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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:471.0 nTPM
HPA Brain:991.5 nTPM
GTEx:471.0 nTPM
FANTOM5:145.6 Scaled Tags Per Million
Pig:164.1 nTPM
Mouse:280.8 nTPM
Allen mouse:8.9 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042594Antibody HPA048487
Glial cells Not detectedNot detected
Neuronal cells MediumLow




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

991.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 686.9
2290 Female, age 72, unknown 1087.5
2846 Female, age 79, unknown 793.7
2288 Male, age 75, left hemisphere 767.9
2289 Male, age 61, right hemisphere 729.2
1854 Male, age 80, left hemisphere 572.0
1857 Female, age 85, left hemisphere 536.2
2481 Female, age 94, left hemisphere 524.1
1781 Male, age 74, unknown 484.5
Globus pallidus, externus
nTPM: 114.9
2646 Male, age 61, right hemisphere 203.7
2395 Male, age 75, both hemispheres 136.8
2567 Female, age 72, unknown 130.2
2772 Female, age 79, unknown 53.6
1996 Male, age 80, right hemisphere 50.3
Globus pallidus, internus
nTPM: 90.1
2483 Female, age 94, right hemisphere 342.0
2566 Female, age 72, unknown 69.0
2287 Male, age 75, right hemisphere 59.8
1818 Male, age 74, unknown 54.2
2037 Male, age 80, right hemisphere 43.6
2778 Female, age 91, both hemispheres 35.1
2111 Female, age 85, right hemisphere 26.8
Nucleus accumbens
nTPM: 558.8
1856 Female, age 91, right hemisphere 911.3
1783 Male, age 74, unknown 750.3
2824 Male, age 61, right hemisphere 727.5
2286 Male, age 75, left hemisphere 679.9
2698 Female, age 72, unknown 451.6
2391 Female, age 94, left hemisphere 420.0
1806 Female, age 85, left hemisphere 415.8
2732 Male, age 80, right hemisphere 113.9
Nucleus basalis of Meynert
nTPM: 622.3
2484 Female, age 94, left hemisphere 821.8
2821 Male, age 75, both hemispheres 677.9
2393 Male, age 80, right hemisphere 669.1
2569 Male, age 61, both hemispheres 320.5
Nucleus of the diagonal band
nTPM: 16.2
1812 Female, age 91, both hemispheres 46.3
1979 Male, age 74, unknown 19.2
2029 Male, age 61, right hemisphere 7.3
2775 Male, age 80, right hemisphere 4.4
2195 Female, age 85, both hemispheres 3.9
Putamen
nTPM: 991.5
2489 Female, age 72, unknown 1508.3
2647 Male, age 75, left hemisphere 1414.9
1829 Male, age 74, unknown 1004.5
1937 Female, age 91, right hemisphere 888.9
2466 Female, age 79, unknown 746.6
1838 Male, age 80, right hemisphere 726.6
2482 Female, age 94, left hemisphere 651.1
Septal nuclei
nTPM: 11.5
2394 Male, age 61, left hemisphere 37.3
2629 Female, age 94, right hemisphere 10.7
1960 Male, age 74, unknown 9.9
2199 Male, age 80, right hemisphere 6.6
2009 Female, age 91, both hemispheres 6.4
2059 Female, age 85, both hemispheres 4.7
2031 Female, age 72, unknown 4.6
Stria terminalis, bed nucleus
nTPM: 44.9
2486 Female, age 94, both hemispheres 109.6
2201 Male, age 74, unknown 16.9
1974 Female, age 91, both hemispheres 8.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

