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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:64.6 nTPM
HPA Brain:51.9 nTPM
GTEx:64.6 nTPM
FANTOM5:27.5 Scaled Tags Per Million
Pig:30.8 nTPM
Mouse:11.3 nTPM
Allen mouse:13.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047412
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 51.9
2481 Female, age 94, left hemisphere 67.0
2289 Male, age 61, right hemisphere 63.2
2288 Male, age 75, left hemisphere 59.3
1854 Male, age 80, left hemisphere 51.8
2290 Female, age 72, unknown 47.2
1857 Female, age 85, left hemisphere 46.0
2846 Female, age 79, unknown 42.9
1781 Male, age 74, unknown 37.8
Globus pallidus, externus
nTPM: 21.2
2646 Male, age 61, right hemisphere 34.1
2567 Female, age 72, unknown 25.9
2772 Female, age 79, unknown 17.8
1996 Male, age 80, right hemisphere 17.2
2395 Male, age 75, both hemispheres 11.1
Globus pallidus, internus
nTPM: 17.3
2483 Female, age 94, right hemisphere 31.9
2566 Female, age 72, unknown 23.0
2111 Female, age 85, right hemisphere 17.1
2778 Female, age 91, both hemispheres 15.1
2037 Male, age 80, right hemisphere 14.0
1818 Male, age 74, unknown 10.2
2287 Male, age 75, right hemisphere 9.7
Nucleus accumbens
nTPM: 33.8
2286 Male, age 75, left hemisphere 61.3
1783 Male, age 74, unknown 42.7
1806 Female, age 85, left hemisphere 39.6
2391 Female, age 94, left hemisphere 38.8
2824 Male, age 61, right hemisphere 33.4
2698 Female, age 72, unknown 21.0
1856 Female, age 91, right hemisphere 17.3
2732 Male, age 80, right hemisphere 16.2
Nucleus basalis of Meynert
nTPM: 32.8
2569 Male, age 61, both hemispheres 48.5
2484 Female, age 94, left hemisphere 38.1
2393 Male, age 80, right hemisphere 26.2
2821 Male, age 75, both hemispheres 18.4
Nucleus of the diagonal band
nTPM: 15.5
1979 Male, age 74, unknown 16.9
2195 Female, age 85, both hemispheres 16.8
2029 Male, age 61, right hemisphere 16.0
1812 Female, age 91, both hemispheres 14.1
2775 Male, age 80, right hemisphere 13.5
Putamen
nTPM: 49.3
2647 Male, age 75, left hemisphere 84.6
2489 Female, age 72, unknown 58.3
2482 Female, age 94, left hemisphere 50.2
2466 Female, age 79, unknown 42.6
1829 Male, age 74, unknown 42.2
1937 Female, age 91, right hemisphere 33.6
1838 Male, age 80, right hemisphere 33.5
Septal nuclei
nTPM: 19.9
1960 Male, age 74, unknown 41.6
2059 Female, age 85, both hemispheres 24.3
2031 Female, age 72, unknown 23.2
2009 Female, age 91, both hemispheres 14.9
2394 Male, age 61, left hemisphere 14.0
2629 Female, age 94, right hemisphere 12.5
2199 Male, age 80, right hemisphere 8.9
Stria terminalis, bed nucleus
nTPM: 10.5
1974 Female, age 91, both hemispheres 14.4
2486 Female, age 94, both hemispheres 13.2
2201 Male, age 74, unknown 3.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 57.4
Samples: 246

