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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:217.9 nTPM
HPA Brain:150.6 nTPM
GTEx:217.9 nTPM
FANTOM5:338.5 Scaled Tags Per Million
Pig:188.9 nTPM
Mouse:76.0 nTPM
Allen mouse:13.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044133
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 122.6
1781 Male, age 74, unknown 158.0
1857 Female, age 85, left hemisphere 148.4
2846 Female, age 79, unknown 133.2
1854 Male, age 80, left hemisphere 129.0
2290 Female, age 72, unknown 125.2
2289 Male, age 61, right hemisphere 110.4
2481 Female, age 94, left hemisphere 89.9
2288 Male, age 75, left hemisphere 86.8
Globus pallidus, externus
nTPM: 48.4
2646 Male, age 61, right hemisphere 88.5
2567 Female, age 72, unknown 45.2
2772 Female, age 79, unknown 37.4
2395 Male, age 75, both hemispheres 36.4
1996 Male, age 80, right hemisphere 34.5
Globus pallidus, internus
nTPM: 44.3
2483 Female, age 94, right hemisphere 75.2
2566 Female, age 72, unknown 54.2
2778 Female, age 91, both hemispheres 45.6
2287 Male, age 75, right hemisphere 39.4
1818 Male, age 74, unknown 36.0
2037 Male, age 80, right hemisphere 34.5
2111 Female, age 85, right hemisphere 24.8
Nucleus accumbens
nTPM: 147.8
1783 Male, age 74, unknown 203.8
1856 Female, age 91, right hemisphere 195.0
2698 Female, age 72, unknown 173.2
2824 Male, age 61, right hemisphere 172.7
1806 Female, age 85, left hemisphere 164.9
2732 Male, age 80, right hemisphere 95.5
2391 Female, age 94, left hemisphere 90.8
2286 Male, age 75, left hemisphere 86.7
Nucleus basalis of Meynert
nTPM: 95.2
2569 Male, age 61, both hemispheres 103.4
2821 Male, age 75, both hemispheres 101.6
2484 Female, age 94, left hemisphere 95.6
2393 Male, age 80, right hemisphere 80.1
Nucleus of the diagonal band
nTPM: 150.6
1979 Male, age 74, unknown 170.0
2775 Male, age 80, right hemisphere 162.5
2195 Female, age 85, both hemispheres 158.3
1812 Female, age 91, both hemispheres 146.9
2029 Male, age 61, right hemisphere 115.1
Putamen
nTPM: 119.2
1838 Male, age 80, right hemisphere 175.9
1937 Female, age 91, right hemisphere 131.9
2647 Male, age 75, left hemisphere 127.0
2482 Female, age 94, left hemisphere 105.3
2466 Female, age 79, unknown 105.0
1829 Male, age 74, unknown 101.5
2489 Female, age 72, unknown 88.0
Septal nuclei
nTPM: 123.1
1960 Male, age 74, unknown 179.3
2031 Female, age 72, unknown 151.0
2059 Female, age 85, both hemispheres 121.9
2009 Female, age 91, both hemispheres 119.3
2629 Female, age 94, right hemisphere 115.0
2394 Male, age 61, left hemisphere 88.3
2199 Male, age 80, right hemisphere 87.0
Stria terminalis, bed nucleus
nTPM: 135.2
2201 Male, age 74, unknown 154.8
1974 Female, age 91, both hemispheres 145.4
2486 Female, age 94, both hemispheres 105.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 130.1
Samples: 246