471.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 439.1
Samples: 246

Max nTPM: 1044.5
Min nTPM: 2.9
Std nTPM: 205.5
Median nTPM: 442.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1044.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 949.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 943.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 936.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 927.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 924.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 899.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 865.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 827.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 810.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 809.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 803.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 782.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 770.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 749.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 744.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 743.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 743.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 735.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 731.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 714.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 710.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 700.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 696.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 694.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 685.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 682.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 680.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 679.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 673.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 670.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 667.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 663.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 663.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 657.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 653.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 651.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 650.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 649.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 647.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 639.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 635.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 632.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 629.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 627.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 627.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 619.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 617.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 609.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 607.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 606.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 605.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 603.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 602.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 602.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 599.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 598.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 596.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 593.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 593.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 589.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 588.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 580.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 578.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 577.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 576.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 569.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 568.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 567.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 564.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 562.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 561.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 559.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 558.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 555.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 555.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 554.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 554.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 547.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 544.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 543.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 538.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 532.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 531.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 530.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 527.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 525.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 522.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 515.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 509.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 507.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 505.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 502.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 499.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 499.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 495.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 491.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 490.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 488.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 486.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 485.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 483.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 482.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 480.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 479.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 479.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 478.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 478.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 477.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 476.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 474.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 466.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 464.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 464.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 456.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 453.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 453.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 451.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 449.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 448.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 447.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 446.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 444.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 441.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 438.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 435.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 427.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 423.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 421.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 416.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 416.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 416.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 415.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 415.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 411.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 411.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 408.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 407.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 404.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 401.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 401.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 400.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 400.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 397.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 394.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 393.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 389.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 387.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 383.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 382.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 381.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 378.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 377.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 365.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 363.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 356.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 356.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 354.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 349.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 349.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 347.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 346.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 343.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 334.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 333.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 332.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 329.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 327.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 312.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 309.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 303.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 303.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 301.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 299.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 299.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 296.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 296.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 295.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 292.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 292.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 289.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 275.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 273.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 272.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 272.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 268.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 261.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 259.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 256.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 255.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 246.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 242.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 239.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 236.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 236.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 233.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 232.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 230.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 227.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 223.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 222.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 220.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 218.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 216.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 214.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 212.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 210.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 208.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 206.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 206.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 204.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 204.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 200.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 200.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 192.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 188.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 185.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 183.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 180.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 179.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 177.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 175.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 173.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 172.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 166.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 160.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 154.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 150.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 146.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 145.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 144.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 143.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 139.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 136.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 125.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 118.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 118.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 118.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 89.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 84.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 84.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 70.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 64.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 2.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 315.5
Samples: 246

Max nTPM: 806.4
Min nTPM: 2.7
Std nTPM: 150.9
Median nTPM: 324.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 806.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 748.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 704.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 703.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 678.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 647.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 625.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 615.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 567.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 553.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 545.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 545.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 541.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 539.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 536.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 536.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 528.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 526.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 526.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 526.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 522.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 516.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 514.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 512.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 510.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 509.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 502.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 494.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 490.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 488.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 487.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 487.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 481.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 477.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 476.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 476.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 475.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 474.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 472.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 471.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 471.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 465.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 461.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 458.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 454.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 450.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 447.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 446.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 441.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 435.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 427.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 426.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 418.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 415.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 415.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 411.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 409.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 405.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 403.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 399.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 398.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 397.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 396.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 395.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 393.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 392.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 392.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 390.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 388.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 388.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 386.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 385.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 383.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 382.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 381.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 380.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 380.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 379.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 379.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 379.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 378.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 373.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 373.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 373.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 369.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 367.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 359.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 359.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 359.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 357.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 355.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 353.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 352.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 351.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 351.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 350.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 350.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 350.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 349.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 349.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 347.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 345.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 344.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 342.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 340.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 339.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 339.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 338.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 337.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 337.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 337.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 335.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 334.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 332.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 332.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 332.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 330.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 329.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 327.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 327.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 327.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 325.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 324.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 324.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 323.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 322.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 321.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 317.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 316.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 316.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 315.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 309.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 309.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 308.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 308.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 307.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 307.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 306.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 305.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 305.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 302.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 298.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 297.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 297.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 293.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 291.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 289.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 285.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 281.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 281.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 279.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 279.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 278.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 277.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 277.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 275.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 274.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 272.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 271.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 271.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 269.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 265.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 264.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 261.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 260.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 259.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 256.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 256.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 254.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 254.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 248.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 247.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 245.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 244.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 243.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 240.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 240.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 239.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 236.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 230.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 230.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 228.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 228.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 225.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 222.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 220.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 218.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 218.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 216.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 211.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 210.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 206.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 203.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 203.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 201.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 199.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 197.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 196.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 185.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 184.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 179.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 177.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 176.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 169.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 167.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 163.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 154.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 149.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 149.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 147.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 138.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 134.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 128.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 126.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 125.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 122.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 118.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 117.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 113.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 112.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 109.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 108.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 99.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 98.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 98.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 94.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 91.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 90.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 80.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 69.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 62.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 58.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 54.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 51.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 38.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 24.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 22.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 22.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 17.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 15.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 6.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 4.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.7
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Brain - Putamen (basal ganglia)
Average nTPM: 471.0
Samples: 205

