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CEND1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:148.8 nTPM
FANTOM5:205.7 Scaled Tags Per Million
Pig:163.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042527
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 148.8
Samples: 246

Max nTPM: 302.6
Min nTPM: 48.6
Std nTPM: 45.6
Median nTPM: 149.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 302.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 297.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 264.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 258.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 245.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 245.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 242.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 241.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 240.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 238.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 236.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 227.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 223.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 220.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 218.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 217.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 217.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 214.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 212.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 209.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 204.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 204.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 204.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 203.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 203.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 203.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 202.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 202.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 202.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 201.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 200.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 200.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 200.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 198.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 198.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 197.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 197.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 195.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 194.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 193.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 190.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 190.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 189.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 189.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 189.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 187.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 187.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 186.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 186.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 185.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 184.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 183.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 183.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 182.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 182.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 181.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 181.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 181.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 180.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 180.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 179.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 179.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 179.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 178.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 178.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 176.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 176.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 176.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 176.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 175.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 174.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 173.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 173.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 171.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 170.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 170.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 170.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 170.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 170.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 169.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 169.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 169.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 167.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 166.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 165.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 165.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 165.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 164.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 163.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 163.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 163.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 162.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 162.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 160.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 160.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 160.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 159.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 159.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 158.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 157.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 156.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 156.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 156.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 156.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 155.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 155.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 155.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 155.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 154.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 154.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 153.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 152.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 151.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 151.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 151.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 150.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 150.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 150.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 150.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 150.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 149.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 149.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 148.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 148.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 147.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 147.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 147.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 146.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 146.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 145.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 145.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 145.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 145.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 144.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 144.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 144.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 144.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 143.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 142.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 142.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 141.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 138.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 138.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 138.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 138.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 137.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 136.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 136.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 136.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 135.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 134.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 133.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 133.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 133.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 131.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 131.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 131.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 130.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 127.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 125.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 125.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 125.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 125.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 123.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 123.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 122.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 122.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 122.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 121.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 120.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 120.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 119.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 119.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 118.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 118.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 118.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 117.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 117.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 117.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 116.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 115.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 115.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 114.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 113.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 113.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 112.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 112.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 111.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 111.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 109.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 108.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 108.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 108.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 107.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 107.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 106.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 105.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 104.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 103.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 103.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 103.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 102.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 101.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 101.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 100.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 100.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 99.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 99.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 98.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 97.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 96.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 96.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 96.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 93.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 92.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 92.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 89.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 89.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 88.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 88.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 87.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 82.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 79.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 76.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 76.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 72.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 71.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 70.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 70.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 70.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 69.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 68.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 66.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 62.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 61.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 58.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 48.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

205.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 205.7
FF:10164-103B2 76 years, female 205.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

163.7
Pig sample Sample description nTPM
Caudate
nTPM: 163.7
Samples: 4

Max nTPM: 210.3
Min nTPM: 120.8
Sample A Female 120.8
Sample B Female 175.1
Sample C Male 210.3
Sample D Male 148.5

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