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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:351.8 nTPM
HPA:351.8 nTPM
GTEx:349.9 nTPM
FANTOM5:49.1 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057699
Cholangiocytes Not detected
Hepatocytes High



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

351.8
N/A
Female, age 60
Liver sample 21
nTPM: 286.7
overview
Male, age 54
Liver sample 23
nTPM: 229.9
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 272.6
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 433.6
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 438.3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 311.8
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 269
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 589.9
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 370
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 316.6
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

349.9
GTEx sample id Sample description nTPM
Liver
Average nTPM: 349.9
Samples: 226

Max nTPM: 977.2
Min nTPM: 7.1
Std nTPM: 199.6
Median nTPM: 346.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 977.2
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 962.7
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 957.4
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 927.0
GTEX-11ZUS-2526-SM-59872 30-39 years, male 797.7
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 765.5
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 757.0
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 737.4
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 724.6
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 718.2
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 717.1
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 700.4
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 694.0
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 675.6
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 673.5
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 666.0
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 662.3
GTEX-18465-1626-SM-7LG6N 50-59 years, male 650.3
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 646.1
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 645.2
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 624.0
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 606.4
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 600.1
GTEX-14E7W-1526-SM-6871X 70-79 years, male 588.9
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 585.2
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 583.2
GTEX-13112-1426-SM-5EGH8 50-59 years, male 583.1
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 567.5
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 565.3
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 564.1
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 561.8
GTEX-RN64-1826-SM-48FDV 50-59 years, male 560.2
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 559.1
GTEX-11GSP-0626-SM-5986T 60-69 years, female 556.6
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 555.7
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 551.3
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 543.4
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 535.5
GTEX-14JG1-1626-SM-664NH 40-49 years, male 534.5
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 531.9
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 528.8
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 506.7
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 490.0
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 489.7
GTEX-18A7A-1526-SM-72D69 50-59 years, female 487.7
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 487.6
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 486.9
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 484.6
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 483.9
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 483.5
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 477.7
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 477.0
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 476.9
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 473.8
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 469.9
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 468.2
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 466.7
GTEX-YECK-1926-SM-4W21H 60-69 years, male 466.6
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 464.4
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 463.8
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 459.7
GTEX-1B933-1226-SM-731DW 50-59 years, female 455.6
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 452.6
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 450.5
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 449.8
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 447.0
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 444.7
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 444.5
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 443.6
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 439.2
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 437.3
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 436.1
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 431.7
GTEX-144GL-1426-SM-79OMA 50-59 years, male 427.5
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 425.6
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 422.7
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 417.5
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 416.0
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 414.8
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 414.7
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 414.6
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 413.5
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 408.8
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 408.4
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 407.8
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 406.7
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 405.0
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 403.6
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 401.5
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 401.0
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 400.8
GTEX-17F96-1226-SM-79OK2 70-79 years, male 400.5
GTEX-13113-1326-SM-5GCOI 60-69 years, female 396.5
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 389.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 389.0
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 387.8
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 385.5
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 384.7
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 383.7
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 383.4
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 381.5
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 379.9
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 379.1
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 374.1
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 369.7
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 360.4
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 359.3
GTEX-14PHX-0526-SM-664NW 50-59 years, male 354.9
GTEX-1399T-0826-SM-5IFES 60-69 years, male 354.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 353.1
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 351.4
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 348.2
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 346.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 346.5
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 340.3
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 340.1
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 339.9
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 336.1
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 335.2
GTEX-12696-0826-SM-5EGGE 60-69 years, male 333.6
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 333.6
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 325.7
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 325.7
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 325.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 323.0
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 321.7
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 320.1
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 319.3
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 309.5
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 308.9
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 306.8
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 303.9
GTEX-QESD-2026-SM-447BI 20-29 years, male 301.2
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 299.7
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 298.3
GTEX-P78B-1326-SM-3P611 40-49 years, female 296.8
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 296.7
GTEX-17HHE-0126-SM-79398 50-59 years, male 294.1
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 292.5
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 290.8
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 290.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 289.7
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 288.9
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 288.5
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 282.0
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 282.0
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 281.3
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 271.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 264.8
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 261.6
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 256.7
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 254.8
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 251.2
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 250.0
GTEX-X261-1726-SM-4PQYT 50-59 years, male 241.6
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 241.1
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 240.9
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 236.3
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 235.4
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 231.6
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 228.1
GTEX-RU72-1426-SM-46MUF 50-59 years, female 227.2
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 225.4
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 221.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 215.5
GTEX-18A66-2026-SM-7189C 60-69 years, male 206.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 202.7
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 197.8
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 196.8
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 194.4
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 183.1
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 181.6
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 179.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 179.9
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 171.6
GTEX-Q734-0326-SM-48U15 40-49 years, female 170.8
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 168.3
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 166.6
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 162.4
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 157.6
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 155.7
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 152.8
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 152.3
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 147.0
GTEX-1B932-1426-SM-793AN 40-49 years, female 143.2
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 137.3
GTEX-REY6-1226-SM-48FDR 60-69 years, male 134.7
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 133.7
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 129.7
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 127.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 126.2
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 124.6
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 122.2
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 116.1
GTEX-O5YV-0726-SM-EV798 60-69 years, female 110.6
GTEX-QEL4-1226-SM-447A4 50-59 years, male 109.5
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 108.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 106.9
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 104.2
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 101.7
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 101.2
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 99.3
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 94.5
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 93.0
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 91.2
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 90.3
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 88.2
GTEX-S33H-1626-SM-4AD68 30-39 years, male 88.0
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 87.4
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 79.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 58.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 58.5
GTEX-14PJO-1726-SM-68719 60-69 years, male 53.6
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 48.6
GTEX-S32W-1926-SM-4AD63 50-59 years, female 46.0
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 37.6
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 30.1
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 29.9
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 26.2
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 24.5
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 23.5
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 20.6
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 16.6
GTEX-14XAO-0226-SM-68728 60-69 years, female 15.6
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 9.0
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 7.1
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 49.1
FF:10018-101C9 64,69,70 years, mixed 49.1

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