Max nTPM: 1182.7
Min nTPM: 58.8
Std nTPM: 218.5
Median nTPM: 461.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1182.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 999.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 994.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 973.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 972.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 923.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 903.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 899.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 879.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 875.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 872.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 864.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 861.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 828.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 824.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 822.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 796.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 767.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 760.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 759.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 753.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 749.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 731.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 729.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 727.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 720.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 720.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 715.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 712.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 706.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 695.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 681.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 680.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 673.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 671.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 664.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 661.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 658.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 657.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 650.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 635.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 632.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 629.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 628.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 624.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 624.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 622.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 621.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 620.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 613.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 610.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 606.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 606.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 602.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 601.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 594.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 593.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 591.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 590.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 588.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 585.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 585.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 575.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 566.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 565.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 564.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 560.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 553.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 553.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 543.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 542.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 539.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 538.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 535.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 535.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 533.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 531.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 529.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 529.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 527.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 524.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 521.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 521.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 516.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 516.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 512.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 509.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 504.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 504.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 502.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 501.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 499.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 486.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 485.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 483.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 478.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 476.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 476.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 463.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 463.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 463.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 462.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 461.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 461.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 461.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 456.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 456.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 455.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 454.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 454.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 452.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 451.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 450.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 448.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 445.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 438.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 436.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 436.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 435.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 433.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 433.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 430.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 428.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 423.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 407.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 405.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 398.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 396.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 395.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 389.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 389.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 387.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 384.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 381.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 379.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 368.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 367.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 367.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 367.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 364.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 362.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 357.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 357.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 347.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 342.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 338.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 338.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 336.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 332.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 332.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 329.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 326.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 322.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 322.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 318.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 314.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 314.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 313.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 311.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 299.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 292.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 288.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 284.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 279.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 278.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 274.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 274.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 268.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 259.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 243.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 230.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 223.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 220.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 206.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 195.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 195.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 193.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 188.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 184.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 182.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 182.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 181.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 181.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 177.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 177.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 172.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 170.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 170.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 164.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 162.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 157.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 151.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 150.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 139.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 135.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 131.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 116.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 115.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 113.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 93.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 92.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 66.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 64.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 59.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 58.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

145.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 145.6
FF:10164-103B2 76 years, female 145.6
Nucleus accumbens
Scaled Tags Per Million: 80.8
FF:10037-101F1 23-56 years, mixed 80.8
Putamen
Scaled Tags Per Million: 130.3
FF:10176-103C5 60 years, female 130.3
Globus pallidus
Scaled Tags Per Million: 36.7
FF:10175-103C4 60 years, female 45.5
FF:10161-103A8 76 years, female 27.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.1
Pig sample Sample description nTPM
Caudate
nTPM: 124.0
Samples: 4

Max nTPM: 184.6
Min nTPM: 68.9
Sample A Female 68.9
Sample B Female 111.0
Sample C Male 184.6
Sample D Male 131.5
Putamen
nTPM: 164.1
Samples: 4

Max nTPM: 287.1
Min nTPM: 26.0
Sample A Female 26.0
Sample B Female 167.7
Sample C Male 287.1
Sample D Male 175.7
Septum
nTPM: 13.4
Samples: 4

Max nTPM: 23.3
Min nTPM: 2.6
Sample A Female 13.1
Sample B Female 23.3
Sample C Male 14.7
Sample D Male 2.6
Ventral pallidum
nTPM: 40.9
Samples: 4

Max nTPM: 76.8
Min nTPM: 14.6
Sample A Female 34.5
Sample B Female 76.8
Sample C Male 14.6
Sample D Male 37.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

280.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 280.8
Samples: 4

Max nTPM: 348.6
Min nTPM: 216.6
Sample A Male 302.5
Sample B Male 348.6
Sample C Female 216.6
Sample D Female 255.5
Septum
nTPM: 16.8
Samples: 4

Max nTPM: 26.1
Min nTPM: 11.3
Sample A Male 15.7
Sample B Male 14.0
Sample C Female 11.3
Sample D Female 26.1
Ventral forebrain
nTPM: 71.9
Samples: 4

Max nTPM: 77.1
Min nTPM: 61.8
Sample A Male 77.1
Sample B Male 72.1
Sample C Female 76.4
Sample D Female 61.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.9
71213653 Antisense, RP_050816_04_C12, Mouse strain C57BL/6J (56 days, male) 8.9
73636032 Antisense, RP_050816_04_C12, Mouse strain C57BL/6J (56 days, male) 8.4
Pallidum
Expression energy: 1.0
73636032 Antisense, RP_050816_04_C12, Mouse strain C57BL/6J (56 days, male) 1.0
71213653 Antisense, RP_050816_04_C12, Mouse strain C57BL/6J (56 days, male) 0.9

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