Max nTPM: 338.5
Min nTPM: 35.9
Std nTPM: 58.5
Median nTPM: 121.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 338.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 325.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 296.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 283.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 280.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 279.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 265.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 261.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 253.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 249.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 246.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 233.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 232.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 228.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 223.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 220.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 218.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 217.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 217.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 214.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 213.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 212.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 206.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 206.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 206.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 205.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 204.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 203.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 203.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 201.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 200.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 199.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 195.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 194.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 194.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 193.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 188.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 187.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 187.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 186.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 185.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 185.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 185.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 184.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 183.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 183.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 182.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 181.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 181.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 179.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 179.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 178.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 178.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 178.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 176.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 176.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 176.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 176.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 175.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 174.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 173.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 173.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 171.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 171.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 170.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 169.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 168.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 166.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 162.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 161.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 160.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 159.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 158.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 157.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 155.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 155.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 152.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 149.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 149.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 149.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 148.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 148.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 148.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 148.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 147.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 146.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 144.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 144.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 143.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 142.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 142.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 141.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 140.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 138.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 136.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 133.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 132.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 131.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 130.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 130.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 129.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 128.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 128.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 128.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 128.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 127.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 127.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 126.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 126.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 126.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 125.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 124.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 123.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 123.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 123.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 122.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 122.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 122.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 121.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 121.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 121.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 121.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 121.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 120.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 120.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 120.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 120.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 120.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 119.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 118.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 118.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 118.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 118.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 117.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 117.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 116.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 115.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 115.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 115.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 113.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 111.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 111.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 110.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 110.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 109.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 109.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 109.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 108.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 108.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 107.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 107.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 107.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 106.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 104.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 102.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 102.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 102.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 101.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 101.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 100.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 100.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 99.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 99.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 97.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 97.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 95.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 95.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 95.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 94.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 94.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 93.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 92.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 92.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 92.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 91.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 90.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 88.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 86.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 85.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 85.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 85.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 85.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 85.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 84.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 83.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 82.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 81.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 80.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 80.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 79.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 79.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 78.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 77.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 76.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 76.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 74.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 74.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 71.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 71.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 71.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 71.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 70.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 70.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 69.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 68.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 66.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 65.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 64.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 63.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 63.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 63.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 63.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 63.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 62.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 60.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 59.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 59.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 56.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 54.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 53.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 50.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 48.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 46.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 44.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 43.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 43.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 41.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 40.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 38.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 35.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 217.9
Samples: 246

Max nTPM: 473.7
Min nTPM: 33.8
Std nTPM: 94.3
Median nTPM: 214.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 473.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 452.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 420.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 413.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 410.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 409.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 408.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 405.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 392.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 382.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 377.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 375.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 374.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 372.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 367.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 366.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 365.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 363.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 361.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 360.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 360.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 358.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 356.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 356.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 355.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 340.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 340.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 338.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 338.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 337.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 335.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 334.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 332.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 331.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 327.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 326.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 323.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 323.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 321.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 320.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 318.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 316.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 315.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 315.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 312.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 312.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 312.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 311.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 310.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 309.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 306.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 305.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 305.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 300.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 299.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 299.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 295.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 293.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 291.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 289.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 289.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 288.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 288.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 288.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 285.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 283.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 276.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 274.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 274.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 273.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 273.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 270.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 269.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 268.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 268.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 265.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 265.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 265.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 265.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 263.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 263.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 263.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 262.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 262.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 262.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 258.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 258.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 258.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 256.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 255.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 255.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 254.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 254.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 254.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 251.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 250.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 250.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 250.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 246.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 245.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 243.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 241.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 241.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 240.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 239.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 238.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 236.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 231.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 231.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 230.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 229.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 227.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 227.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 226.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 224.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 222.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 221.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 221.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 220.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 215.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 215.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 214.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 214.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 213.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 211.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 210.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 206.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 204.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 203.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 201.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 197.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 196.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 195.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 190.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 190.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 190.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 189.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 189.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 188.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 188.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 187.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 186.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 186.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 185.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 184.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 182.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 182.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 180.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 180.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 178.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 178.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 177.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 176.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 175.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 174.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 173.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 173.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 171.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 170.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 170.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 170.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 169.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 168.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 167.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 166.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 164.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 163.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 161.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 161.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 159.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 159.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 159.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 155.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 153.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 151.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 150.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 150.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 150.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 149.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 146.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 144.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 143.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 143.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 143.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 142.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 142.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 141.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 140.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 136.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 135.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 133.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 133.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 131.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 129.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 128.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 126.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 126.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 125.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 121.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 118.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 117.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 116.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 115.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 114.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 113.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 113.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 112.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 111.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 111.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 110.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 109.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 108.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 107.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 106.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 105.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 105.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 102.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 102.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 102.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 101.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 101.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 99.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 99.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 95.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 95.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 94.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 94.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 88.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 87.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 87.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 85.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 82.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 81.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 78.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 77.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 77.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 76.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 74.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 67.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 66.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 57.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 52.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 51.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 48.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 46.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 33.8
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Brain - Putamen (basal ganglia)
Average nTPM: 118.0
Samples: 205

