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PTP4A2
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  • PTP4A2
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:204.7 nTPM
HPA Brain:502.3 nTPM
GTEx:204.7 nTPM
FANTOM5:362.4 Scaled Tags Per Million
Pig:205.8 nTPM
Mouse:102.1 nTPM
Allen mouse:0.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003281Antibody CAB011204
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

502.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 253.3
2846 Female, age 79, unknown 322.8
2288 Male, age 75, left hemisphere 291.7
2290 Female, age 72, unknown 270.2
1781 Male, age 74, unknown 267.9
2481 Female, age 94, left hemisphere 237.8
1854 Male, age 80, left hemisphere 237.7
1857 Female, age 85, left hemisphere 212.6
2289 Male, age 61, right hemisphere 185.7
Globus pallidus, externus
nTPM: 450.7
2567 Female, age 72, unknown 505.6
1996 Male, age 80, right hemisphere 488.3
2395 Male, age 75, both hemispheres 455.7
2646 Male, age 61, right hemisphere 422.4
2772 Female, age 79, unknown 381.8
Globus pallidus, internus
nTPM: 502.3
2483 Female, age 94, right hemisphere 577.6
2287 Male, age 75, right hemisphere 575.0
2111 Female, age 85, right hemisphere 557.9
2566 Female, age 72, unknown 477.8
2778 Female, age 91, both hemispheres 461.4
2037 Male, age 80, right hemisphere 437.6
1818 Male, age 74, unknown 428.7
Nucleus accumbens
nTPM: 288.3
2698 Female, age 72, unknown 385.4
2391 Female, age 94, left hemisphere 370.5
1806 Female, age 85, left hemisphere 286.8
2732 Male, age 80, right hemisphere 282.8
1783 Male, age 74, unknown 282.5
2286 Male, age 75, left hemisphere 259.4
1856 Female, age 91, right hemisphere 228.4
2824 Male, age 61, right hemisphere 210.7
Nucleus basalis of Meynert
nTPM: 315.6
2569 Male, age 61, both hemispheres 438.2
2484 Female, age 94, left hemisphere 296.6
2821 Male, age 75, both hemispheres 265.8
2393 Male, age 80, right hemisphere 262.0
Nucleus of the diagonal band
nTPM: 190.7
1812 Female, age 91, both hemispheres 225.3
2195 Female, age 85, both hemispheres 196.6
2775 Male, age 80, right hemisphere 189.9
1979 Male, age 74, unknown 187.1
2029 Male, age 61, right hemisphere 154.5
Putamen
nTPM: 268.4
1829 Male, age 74, unknown 315.6
2647 Male, age 75, left hemisphere 306.6
2489 Female, age 72, unknown 276.9
1937 Female, age 91, right hemisphere 274.5
2482 Female, age 94, left hemisphere 264.3
2466 Female, age 79, unknown 228.3
1838 Male, age 80, right hemisphere 212.8
Septal nuclei
nTPM: 209.4
2394 Male, age 61, left hemisphere 294.0
2199 Male, age 80, right hemisphere 225.1
2629 Female, age 94, right hemisphere 200.9
2031 Female, age 72, unknown 198.0
2009 Female, age 91, both hemispheres 194.5
1960 Male, age 74, unknown 180.6
2059 Female, age 85, both hemispheres 172.8
Stria terminalis, bed nucleus
nTPM: 201.2
1974 Female, age 91, both hemispheres 237.9
2201 Male, age 74, unknown 208.0
2486 Female, age 94, both hemispheres 157.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

