM: 45.7
2369 Female, age 85, left hemisphere 63.3
1958 Male, age 80, both hemispheres 44.2
2323 Female, age 91, left hemisphere 42.4
2451 Male, age 74, both hemispheres 41.9
2089 Male, age 76, left hemisphere 36.6
Superior olive
nTPM: 41.8
2364 Male, age 74, right hemisphere 52.5
2020 Male, age 76, both hemispheres 46.4
1875 Female, age 85, both hemispheres 43.3
2329 Male, age 80, right hemisphere 34.8
2561 Female, age 91, both hemispheres 32.0
Superior vestibular nucleus
nTPM: 52.5
2383 Male, age 74, both hemispheres 61.3
2015 Male, age 80, both hemispheres 50.6
2061 Male, age 76, both hemispheres 45.7
Ventral medullary reticular nucleus
nTPM: 49.3
2372 Male, age 61, both hemispheres 56.3
2060 Male, age 76, both hemispheres 42.4
Ventral periolivary nuclei
nTPM: 38.4
2023 Male, age 76, both hemispheres 50.7
2165 Male, age 80, both hemispheres 38.0
2130 Female, age 85, both hemispheres 32.8
2794 Female, age 91, left hemisphere 32.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 52.1
2118 Male, age 80, both hemispheres 54.6
2741 Female, age 85, both hemispheres 53.2
1986 Male, age 76, both hemispheres 53.1
2180 Male, age 61, both hemispheres 50.9
2302 Female, age 91, both hemispheres 48.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 45.0
2359 Male, age 61, both hemispheres 50.6
2840 Female, age 85, both hemispheres 44.6
1959 Male, age 76, both hemispheres 44.3
2456 Female, age 91, both hemispheres 43.8
2161 Male, age 80, both hemispheres 43.6
2449 Male, age 74, both hemispheres 43.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 94.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 82.9
FF:10165-103B3 76 years, female 99.8
FF:10182-103D2 60 years, female 65.9
Medulla oblongata
Scaled Tags Per Million: 85.2
FF:10174-103C3 60 years, female 92.6
FF:10155-103A2 76 years, female 83.9
FF:10038-101F2 18-64 years, mixed 79.2
Pons
Scaled Tags Per Million: 94.9
FF:10033-101E6 18-54 years, mixed 94.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 158.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 158.9
Samples: 4

Max nTPM: 185.4
Min nTPM: 128.4
Sample A Female 168.7
Sample B Female 128.4
Sample C Male 152.9
Sample D Male 185.4
Pons
nTPM: 145.8
Samples: 4

Max nTPM: 158.6
Min nTPM: 113.0
Sample A Female 158.2
Sample B Female 113.0
Sample C Male 158.6
Sample D Male 153.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 288.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 288.4
Samples: 4

Max nTPM: 299.8
Min nTPM: 278.0
Sample A Male 278.0
Sample B Male 279.4
Sample C Female 299.8
Sample D Female 296.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.0
671225 Antisense, RP_040914_01_G11, Mouse strain C57BL/6J (56 days, male) 6.0
Pons
Expression energy: 5.2
671225 Antisense, RP_040914_01_G11, Mouse strain C57BL/6J (56 days, male) 5.2

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