Max nTPM: 317.3
Min nTPM: 25.1
Std nTPM: 57.1
Median nTPM: 111.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 317.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 305.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 255.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 248.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 234.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 229.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 227.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 227.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 225.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 224.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 224.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 221.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 221.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 219.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 218.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 214.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 213.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 205.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 203.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 203.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 199.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 198.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 198.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 198.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 198.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 197.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 196.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 190.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 189.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 186.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 181.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 179.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 177.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 176.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 175.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 174.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 173.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 172.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 172.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 172.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 168.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 164.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 161.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 159.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 159.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 157.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 156.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 156.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 155.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 155.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 155.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 154.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 153.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 152.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 152.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 151.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 150.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 148.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 148.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 147.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 146.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 143.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 142.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 142.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 140.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 140.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 138.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 137.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 136.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 136.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 136.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 135.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 135.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 132.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 132.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 129.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 129.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 125.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 124.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 124.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 123.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 122.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 122.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 122.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 122.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 121.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 120.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 120.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 120.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 120.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 120.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 119.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 119.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 115.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 115.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 114.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 113.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 113.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 112.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 112.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 111.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 111.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 111.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 109.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 107.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 107.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 107.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 105.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 104.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 104.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 102.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 100.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 100.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 100.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 99.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 98.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 97.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 95.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 95.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 94.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 93.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 92.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 92.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 92.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 91.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 90.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 90.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 89.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 88.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 88.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 88.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 87.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 85.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 84.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 82.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 81.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 81.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 81.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 81.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 81.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 81.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 80.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 78.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 78.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 77.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 76.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 75.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 74.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 74.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 73.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 73.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 73.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 71.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 71.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 70.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 69.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 67.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 66.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 66.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 66.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 65.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 64.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 64.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 64.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 63.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 61.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 61.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 59.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 59.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 58.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 58.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 57.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 57.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 56.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 56.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 55.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 55.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 55.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 54.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 54.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 52.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 51.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 50.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 50.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 50.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 50.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 48.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 48.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 47.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 46.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 46.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 42.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 40.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 40.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 39.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 39.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 38.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 36.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 31.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 29.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 25.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

338.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 185.5
FF:10164-103B2 76 years, female 185.5
Nucleus accumbens
Scaled Tags Per Million: 149.3
FF:10037-101F1 23-56 years, mixed 149.3
Putamen
Scaled Tags Per Million: 338.5
FF:10176-103C5 60 years, female 338.5
Globus pallidus
Scaled Tags Per Million: 47.1
FF:10161-103A8 76 years, female 55.0
FF:10175-103C4 60 years, female 39.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.9
Pig sample Sample description nTPM
Caudate
nTPM: 161.6
Samples: 4

Max nTPM: 175.2
Min nTPM: 149.4
Sample A Female 149.4
Sample B Female 171.6
Sample C Male 175.2
Sample D Male 150.3
Putamen
nTPM: 141.1
Samples: 4

Max nTPM: 168.7
Min nTPM: 95.9
Sample A Female 95.9
Sample B Female 142.2
Sample C Male 157.4
Sample D Male 168.7
Septum
nTPM: 189.0
Samples: 4

Max nTPM: 214.6
Min nTPM: 163.8
Sample A Female 195.2
Sample B Female 163.8
Sample C Male 214.6
Sample D Male 182.2
Ventral pallidum
nTPM: 151.6
Samples: 4

Max nTPM: 188.2
Min nTPM: 120.5
Sample A Female 188.2
Sample B Female 120.5
Sample C Male 146.6
Sample D Male 151.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 44.1
Samples: 4

Max nTPM: 46.9
Min nTPM: 41.0
Sample A Male 46.9
Sample B Male 44.3
Sample C Female 44.0
Sample D Female 41.0
Septum
nTPM: 76.0
Samples: 4

Max nTPM: 87.2
Min nTPM: 67.1
Sample A Male 87.2
Sample B Male 69.2
Sample C Female 67.1
Sample D Female 80.4
Ventral forebrain
nTPM: 46.3
Samples: 4

Max nTPM: 61.1
Min nTPM: 37.9
Sample A Male 42.0
Sample B Male 61.1
Sample C Female 37.9
Sample D Female 44.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.2
73817931 Antisense, RP_051214_01_A02, Mouse strain C57BL/6J (56 days, male) 13.8
385781 Antisense, RP_040625_01_E09, Mouse strain C57BL/6J (56 days, male) 12.6
Pallidum
Expression energy: 12.9
73817931 Antisense, RP_051214_01_A02, Mouse strain C57BL/6J (56 days, male) 14.2
385781 Antisense, RP_040625_01_E09, Mouse strain C57BL/6J (56 days, male) 11.5

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