204.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 131.6
Samples: 246

Max nTPM: 516.7
Min nTPM: 51.7
Std nTPM: 65.2
Median nTPM: 111.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 516.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 401.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 366.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 356.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 334.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 319.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 312.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 308.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 286.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 280.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 280.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 273.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 272.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 265.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 257.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 248.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 246.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 233.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 232.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 227.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 223.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 223.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 212.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 208.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 205.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 201.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 197.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 194.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 194.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 189.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 188.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 187.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 187.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 186.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 186.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 186.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 180.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 178.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 177.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 176.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 175.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 175.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 174.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 173.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 170.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 167.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 166.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 165.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 164.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 164.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 162.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 161.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 160.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 160.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 159.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 158.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 158.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 157.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 156.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 155.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 154.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 154.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 154.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 153.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 153.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 152.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 150.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 148.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 148.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 146.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 146.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 146.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 145.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 143.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 143.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 143.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 142.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 141.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 141.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 141.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 141.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 138.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 137.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 137.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 136.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 136.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 135.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 134.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 134.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 132.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 132.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 130.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 129.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 129.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 127.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 126.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 126.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 126.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 125.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 125.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 124.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 123.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 122.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 122.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 121.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 120.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 120.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 120.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 118.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 117.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 117.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 117.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 116.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 115.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 115.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 114.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 114.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 112.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 111.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 111.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 111.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 110.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 110.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 109.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 109.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 109.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 108.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 108.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 108.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 108.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 107.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 106.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 106.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 105.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 105.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 105.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 104.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 104.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 103.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 103.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 102.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 102.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 102.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 101.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 101.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 101.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 99.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 99.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 98.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 98.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 98.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 98.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 98.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 98.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 97.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 97.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 96.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 96.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 96.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 96.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 96.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 96.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 95.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 94.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 93.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 92.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 91.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 91.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 90.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 89.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 89.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 89.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 89.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 89.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 89.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 88.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 88.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 88.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 88.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 88.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 87.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 87.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 87.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 86.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 86.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 86.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 85.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 84.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 82.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 82.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 82.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 81.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 79.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 79.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 79.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 78.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 78.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 78.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 76.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 76.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 76.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 76.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 76.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 75.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 75.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 74.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 74.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 73.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 72.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 72.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 72.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 72.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 70.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 70.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 70.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 70.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 69.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 68.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 67.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 67.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 67.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 65.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 65.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 64.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 63.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 63.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 62.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 60.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 51.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 116.9
Samples: 246

Max nTPM: 741.2
Min nTPM: 50.3
Std nTPM: 81.0
Median nTPM: 91.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 741.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 540.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 488.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 481.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 402.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 370.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 328.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 298.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 271.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 254.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 252.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 246.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 246.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 245.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 236.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 226.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 226.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 223.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 218.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 218.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 215.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 207.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 203.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 203.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 197.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 195.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 194.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 194.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 188.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 183.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 180.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 178.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 177.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 177.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 172.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 170.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 160.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 159.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 156.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 156.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 153.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 152.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 152.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 148.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 148.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 147.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 143.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 142.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 142.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 141.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 140.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 138.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 136.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 134.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 134.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 134.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 133.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 133.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 133.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 132.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 132.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 130.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 128.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 128.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 128.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 128.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 125.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 122.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 122.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 122.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 121.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 120.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 117.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 116.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 116.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 114.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 113.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 113.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 113.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 113.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 112.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 112.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 111.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 110.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 110.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 110.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 108.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 107.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 107.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 106.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 106.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 105.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 105.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 105.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 104.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 104.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 104.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 103.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 102.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 101.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 101.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 100.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 100.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 100.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 99.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 98.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 98.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 97.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 97.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 97.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 97.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 97.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 96.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 95.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 95.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 95.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 95.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 93.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 93.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 93.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 92.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 91.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 91.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 91.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 90.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 90.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 89.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 89.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 88.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 88.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 87.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 87.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 87.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 86.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 86.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 85.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 85.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 84.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 84.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 84.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 83.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 83.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 83.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 83.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 82.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 82.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 81.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 81.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 81.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 80.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 80.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 80.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 80.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 80.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 80.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 80.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 79.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 79.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 79.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 79.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 79.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 78.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 78.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 78.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 78.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 77.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 77.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 77.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 77.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 77.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 77.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 77.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 76.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 76.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 76.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 75.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 75.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 74.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 74.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 73.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 73.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 73.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 73.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 72.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 72.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 71.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 71.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 71.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 71.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 71.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 70.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 70.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 70.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 70.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 70.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 70.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 70.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 69.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 69.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 69.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 68.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 68.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 68.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 68.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 67.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 67.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 67.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 67.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 67.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 66.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 65.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 65.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 64.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 64.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 63.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 63.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 63.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 63.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 63.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 63.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 63.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 62.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 62.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 62.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 62.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 62.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 62.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 61.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 61.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 60.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 60.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 59.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 59.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 59.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 59.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 56.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 56.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 54.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 54.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 53.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 52.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 51.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 50.3
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Brain - Putamen (basal ganglia)
Average nTPM: 204.7
Samples: 205