Max nTPM: 175.1
Min nTPM: 9.0
Std nTPM: 29.0
Median nTPM: 51.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 175.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 148.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 142.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 138.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 137.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 134.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 124.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 120.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 119.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 115.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 115.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 114.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 110.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 110.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 110.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 110.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 107.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 104.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 103.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 103.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 100.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 100.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 98.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 98.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 97.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 97.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 95.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 95.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 94.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 93.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 92.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 92.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 91.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 89.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 89.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 88.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 87.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 87.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 86.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 86.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 85.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 84.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 84.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 84.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 83.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 83.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 82.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 81.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 81.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 80.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 79.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 78.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 78.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 77.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 76.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 76.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 76.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 76.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 75.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 74.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 72.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 71.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 71.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 71.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 70.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 70.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 69.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 68.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 68.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 67.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 67.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 66.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 66.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 66.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 65.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 65.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 65.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 65.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 65.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 63.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 62.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 62.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 61.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 60.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 60.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 60.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 59.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 59.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 59.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 58.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 57.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 56.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 56.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 56.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 55.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 55.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 54.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 54.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 54.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 53.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 53.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 53.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 52.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 52.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 52.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 52.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 52.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 52.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 52.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 51.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 51.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 51.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 51.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 51.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 50.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 49.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 49.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 48.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 48.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 47.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 47.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 47.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 47.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 47.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 47.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 46.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 46.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 46.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 46.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 45.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 45.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 45.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 44.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 44.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 44.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 44.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 44.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 44.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 43.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 43.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 43.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 42.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 42.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 42.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 41.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 41.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 40.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 40.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 40.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 39.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 39.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 39.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 39.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 38.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 38.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 38.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 38.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 37.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 37.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 37.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 36.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 36.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 36.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 36.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 36.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 35.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 35.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 35.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 34.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 34.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 34.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 34.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 34.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 33.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 33.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 32.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 32.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 32.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 32.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 31.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 31.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 31.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 31.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 31.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 31.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 30.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 29.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 29.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 29.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 28.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 27.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 25.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 25.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 24.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 24.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 24.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 24.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 22.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 22.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 22.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 22.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 21.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 20.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 20.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 19.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 18.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 17.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 17.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 16.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 15.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 14.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 13.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 12.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 11.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 9.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 31.8
Samples: 246

Max nTPM: 136.4
Min nTPM: 3.5
Std nTPM: 19.3
Median nTPM: 27.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 136.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 110.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 101.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 90.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 84.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 83.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 80.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 80.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 79.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 73.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 72.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 71.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 69.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 67.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 66.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 63.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 62.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 62.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 61.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 60.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 60.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 59.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 59.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 59.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 58.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 56.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 56.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 56.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 56.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 50.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 50.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 49.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 49.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 49.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 49.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 48.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 48.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 47.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 46.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 46.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 46.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 45.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 45.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 45.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 45.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 44.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 44.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 44.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 44.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 43.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 43.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 42.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 42.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 42.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 42.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 41.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 41.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 41.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 41.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 40.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 39.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 39.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 39.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 38.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 38.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 38.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 37.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 37.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 36.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 36.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 35.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 35.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 35.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 35.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 35.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 35.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 35.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 35.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 35.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 35.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 35.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 35.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 35.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 34.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 34.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 34.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 34.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 34.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 34.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 33.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 33.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 33.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 32.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 32.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 32.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 32.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 31.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 31.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 30.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 30.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 30.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 30.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 30.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 30.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 30.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 29.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 29.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 29.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 29.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 29.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 29.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 28.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 28.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 28.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 28.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 28.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 28.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 28.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 27.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 27.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 27.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 27.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 27.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 27.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 26.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 26.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 26.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 25.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 25.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 25.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 25.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 25.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 25.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 25.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 25.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 24.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 24.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 24.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 24.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 23.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 23.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 23.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 23.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 23.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 23.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 23.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 23.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 23.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 22.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 22.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 22.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 22.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 22.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 22.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 22.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 22.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 21.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 21.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 21.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 21.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 21.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 21.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 20.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 20.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 20.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 19.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 19.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 19.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 19.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 19.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 19.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 18.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 18.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 18.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 18.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 18.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 18.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 17.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 17.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 17.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 17.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 17.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 17.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 17.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 17.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 17.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 17.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 17.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 16.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 16.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 16.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 16.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 16.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 16.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 16.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 16.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 16.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 16.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 16.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 15.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 15.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 15.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 15.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 15.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 15.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 14.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 14.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 14.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 14.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 14.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 13.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 13.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 13.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 13.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 12.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 12.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 12.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 12.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 12.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 12.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 11.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 10.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 9.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 9.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 9.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 9.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 9.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 8.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 8.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 8.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 8.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 7.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 6.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 6.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 5.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 3.5
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Brain - Putamen (basal ganglia)
Average nTPM: 64.6
Samples: 205

