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WDR27
HPA
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  • WDR27
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

WDR27
Synonyms MGC43690
Gene descriptioni

Full gene name according to HGNC.

WD repeat domain 27
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband q27
Chromosome location (bp) 169457212 - 169702067
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000184465 (version 109)
Entrez gene 253769
HGNC HGNC:21248
UniProt A2RRH5 (UniProt - Evidence at protein level)
neXtProt NX_A2RRH5
GeneCards WDR27
Antibodypedia WDR27 antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein with multiple WD repeats. Proteins with these repeats may form scaffolds for protein-protein interaction and play key roles in cell signalling. Alternative splicing results in multiple transcript variants, but the full-length structure of some of these variants cannot be determined. [provided by RefSeq, Nov 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
WDR27-201
ENSP00000397869
ENST00000423258
A2RRH5
[Direct mapping] WD repeat-containing protein 27
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
730 aa
79.7 kDa
No 0
WDR27-202
ENSP00000411915
ENST00000441385
H7C3H5
[Direct mapping] WD repeat-containing protein 27
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005654 [nucleoplasm]
Show all
195 aa
20.5 kDa
No 0
WDR27-203
ENSP00000416289
ENST00000448612
A2RRH5
[Direct mapping] WD repeat-containing protein 27
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
895 aa
98.1 kDa
No 0
WDR27-205
ENSP00000449696
ENST00000474018
F8VUY7
[Direct mapping] WD repeat-containing protein 27
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
88 aa
9.7 kDa
No 0
WDR27-213
ENSP00000497692
ENST00000647873
A0A3B3ITF5
[Direct mapping] WD repeat-containing protein 27
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
Show all
437 aa
47.4 kDa
No 0
WDR27-219
ENSP00000497675
ENST00000650296
A0A3B3IT90
[Direct mapping] WD repeat-containing protein 27
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
Show all
177 aa
19.5 kDa
No 0

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