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CEND1
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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

109.859
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:120.8 nTPM
HPA Brain:227.5 nTPM
GTEx:120.8 nTPM
Pig:114.4 nTPM
Mouse:227.4 nTPM
Allen mouse:19.2 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA042527
Hypothalamus mean intensity 109.859
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 82.878
Mammillary nucleus 76.205
Periventricular hypothalamic nucleus 92.290
Supraoptic nucleus 109.859
Tuberal nucleus 89.598
Ventral tuberomammillary nucleus -
Lateral preoptic area 41.870
Medial preoptic area 48.175
Suprachiasmatic nucleus 104.077
Paraventricular hypothalamic nucleus 67.791
Anterior hypothalamic area, central 84.358
Ventral medial hypothalamic nucleus 73.412
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 87.829
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 72.031
Dorsal medial hypothalamic nucleus 70.232
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

227.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 89.7
2226 Male, age 75, left hemisphere 118.9
1961 Female, age 42, unknown 60.5
Dorsomedial nucleus
nTPM: 133.3
1989 Male, age 62, unknown 237.5
2017 Female, age 42, unknown 82.2
2041 Female, age 72, unknown 80.3
Lateral hypothalamic area
nTPM: 158.7
1791 Male, age 80, right hemisphere 182.5
2228 Male, age 66, unknown 173.8
2271 Male, age 75, both hemispheres 142.6
2412 Male, age 62, unknown 135.8
Mammillary body
nTPM: 227.5
1923 Female, age 72, unknown 368.5
2413 Male, age 66, unknown 221.2
1948 Female, age 72, unknown 212.7
1834 Female, age 42, unknown 192.2
1945 Male, age 80, right hemisphere 142.7
Paraventricular nucleus
nTPM: 108.6
2700 Male, age 62, unknown 108.6
Preoptic area
nTPM: 117.6
1907 Male, age 80, right hemisphere 131.0
1861 Female, age 42, unknown 128.7
2414 Female, age 72, unknown 93.2
Supraoptic nucleus
nTPM: 96.0
2835 Female, age 72, unknown 160.9
2043 Male, age 62, unknown 68.7
1894 Female, age 72, unknown 58.4
Ventromedial nucleus
nTPM: 63.8
1982 Female, age 72, unknown 72.9
1822 Female, age 42, unknown 54.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 120.8
Samples: 202

Max nTPM: 424.8
Min nTPM: 17.7
Std nTPM: 54.8
Median nTPM: 110.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 424.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 339.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 339.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 326.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 286.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 263.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 227.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 222.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 213.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 209.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 201.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 201.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 196.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 192.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 190.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 189.5
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 180.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 179.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 177.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 177.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 176.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 174.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 173.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 168.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 167.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 166.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 162.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 162.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 160.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 160.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 159.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 159.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 158.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 158.1
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 157.3
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 155.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 155.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 155.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 155.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 154.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 154.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 154.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 150.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 149.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 149.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 148.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 148.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 147.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 146.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 146.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 145.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 144.6
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 144.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 142.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 142.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 139.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 139.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 138.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 137.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 137.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 137.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 136.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 136.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 135.6
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 135.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 135.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 133.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 133.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 133.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 133.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 132.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 131.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 130.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 128.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 128.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 127.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 126.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 125.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 124.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 124.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 123.2
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 122.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 121.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 121.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 120.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 119.6
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 119.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 118.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 118.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 118.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 117.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 116.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 114.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 114.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 114.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 113.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 113.0
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 112.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 112.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 111.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 110.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 109.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 109.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 109.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 109.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 109.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 109.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 108.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 108.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 107.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 107.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 107.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 107.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 106.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 106.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 106.3
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 105.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 105.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 104.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 104.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 104.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 103.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 102.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 102.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 101.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 100.9
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 100.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 100.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 99.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 99.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 98.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 98.5
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 98.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 97.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 97.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 96.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 96.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 96.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 95.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 95.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 94.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 94.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 91.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 91.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 90.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 90.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 89.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 89.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 89.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 88.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 87.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 87.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 86.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 85.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 85.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 85.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 85.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 84.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 84.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 84.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 84.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 83.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 83.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 82.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 81.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 81.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 80.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 80.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 79.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 78.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 77.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 76.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 76.4
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 75.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 75.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 75.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 74.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 71.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 70.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 68.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 67.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 67.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 62.0
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 61.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 59.4
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 56.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 53.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 51.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 50.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 49.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 48.9
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 42.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 41.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 40.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 39.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 28.6
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 26.9
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 20.2
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 19.8
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 17.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 114.4
Samples: 4

Max nTPM: 145.3
Min nTPM: 89.5
Sample A Female 145.3
Sample B Female 117.0
Sample C Male 105.9
Sample D Male 89.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

227.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 227.4
Samples: 4

Max nTPM: 233.5
Min nTPM: 222.2
Sample A Male 233.5
Sample B Male 227.0
Sample C Female 226.8
Sample D Female 222.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.2
68196909 Antisense, RP_041116_01_D02, Mouse strain C57BL/6J (56 days, male) 19.2

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