Max nTPM: 172.3
Min nTPM: 10.6
Std nTPM: 32.1
Median nTPM: 58.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 172.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 160.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 154.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 154.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 142.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 134.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 132.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 128.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 128.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 127.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 127.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 126.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 123.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 122.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 117.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 117.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 117.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 116.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 114.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 113.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 112.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 110.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 110.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 108.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 107.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 105.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 102.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 102.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 100.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 99.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 98.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 97.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 96.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 96.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 96.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 94.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 93.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 92.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 91.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 90.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 88.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 87.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 86.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 85.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 84.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 84.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 83.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 83.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 83.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 82.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 82.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 82.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 82.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 81.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 81.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 79.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 79.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 78.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 78.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 77.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 76.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 76.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 75.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 75.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 75.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 75.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 74.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 74.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 74.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 72.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 71.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 71.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 71.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 70.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 70.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 68.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 67.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 67.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 67.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 66.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 66.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 66.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 66.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 64.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 64.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 63.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 63.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 63.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 62.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 62.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 62.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 62.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 61.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 60.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 60.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 59.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 59.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 58.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 58.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 58.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 58.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 57.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 57.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 57.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 57.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 56.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 56.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 56.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 55.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 55.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 55.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 54.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 54.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 53.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 53.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 52.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 52.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 51.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 51.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 51.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 50.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 50.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 50.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 50.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 49.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 49.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 49.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 48.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 48.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 47.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 47.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 47.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 46.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 45.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 44.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 44.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 44.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 43.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 43.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 42.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 41.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 40.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 40.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 40.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 39.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 39.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 39.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 38.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 38.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 37.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 36.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 35.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 35.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 35.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 34.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 34.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 33.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 33.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 32.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 31.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 31.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 31.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 30.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 29.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 28.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 27.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 27.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 27.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 26.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 26.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 25.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 24.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 23.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 22.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 22.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 21.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 20.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 18.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 18.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 17.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 17.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 17.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 15.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 15.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 11.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.6
FF:10164-103B2 76 years, female 25.6
Nucleus accumbens
Scaled Tags Per Million: 27.5
FF:10037-101F1 23-56 years, mixed 27.5
Putamen
Scaled Tags Per Million: 26.6
FF:10176-103C5 60 years, female 26.6
Globus pallidus
Scaled Tags Per Million: 18.2
FF:10161-103A8 76 years, female 24.7
FF:10175-103C4 60 years, female 11.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.8
Pig sample Sample description nTPM
Caudate
nTPM: 30.9
Samples: 4

Max nTPM: 37.4
Min nTPM: 19.6
Sample A Female 19.6
Sample B Female 32.6
Sample C Male 37.4
Sample D Male 33.8
Putamen
nTPM: 28.2
Samples: 4

Max nTPM: 44.1
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 25.4
Sample C Male 44.1
Sample D Male 32.2
Septum
nTPM: 25.2
Samples: 4

Max nTPM: 32.0
Min nTPM: 18.0
Sample A Female 21.2
Sample B Female 29.4
Sample C Male 18.0
Sample D Male 32.0
Ventral pallidum
nTPM: 25.9
Samples: 4

Max nTPM: 31.6
Min nTPM: 20.1
Sample A Female 25.2
Sample B Female 31.6
Sample C Male 20.1
Sample D Male 26.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 11.3
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.0
Sample A Male 11.5
Sample B Male 10.2
Sample C Female 10.0
Sample D Female 13.6
Septum
nTPM: 9.8
Samples: 4

Max nTPM: 11.2
Min nTPM: 6.4
Sample A Male 6.4
Sample B Male 11.1
Sample C Female 11.2
Sample D Female 10.6
Ventral forebrain
nTPM: 10.9
Samples: 4

Max nTPM: 13.3
Min nTPM: 8.6
Sample A Male 11.5
Sample B Male 8.6
Sample C Female 13.3
Sample D Female 10.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.5
68499081 Antisense, RP_050113_02_H08, Mouse strain C57BL/6J (56 days, male) 13.5
Pallidum
Expression energy: 10.5
68499081 Antisense, RP_050113_02_H08, Mouse strain C57BL/6J (56 days, male) 10.5

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