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NDUFB1
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  • NDUFB1
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:219.5 nTPM
HPA:150.2 nTPM
GTEx:219.5 nTPM
FANTOM5:68.7 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA063737
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.2
overview
Male, age 65
Small intestine sample 232
nTPM: 152.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 157.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 133.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 157

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.5
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 219.5
Samples: 187

Max nTPM: 417.1
Min nTPM: 109.1
Std nTPM: 57.8
Median nTPM: 209.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 417.1
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 398.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 366.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 352.0
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 346.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 335.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 333.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 330.4
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 323.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 319.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 319.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 312.6
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 312.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 311.6
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 309.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 308.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 306.7
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 300.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 300.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 294.1
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 292.7
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 291.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 289.4
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 287.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 285.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 285.6
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 285.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 282.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 280.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 278.2
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 277.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 276.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 275.1
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 274.8
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 271.6
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 271.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 270.1
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 270.1
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 268.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 268.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 267.6
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 266.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 264.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 263.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 263.8
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 261.3
GTEX-1192X-2526-SM-59868 50-59 years, male 258.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 257.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 256.9
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 256.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 255.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 255.3
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 255.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 254.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 253.3
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 252.9
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 249.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 248.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 248.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 245.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 245.1
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 244.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 243.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 242.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 241.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 240.8
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 240.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 235.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 234.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 234.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 231.7
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 231.6
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 229.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 228.0
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 227.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 227.6
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 227.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 223.8
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 223.3
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 221.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 221.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 220.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 219.2
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 218.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 218.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 218.2
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 218.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 216.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 215.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 213.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 212.2
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 211.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 210.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 209.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 209.5
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 209.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 207.8
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 207.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 206.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 206.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 205.9
GTEX-13111-1426-SM-5DUW3 50-59 years, male 205.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 204.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 202.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 202.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 201.3
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 200.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 199.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 198.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 198.1
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 197.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 197.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 197.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 196.5
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 192.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 191.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 190.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 190.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 189.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 189.7
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 189.7
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 189.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 187.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 186.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 185.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 184.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 184.1
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 183.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 181.5
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 181.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 180.3
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 180.0
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 179.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 179.0
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 178.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 178.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 178.0
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 177.5
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 175.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 174.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 174.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 172.1
GTEX-13O61-1326-SM-5KM31 60-69 years, male 171.4
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 169.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 169.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 169.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 168.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 168.2
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 168.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 167.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 166.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 166.0
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 164.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 163.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 163.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 162.3
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 161.5
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 160.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 159.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 159.6
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 159.3
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 158.8
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 157.7
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 157.7
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 155.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 155.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 153.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 151.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 151.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 149.6
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 149.4
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 146.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 146.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 146.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 145.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 143.8
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 143.8
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 143.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 142.5
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 140.8
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 137.5
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 136.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 135.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 131.4
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 117.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 115.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 109.1
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

68.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 68.7
FF:10024-101D6 15,40,85 years, mixed 68.7

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