Max nTPM: 780.8
Min nTPM: 80.0
Std nTPM: 111.3
Median nTPM: 182.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 780.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 747.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 695.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 656.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 607.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 533.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 433.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 409.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 403.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 391.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 388.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 385.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 381.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 376.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 369.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 363.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 360.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 347.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 344.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 339.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 331.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 314.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 312.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 306.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 303.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 302.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 290.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 286.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 285.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 285.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 282.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 280.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 275.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 271.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 271.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 262.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 262.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 255.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 252.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 250.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 249.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 248.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 247.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 247.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 246.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 245.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 242.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 239.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 237.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 237.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 234.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 233.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 233.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 232.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 230.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 228.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 227.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 226.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 225.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 219.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 215.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 213.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 213.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 213.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 212.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 212.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 212.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 209.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 209.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 208.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 207.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 206.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 206.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 205.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 205.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 205.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 204.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 203.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 202.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 201.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 197.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 196.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 196.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 195.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 195.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 194.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 193.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 192.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 191.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 191.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 190.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 189.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 188.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 188.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 187.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 186.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 184.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 184.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 184.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 182.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 182.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 182.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 182.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 181.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 180.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 180.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 179.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 179.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 178.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 178.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 177.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 177.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 177.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 176.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 175.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 174.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 174.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 172.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 171.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 170.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 168.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 168.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 167.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 167.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 166.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 164.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 162.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 159.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 159.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 158.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 157.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 156.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 155.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 154.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 154.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 154.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 153.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 153.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 153.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 153.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 151.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 150.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 150.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 148.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 147.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 145.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 145.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 144.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 144.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 143.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 143.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 143.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 141.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 139.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 138.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 137.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 136.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 135.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 131.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 131.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 130.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 129.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 128.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 126.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 126.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 126.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 125.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 124.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 124.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 124.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 122.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 120.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 119.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 119.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 114.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 111.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 109.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 107.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 104.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 101.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 101.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 99.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 96.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 95.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 95.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 95.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 94.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 93.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 92.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 92.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 91.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 91.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 90.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 89.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 89.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 89.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 89.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 89.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 86.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 86.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 86.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 86.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 80.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 80.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 80.0
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

362.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 164.5
FF:10164-103B2 76 years, female 164.5
Nucleus accumbens
Scaled Tags Per Million: 209.1
FF:10037-101F1 23-56 years, mixed 209.1
Putamen
Scaled Tags Per Million: 166.4
FF:10176-103C5 60 years, female 166.4
Globus pallidus
Scaled Tags Per Million: 362.4
FF:10161-103A8 76 years, female 411.8
FF:10175-103C4 60 years, female 313.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.8
Pig sample Sample description nTPM
Caudate
nTPM: 127.8
Samples: 4

Max nTPM: 144.2
Min nTPM: 112.8
Sample A Female 137.2
Sample B Female 116.8
Sample C Male 144.2
Sample D Male 112.8
Putamen
nTPM: 205.8
Samples: 4

Max nTPM: 254.0
Min nTPM: 170.6
Sample A Female 221.8
Sample B Female 170.6
Sample C Male 254.0
Sample D Male 176.7
Septum
nTPM: 149.1
Samples: 4

Max nTPM: 187.4
Min nTPM: 132.7
Sample A Female 137.5
Sample B Female 132.7
Sample C Male 187.4
Sample D Male 138.7
Ventral pallidum
nTPM: 153.3
Samples: 4

Max nTPM: 181.0
Min nTPM: 119.0
Sample A Female 119.0
Sample B Female 166.7
Sample C Male 181.0
Sample D Male 146.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 102.1
Samples: 4

Max nTPM: 106.9
Min nTPM: 96.1
Sample A Male 100.6
Sample B Male 96.1
Sample C Female 104.9
Sample D Female 106.9
Septum
nTPM: 100.0
Samples: 4

Max nTPM: 105.3
Min nTPM: 91.6
Sample A Male 91.6
Sample B Male 105.3
Sample C Female 104.0
Sample D Female 99.1
Ventral forebrain
nTPM: 91.1
Samples: 4

Max nTPM: 100.3
Min nTPM: 86.3
Sample A Male 87.1
Sample B Male 90.5
Sample C Female 100.3
Sample D Female 86.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
71280538 Antisense, RP_050818_01_A11, Mouse strain C57BL/6J (56 days, male) 1.1
77799059 Antisense, RP_070212_03_E04, Mouse strain C57BL/6J (56 days, male) 0.7
70813353 Antisense, RP_050712_03_G08, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.4
71280538 Antisense, RP_050818_01_A11, Mouse strain C57BL/6J (56 days, male) 0.6
77799059 Antisense, RP_070212_03_E04, Mouse strain C57BL/6J (56 days, male) 0.5
70813353 Antisense, RP_050712_03_G08, Mouse strain C57BL/6J (56 days, male) 0.0

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